1     M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
2     I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
3     M         1.381   1.382   1.395   1.694   1.695   1.713   1.450   1.451   1.467
4     N         1.381   1.382   1.395   1.327   1.326   1.349   1.450   1.451   1.467
5     S        -0.173  -0.207  -0.224  -0.330  -0.393  -0.416  -0.271  -0.323  -0.348
6     T        -1.301  -1.298  -1.276  -1.325  -1.317  -1.283  -1.131  -1.127  -1.090
7     N         1.381   1.382   1.395   1.327   1.326   1.349   1.450   1.451   1.467
8     T         1.381   1.382   1.395   1.424   1.429   1.445   1.450   1.451   1.467
9     V        -1.301  -1.298  -1.276  -1.137  -1.144  -1.097  -1.131  -1.127  -1.090
10    V         1.381   1.382   1.395   1.529   1.531   1.550   1.450   1.451   1.467
11    Y         1.381   1.382   1.395   1.673   1.677   1.693   1.450   1.451   1.467
12    I        -0.173  -0.148  -0.223   0.038   0.075  -0.042  -0.271  -0.233  -0.347
13    K        -0.173  -0.207  -0.224  -0.239  -0.285  -0.305  -0.271  -0.323  -0.348
14    V         1.381   1.382   1.395   1.529   1.531   1.550   1.450   1.451   1.467
15    K        -0.173  -0.207  -0.224  -0.199  -0.242  -0.258  -0.271  -0.323  -0.348
16    G         1.381   1.382   1.395   1.643   1.646   1.663   1.450   1.451   1.467
17    R        -0.173  -0.148  -0.223  -0.239  -0.202  -0.304  -0.271  -0.233  -0.347
18    R         1.381   1.382   1.395   1.539   1.541   1.560   1.450   1.451   1.467
19    P         1.381   1.382   1.395   1.591   1.595   1.612   1.450   1.451   1.467
20    Q        -1.301  -1.298  -1.276  -1.263  -1.264  -1.222  -1.131  -1.127  -1.090
21    G        -0.173  -0.207  -0.224   0.043  -0.021  -0.062  -0.271  -0.323  -0.348
22    F         1.381   1.382   1.395   1.602   1.605   1.622   1.450   1.451   1.467
23    L        -0.173  -0.148  -0.223  -0.159  -0.112  -0.274  -0.271  -0.233  -0.347
24    D        -0.173  -0.207  -0.224  -0.254  -0.314  -0.352  -0.271  -0.323  -0.348
25    P        -0.173  -0.207  -0.224   0.038  -0.018  -0.056  -0.271  -0.323  -0.348
26    P        -0.173  -0.207  -0.224  -0.047  -0.110  -0.158  -0.271  -0.323  -0.348
27    K        -1.301  -1.298  -1.276  -1.111  -1.095  -1.071  -1.131  -1.127  -1.090
28    F         1.381   1.382   1.395   1.602   1.605   1.622   1.450   1.451   1.467
29    E        -0.173  -0.207  -0.224  -0.214  -0.257  -0.281  -0.271  -0.323  -0.348
30    W         1.381   1.382   1.395   1.704   1.706   1.724   1.450   1.451   1.467
31    N        -0.173  -0.207  -0.224  -0.234  -0.295  -0.321  -0.271  -0.323  -0.348
32    G        -1.301  -1.298  -1.276  -1.060  -1.072  -1.020  -1.131  -1.127  -1.090
33    T        -1.301  -1.298  -1.276  -1.047  -1.038  -1.008  -1.131  -1.127  -1.090
34    K        -0.173  -0.207  -0.224  -0.239  -0.285  -0.305  -0.271  -0.323  -0.348
35    E        -0.173  -0.207  -0.224  -0.305  -0.356  -0.388  -0.271  -0.323  -0.348
36    R        -0.173  -0.148  -0.223  -0.239  -0.202  -0.304  -0.271  -0.233  -0.347
37    Q        -1.301  -1.298  -1.276  -1.157  -1.144  -1.116  -1.131  -1.127  -1.090
38    L         1.381   1.382   1.395   1.106   1.109   1.130   1.450   1.451   1.467
39    W         1.381   1.382   1.395   1.704   1.706   1.724   1.450   1.451   1.467
40    T        -0.173  -0.157  -0.227  -0.199  -0.170  -0.305  -0.271  -0.247  -0.352
41    M        -1.301  -1.298  -1.276  -1.304  -1.308  -1.263  -1.131  -1.127  -1.090
42    V        -1.301  -1.298  -1.276  -1.209  -1.198  -1.169  -1.131  -1.127  -1.090
43    S         1.381   1.382   1.395   1.240   1.238   1.263   1.450   1.451   1.467
44    N        -1.301  -1.298  -1.276  -1.297  -1.300  -1.256  -1.131  -1.127  -1.090
45    L        -0.173  -0.207  -0.224  -0.346  -0.391  -0.405  -0.271  -0.323  -0.348
46    N        -0.173  -0.207  -0.224  -0.234  -0.295  -0.321  -0.271  -0.323  -0.348
47    Y        -0.311  -0.310  -0.290  -0.222  -0.221  -0.189  -0.486  -0.485  -0.451
48    S        -0.173  -0.157  -0.227  -0.204  -0.185  -0.270  -0.271  -0.247  -0.352
49    Q        -1.301  -1.298  -1.276  -1.353  -1.363  -1.311  -1.131  -1.127  -1.090
50    D        -1.301  -1.298  -1.276  -1.438  -1.431  -1.396  -1.131  -1.127  -1.090
