1     M         1.319   1.331   1.359   1.572   1.591   1.628   1.400   1.415   1.457
2     T        -0.734  -0.729  -0.852  -0.520  -0.517  -0.697  -0.673  -0.665  -0.807
3     G        -0.056   0.002  -0.037  -0.041   0.055  -0.030  -0.245  -0.151  -0.229
4     A        -0.927  -0.907  -0.923  -0.835  -0.801  -0.828  -0.913  -0.883  -0.892
5     A        -0.927  -0.907  -0.923  -0.826  -0.793  -0.824  -0.913  -0.883  -0.892
6     T        -1.054  -1.006  -0.942  -1.137  -1.031  -0.961  -1.068  -1.004  -0.915
7     A        -1.054  -1.006  -0.942  -1.003  -0.908  -0.833  -1.068  -1.004  -0.915
8     A        -1.054  -1.006  -0.942  -1.113  -0.998  -0.939  -1.068  -1.004  -0.915
9     E        -1.054  -1.006  -0.942  -1.031  -0.919  -0.861  -1.068  -1.004  -0.915
10    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
11    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
12    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
13    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
14    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
15    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
16    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
17    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
18    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
19    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
20    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
21    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
22    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
23    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
24    N        -0.927  -0.907  -0.923  -0.894  -0.858  -0.943  -0.913  -0.883  -0.892
25    S        -0.927  -0.930  -0.891  -0.739  -0.744  -0.699  -0.913  -0.912  -0.854
26    A        -2.157  -2.141  -2.012  -1.777  -1.750  -1.573  -1.561  -1.538  -1.389
27    T        -1.558  -1.495  -1.494  -1.344  -1.258  -1.241  -1.265  -1.194  -1.165
28    Q        -0.734  -0.691  -0.852  -0.410  -0.348  -0.591  -0.673  -0.616  -0.808
29    L         1.319   1.331   1.359   1.018   1.024   1.098   1.400   1.415   1.457
30    E         0.238   0.179   0.012   0.334   0.258   0.013   0.215   0.128  -0.146
31    F        -0.960  -0.954  -0.927  -1.151  -1.176  -1.085  -0.969  -0.952  -0.898
32    Y         1.319   1.331   1.359   1.396   1.415   1.459   1.400   1.415   1.457
33    R         0.238   0.179   0.012   0.495   0.412   0.146   0.215   0.128  -0.146
34    K        -0.135  -0.150  -0.088  -0.380  -0.418  -0.329  -0.377  -0.403  -0.314
35    A         0.238   0.179   0.012   0.483   0.405   0.136   0.215   0.128  -0.146
36    L         1.319   1.331   1.359   1.018   1.024   1.098   1.400   1.415   1.457
37    N         1.319   1.331   1.359   1.145   1.166   1.219   1.400   1.415   1.457
38    F         1.319   1.331   1.359   1.449   1.462   1.511   1.400   1.415   1.457
39    N         1.319   1.331   1.359   1.145   1.166   1.219   1.400   1.415   1.457
40    V         1.319   1.331   1.359   1.354   1.376   1.419   1.400   1.415   1.457
41    I         1.319   1.331   1.359   1.311   1.331   1.379   1.400   1.415   1.457
42    G        -0.960  -0.954  -0.927  -0.866  -0.851  -0.798  -0.969  -0.952  -0.898
43    R         1.319   1.331   1.359   1.479   1.495   1.539   1.400   1.415   1.457
44    Y         1.319   1.331   1.359   1.396   1.415   1.459   1.400   1.415   1.457
45    D         1.319   1.331   1.359   1.329   1.346   1.396   1.400   1.415   1.457
46    P         0.238   0.217   0.015   0.456   0.428   0.085   0.215   0.185  -0.141
47    K        -0.734  -0.802  -0.899  -0.536  -0.627  -0.768  -0.673  -0.753  -0.864
48    I         1.319   1.331   1.359   1.311   1.331   1.379   1.400   1.415   1.457
49    K         1.319   1.331   1.359   1.342   1.364   1.408   1.400   1.415   1.457
50    Q         1.319   1.331   1.359   1.508   1.525   1.567   1.400   1.415   1.457
51    L         1.319   1.331   1.359   1.018   1.024   1.098   1.400   1.415   1.457
52    L         1.319   1.331   1.359   1.018   1.024   1.098   1.400   1.415   1.457
53    F        -0.734  -0.802  -0.899  -0.405  -0.500  -0.641  -0.673  -0.753  -0.864
54    H         0.238   0.179   0.012   0.533   0.445   0.113   0.215   0.128  -0.146
55    T         1.319   1.331   1.359   1.443   1.457   1.505   1.400   1.415   1.457
56    P        -0.135  -0.150  -0.088  -0.136  -0.172  -0.081  -0.377  -0.403  -0.314
57    H         1.319   1.331   1.359   1.590   1.609   1.645   1.400   1.415   1.457
58    A        -0.135  -0.150  -0.088  -0.003  -0.023   0.072  -0.377  -0.403  -0.314
59    S        -0.960  -0.954  -0.927  -0.920  -0.905  -0.850  -0.969  -0.952  -0.898
60    L        -0.960  -0.966  -0.904  -1.224  -1.238  -1.132  -0.969  -0.967  -0.872
61    Y         1.319   1.331   1.359   1.396   1.415   1.459   1.400   1.415   1.457
62    K         0.238   0.179   0.012   0.287   0.203  -0.107   0.215   0.128  -0.146
63    W        -0.135  -0.150  -0.088   0.022  -0.017   0.066  -0.377  -0.403  -0.314
64    D        -0.960  -0.954  -0.927  -1.110  -1.101  -1.026  -0.969  -0.952  -0.898
65    F        -0.927  -0.907  -0.923  -0.888  -0.855  -0.886  -0.913  -0.883  -0.892
66    K         0.104   0.121  -0.004   0.117   0.143  -0.065   0.012   0.037  -0.174
67    K        -1.558  -1.490  -1.528  -1.291  -1.189  -1.263  -1.265  -1.189  -1.197
68    D        -0.734  -0.802  -0.899  -0.580  -0.679  -0.826  -0.673  -0.753  -0.864
69    E         0.238   0.226   0.022   0.251   0.237  -0.120   0.215   0.198  -0.130
70    W         1.319   1.331   1.359   1.613   1.631   1.667   1.400   1.415   1.457
71    N        -0.960  -0.912  -0.924  -1.075  -0.998  -0.982  -0.969  -0.913  -0.895
72    K         1.319   1.331   1.359   1.342   1.364   1.408   1.400   1.415   1.457
73    L        -0.734  -0.802  -0.899  -0.873  -0.977  -1.053  -0.673  -0.753  -0.864
74    E        -0.135  -0.150  -0.088  -0.306  -0.336  -0.236  -0.377  -0.403  -0.314
75    Y         0.238   0.179   0.012   0.415   0.336   0.077   0.215   0.128  -0.146
76    Q         1.319   1.331   1.359   1.508   1.525   1.567   1.400   1.415   1.457
77    G         1.319   1.331   1.359   1.420   1.442   1.482   1.400   1.415   1.457
78    V        -0.135  -0.150  -0.088  -0.200  -0.224  -0.126  -0.377  -0.403  -0.314
79    L         1.319   1.331   1.359   1.018   1.024   1.098   1.400   1.415   1.457
80    A         1.319   1.331   1.359   1.467   1.488   1.528   1.400   1.415   1.457
81    I        -0.135  -0.150  -0.088  -0.480  -0.535  -0.436  -0.377  -0.403  -0.314
82    Y         1.319   1.331   1.359   1.396   1.415   1.459   1.400   1.415   1.457
83    L         0.238   0.179   0.012   0.017  -0.073  -0.297   0.215   0.128  -0.146
84    R         1.319   1.331   1.359   1.479   1.495   1.539   1.400   1.415   1.457
85    D         1.319   1.331   1.359   1.329   1.346   1.396   1.400   1.415   1.457
86    V        -0.960  -0.912  -0.924  -0.916  -0.841  -0.864  -0.969  -0.913  -0.895
87    S        -0.960  -0.914  -0.924  -0.922  -0.856  -0.858  -0.969  -0.916  -0.895
88    Q        -1.054  -1.034  -0.942  -1.146  -1.108  -0.970  -1.068  -1.037  -0.915
89    N        -1.054  -1.034  -0.942  -1.255  -1.206  -1.074  -1.068  -1.037  -0.915
90    T        -1.054  -1.034  -0.942  -0.996  -0.989  -0.827  -1.068  -1.037  -0.915
91    N        -1.054  -1.034  -0.942  -1.206  -1.150  -1.028  -1.068  -1.037  -0.915
92    L        -1.054  -1.034  -0.942  -1.194  -1.165  -1.016  -1.068  -1.037  -0.915
93    L        -0.135  -0.150  -0.088  -0.541  -0.564  -0.435  -0.377  -0.403  -0.314
94    P         1.319   1.331   1.359   1.473   1.491   1.533   1.400   1.415   1.457
95    V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
96    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
97    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
98    Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
99    E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
100   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
101   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
102   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
103   F        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
104   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
105   S        -1.054  -1.034  -0.942  -1.059  -1.043  -0.887  -1.068  -1.037  -0.915
106   Q        -0.056  -0.109  -0.078   0.019  -0.086  -0.064  -0.245  -0.334  -0.297
107   N        -1.054  -1.034  -0.942  -1.212  -1.153  -1.033  -1.068  -1.037  -0.915
108   G        -0.056  -0.003  -0.070  -0.044   0.053  -0.088  -0.245  -0.159  -0.283
109   S        -1.054  -1.034  -0.942  -0.991  -0.965  -0.822  -1.068  -1.037  -0.915
110   N        -1.054  -1.034  -0.942  -1.111  -1.075  -0.937  -1.068  -1.037  -0.915
111   N        -0.056  -0.003  -0.070  -0.223  -0.124  -0.290  -0.245  -0.159  -0.283
112   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
113   Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
114   V        -0.056  -0.109  -0.078  -0.096  -0.187  -0.131  -0.245  -0.334  -0.297
115   N        -1.054  -1.034  -0.942  -1.440  -1.387  -1.251  -1.068  -1.037  -0.915
116   N        -1.054  -1.034  -0.942  -1.128  -1.078  -0.954  -1.068  -1.037  -0.915
117   G         1.319   1.331   1.359   1.382   1.406   1.447   1.400   1.415   1.457
118   S        -0.056  -0.109  -0.078   0.015  -0.066  -0.025  -0.245  -0.334  -0.297
119   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
120   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
121   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
122   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
123   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
124   N        -0.927  -0.758  -0.890  -0.781  -0.515  -0.747  -0.913  -0.698  -0.854
125   S        -0.734  -0.694  -0.850  -0.604  -0.554  -0.811  -0.673  -0.620  -0.805
126   S        -1.558  -1.562  -1.499  -1.249  -1.256  -1.182  -1.265  -1.261  -1.170
127   G        -0.135  -0.148  -0.090  -0.131  -0.149  -0.066  -0.377  -0.400  -0.318
128   N        -0.734  -0.802  -0.899  -0.728  -0.818  -0.922  -0.673  -0.753  -0.864
129   G        -2.157  -2.141  -2.012  -1.751  -1.712  -1.549  -1.561  -1.538  -1.389
130   N        -0.135  -0.080  -0.058  -0.265  -0.145  -0.147  -0.377  -0.285  -0.264
131   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
132   Y        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
133   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
134   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
135   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
136   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
137   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
138   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
139   T        -0.056   0.002  -0.037  -0.022   0.080  -0.013  -0.245  -0.151  -0.229
140   Y         0.238   0.226   0.022   0.450   0.440   0.156   0.215   0.198  -0.130
141   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
142   C        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
143   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
144   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
145   T        -1.054  -1.034  -0.942  -0.935  -0.923  -0.769  -1.068  -1.037  -0.915
146   L        -0.734  -0.802  -0.899  -0.816  -0.910  -0.966  -0.673  -0.753  -0.864
147   S        -0.960  -0.954  -0.927  -0.937  -0.928  -0.865  -0.969  -0.952  -0.898
148   G        -0.135  -0.150  -0.088  -0.382  -0.439  -0.350  -0.377  -0.403  -0.314
149   K        -1.558  -1.490  -1.528  -1.139  -1.029  -1.104  -1.265  -1.189  -1.197
150   D        -0.135  -0.150  -0.088  -0.391  -0.432  -0.339  -0.377  -0.403  -0.314
151   I        -0.135  -0.150  -0.088  -0.480  -0.535  -0.436  -0.377  -0.403  -0.314
152   Y        -0.135  -0.150  -0.088  -0.161  -0.190  -0.091  -0.377  -0.403  -0.314
153   N        -0.135  -0.150  -0.088  -0.268  -0.275  -0.156  -0.377  -0.403  -0.314
154   Y         1.319   1.331   1.359   1.396   1.415   1.459   1.400   1.415   1.457
155   G         1.319   1.331   1.359   1.420   1.442   1.482   1.400   1.415   1.457
156   L         1.319   1.331   1.359   1.018   1.024   1.098   1.400   1.415   1.457
157   I         0.238   0.217   0.015   0.227   0.194  -0.185   0.215   0.185  -0.141
158   I        -0.135  -0.150  -0.088  -0.480  -0.535  -0.436  -0.377  -0.403  -0.314
159   L         0.238   0.226   0.022   0.076   0.054  -0.176   0.215   0.198  -0.130
160   N         1.319   1.331   1.359   1.145   1.166   1.219   1.400   1.415   1.457
161   R         1.319   1.331   1.359   1.479   1.495   1.539   1.400   1.415   1.457
162   I        -0.960  -0.912  -0.924  -1.273  -1.198  -1.236  -0.969  -0.913  -0.895
163   N         1.319   1.331   1.359   1.145   1.166   1.219   1.400   1.415   1.457
164   P         1.319   1.331   1.359   1.473   1.491   1.533   1.400   1.415   1.457
165   D        -0.135  -0.150  -0.088  -0.299  -0.332  -0.234  -0.377  -0.403  -0.314
166   N        -0.135  -0.150  -0.088  -0.268  -0.275  -0.156  -0.377  -0.403  -0.314
167   F         1.319   1.331   1.359   1.449   1.462   1.511   1.400   1.415   1.457
168   S         1.319   1.331   1.359   1.378   1.392   1.442   1.400   1.415   1.457
169   M        -0.135  -0.080  -0.058  -0.406  -0.347  -0.270  -0.377  -0.285  -0.264
170   G         0.238   0.226   0.022   0.443   0.435   0.122   0.215   0.198  -0.130
171   I        -0.135  -0.150  -0.088  -0.480  -0.535  -0.436  -0.377  -0.403  -0.314
172   V        -0.960  -0.954  -0.927  -1.164  -1.173  -1.067  -0.969  -0.952  -0.898
173   P         1.319   1.331   1.359   1.473   1.491   1.533   1.400   1.415   1.457
174   N         1.319   1.331   1.359   1.145   1.166   1.219   1.400   1.415   1.457
175   S        -0.960  -0.912  -0.924  -1.033  -0.955  -0.996  -0.969  -0.913  -0.895
176   V        -0.135  -0.150  -0.088  -0.275  -0.303  -0.212  -0.377  -0.403  -0.314
177   V        -1.558  -1.605  -1.532  -1.546  -1.629  -1.545  -1.265  -1.302  -1.201
178   N         1.319   1.331   1.359   1.141   1.168   1.216   1.400   1.415   1.457
179   K         1.319   1.331   1.359   1.297   1.314   1.365   1.400   1.415   1.457
180   R        -0.734  -0.802  -0.899  -0.470  -0.576  -0.763  -0.673  -0.753  -0.864
181   K        -0.734  -0.802  -0.899  -0.479  -0.563  -0.680  -0.673  -0.753  -0.864
182   V        -0.960  -0.954  -0.927  -1.016  -1.003  -1.006  -0.969  -0.952  -0.898
183   F         1.319   1.331   1.359   1.449   1.462   1.511   1.400   1.415   1.457
184   N        -1.558  -1.490  -1.528  -1.349  -1.222  -1.341  -1.265  -1.189  -1.197
185   A        -2.157  -2.141  -2.012  -1.815  -1.801  -1.610  -1.561  -1.538  -1.389
186   E        -0.927  -0.907  -0.923  -0.897  -0.861  -0.915  -0.913  -0.883  -0.892
187   E        -0.178  -0.168  -0.092  -0.608  -0.597  -0.460  -0.451  -0.434  -0.321
188   D        -0.135  -0.139  -0.089  -0.391  -0.406  -0.341  -0.377  -0.385  -0.315
189   T        -2.157  -2.141  -2.012  -1.869  -1.858  -1.661  -1.561  -1.538  -1.389
190   L        -1.558  -1.566  -1.526  -1.474  -1.468  -1.429  -1.265  -1.265  -1.195
191   N        -0.734  -0.795  -0.857  -0.798  -0.883  -0.971  -0.673  -0.744  -0.814
192   P        -0.960  -0.954  -0.927  -0.931  -0.925  -0.884  -0.969  -0.952  -0.898
193   L         0.238   0.179   0.012   0.023  -0.068  -0.285   0.215   0.128  -0.146
194   E         1.319   1.331   1.359   1.305   1.325   1.373   1.400   1.415   1.457
195   C        -0.056  -0.109  -0.078   0.212   0.110   0.129  -0.245  -0.334  -0.297
196   M         1.319   1.331   1.359   1.572   1.591   1.628   1.400   1.415   1.457
197   G        -0.960  -0.954  -0.927  -0.943  -0.930  -0.889  -0.969  -0.952  -0.898
198   V         1.319   1.331   1.359   1.354   1.376   1.419   1.400   1.415   1.457
199   E         1.319   1.331   1.359   1.305   1.325   1.373   1.400   1.415   1.457
200   V        -0.135  -0.150  -0.088  -0.442  -0.496  -0.402  -0.377  -0.403  -0.314
201   K        -0.960  -0.954  -0.927  -1.079  -1.069  -0.987  -0.969  -0.952  -0.898
202   D         1.319   1.331   1.359   1.329   1.346   1.396   1.400   1.415   1.457
203   E        -0.960  -0.954  -0.927  -1.162  -1.153  -1.088  -0.969  -0.952  -0.898
204   L         1.319   1.331   1.359   1.018   1.024   1.098   1.400   1.415   1.457
205   V        -0.135  -0.150  -0.088  -0.275  -0.303  -0.212  -0.377  -0.403  -0.314
206   I         0.238   0.226   0.022   0.364   0.354   0.076   0.215   0.198  -0.130
207   I         0.238   0.217   0.015   0.308   0.285  -0.034   0.215   0.185  -0.141
208   K         0.238   0.179   0.012   0.369   0.295   0.044   0.215   0.128  -0.146
209   N        -0.734  -0.766  -0.858  -0.768  -0.810  -0.929  -0.673  -0.708  -0.814
210   L         1.319   1.331   1.359   1.018   1.024   1.098   1.400   1.415   1.457
211   K        -0.734  -0.802  -0.899  -0.706  -0.824  -1.035  -0.673  -0.753  -0.864
212   H        -0.960  -0.954  -0.927  -0.763  -0.754  -0.728  -0.969  -0.952  -0.898
213   E         0.238   0.217   0.015   0.296   0.271  -0.050   0.215   0.185  -0.141
214   V        -0.135  -0.150  -0.088  -0.275  -0.303  -0.212  -0.377  -0.403  -0.314
215   Y         1.319   1.331   1.359   1.396   1.415   1.459   1.400   1.415   1.457
216   G         1.319   1.331   1.359   1.420   1.442   1.482   1.400   1.415   1.457
217   I        -0.135  -0.150  -0.088  -0.480  -0.535  -0.436  -0.377  -0.403  -0.314
218   W         1.319   1.331   1.359   1.613   1.631   1.667   1.400   1.415   1.457
219   I        -0.135  -0.080  -0.058  -0.275  -0.168  -0.153  -0.377  -0.285  -0.264
220   H        -0.135  -0.150  -0.088   0.002  -0.034   0.050  -0.377  -0.403  -0.314
221   T        -0.135  -0.150  -0.088  -0.291  -0.339  -0.251  -0.377  -0.403  -0.314
222   V        -0.960  -0.954  -0.927  -0.960  -0.941  -0.881  -0.969  -0.952  -0.898
223   S        -0.960  -0.966  -0.904  -0.994  -0.999  -0.894  -0.969  -0.967  -0.872
224   D         1.319   1.331   1.359   1.329   1.346   1.396   1.400   1.415   1.457
225   R         1.319   1.331   1.359   1.479   1.495   1.539   1.400   1.415   1.457
226   Q        -1.558  -1.563  -1.526  -1.209  -1.213  -1.184  -1.265  -1.263  -1.195
227   N        -0.135  -0.150  -0.088  -0.438  -0.456  -0.348  -0.377  -0.403  -0.314
228   I        -0.960  -0.912  -0.924  -1.241  -1.193  -1.148  -0.969  -0.913  -0.895
229   Y         0.238   0.179   0.012   0.415   0.336   0.077   0.215   0.128  -0.146
230   E        -0.135  -0.150  -0.088  -0.299  -0.325  -0.228  -0.377  -0.403  -0.314
231   L         0.238   0.179   0.012   0.023  -0.068  -0.285   0.215   0.128  -0.146
232   I         0.238   0.217   0.015   0.227   0.194  -0.185   0.215   0.185  -0.141
233   K        -0.135  -0.150  -0.088  -0.289  -0.317  -0.225  -0.377  -0.403  -0.314
234   Y        -0.135  -0.150  -0.088  -0.161  -0.190  -0.091  -0.377  -0.403  -0.314
235   L        -0.135  -0.150  -0.088  -0.373  -0.386  -0.246  -0.377  -0.403  -0.314
236   L         1.319   1.331   1.359   1.018   1.024   1.098   1.400   1.415   1.457
237   E        -0.734  -0.802  -0.899  -0.673  -0.781  -0.954  -0.673  -0.753  -0.864
238   N         0.238   0.179   0.012   0.167   0.091  -0.142   0.215   0.128  -0.146
239   E         0.238   0.217   0.015   0.296   0.271  -0.050   0.215   0.185  -0.141
240   P         1.319   1.331   1.359   1.457   1.470   1.518   1.400   1.415   1.457
241   K        -0.056  -0.109  -0.078  -0.113  -0.204  -0.145  -0.245  -0.334  -0.297
242   D        -1.558  -1.563  -1.526  -1.327  -1.334  -1.267  -1.265  -1.263  -1.195
243   S         1.319   1.331   1.359   1.378   1.392   1.442   1.400   1.415   1.457
244   F        -0.734  -0.802  -0.899  -0.533  -0.655  -0.840  -0.673  -0.753  -0.864
245   A        -1.558  -1.605  -1.532  -1.393  -1.484  -1.402  -1.265  -1.302  -1.201
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q12517
Output conservation file - output/Q12517
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