51    Q        -1.301  -1.298  -1.276  -1.263  -1.258  -1.222  -1.131  -1.127  -1.090
52    I        -0.173  -0.207  -0.224   0.122   0.073   0.051  -0.271  -0.323  -0.348
53    D         1.381   1.382   1.395   1.359   1.360   1.382   1.450   1.451   1.467
54    W         1.381   1.382   1.395   1.704   1.706   1.724   1.450   1.451   1.467
55    Q        -0.173  -0.157  -0.227   0.043   0.066  -0.035  -0.271  -0.247  -0.352
56    N        -1.301  -1.298  -1.276  -1.541  -1.534  -1.498  -1.131  -1.127  -1.090
57    L         1.381   1.382   1.395   1.106   1.109   1.130   1.450   1.451   1.467
58    S        -1.301  -1.298  -1.276  -1.016  -1.005  -0.977  -1.131  -1.127  -1.090
59    K        -1.301  -1.298  -1.276  -1.263  -1.239  -1.222  -1.131  -1.127  -1.090
60    I        -1.301  -1.298  -1.276  -0.991  -0.996  -0.952  -1.131  -1.127  -1.090
61    F        -0.173  -0.148  -0.223  -0.320  -0.287  -0.373  -0.271  -0.233  -0.347
62    E        -1.301  -1.298  -1.276  -1.170  -1.148  -1.129  -1.131  -1.127  -1.090
63    T        -0.173  -0.148  -0.223   0.066   0.107  -0.028  -0.271  -0.233  -0.347
64    P         1.381   1.382   1.395   1.591   1.595   1.612   1.450   1.451   1.467
65    E        -0.173  -0.157  -0.227  -0.214  -0.186  -0.284  -0.271  -0.247  -0.352
66    F        -1.301  -1.298  -1.276  -0.810  -0.804  -0.772  -1.131  -1.127  -1.090
67    F         1.381   1.382   1.395   1.602   1.605   1.622   1.450   1.451   1.467
68    L         1.381   1.382   1.395   1.106   1.109   1.130   1.450   1.451   1.467
69    K         1.381   1.382   1.395   1.229   1.234   1.252   1.450   1.451   1.467
70    K        -0.173  -0.157  -0.227  -0.239  -0.214  -0.309  -0.271  -0.247  -0.352
71    R         1.381   1.382   1.395   1.539   1.541   1.560   1.450   1.451   1.467
72    T        -1.301  -1.298  -1.276  -1.054  -1.063  -1.014  -1.131  -1.127  -1.090
73    Y         1.381   1.382   1.395   1.673   1.677   1.693   1.450   1.451   1.467
74    K        -1.301  -1.298  -1.276  -1.395  -1.375  -1.353  -1.131  -1.127  -1.090
75    L         1.381   1.382   1.395   1.106   1.109   1.130   1.450   1.451   1.467
76    F         1.381   1.382   1.395   1.602   1.605   1.622   1.450   1.451   1.467
77    A        -1.301  -1.298  -1.276  -0.997  -0.994  -0.958  -1.131  -1.127  -1.090
78    E        -1.301  -1.298  -1.276  -1.460  -1.448  -1.417  -1.131  -1.127  -1.090
79    H        -0.173  -0.207  -0.224   0.191   0.134   0.095  -0.271  -0.323  -0.348
80    L        -0.173  -0.157  -0.227  -0.320  -0.299  -0.377  -0.271  -0.247  -0.352
81    E        -0.173  -0.207  -0.224  -0.367  -0.421  -0.461  -0.271  -0.323  -0.348
82    L        -0.173  -0.207  -0.224  -0.356  -0.403  -0.417  -0.271  -0.323  -0.348
83    L         1.381   1.382   1.395   1.106   1.109   1.130   1.450   1.451   1.467
84    Q        -1.301  -1.298  -1.276  -1.157  -1.167  -1.116  -1.131  -1.127  -1.090
85    L        -1.301  -1.298  -1.276  -1.374  -1.368  -1.332  -1.131  -1.127  -1.090
86    Q         1.381   1.382   1.395   1.498   1.501   1.519   1.450   1.451   1.467
87    L        -0.173  -0.148  -0.223  -0.139  -0.092  -0.255  -0.271  -0.233  -0.347
88    E        -0.173  -0.148  -0.223  -0.254  -0.210  -0.349  -0.271  -0.233  -0.347
89    K        -0.311  -0.310  -0.290  -0.424  -0.424  -0.389  -0.486  -0.485  -0.451
90    K         1.381   1.382   1.395   1.188   1.189   1.211   1.450   1.451   1.467
91    R        -0.311  -0.310  -0.290  -0.292  -0.291  -0.258  -0.486  -0.485  -0.451
92    D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
93    L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
94    E        -0.311  -0.310  -0.290  -0.703  -0.705  -0.666  -0.486  -0.485  -0.451
95    K        -0.311  -0.310  -0.290  -0.561  -0.562  -0.525  -0.486  -0.485  -0.451
96    Y        -0.311  -0.310  -0.290  -0.031  -0.028   0.002  -0.486  -0.485  -0.451
97    S        -0.311  -0.310  -0.290  -0.648  -0.649  -0.611  -0.486  -0.485  -0.451
98    N        -0.311  -0.310  -0.290  -0.414  -0.414  -0.379  -0.486  -0.485  -0.451
99    D         1.381   1.382   1.395   1.373   1.375   1.395   1.450   1.451   1.467
100   Q        -0.311  -0.310  -0.290  -0.193  -0.192  -0.160  -0.486  -0.485  -0.451
101   V        -0.311  -0.310  -0.290  -0.332  -0.331  -0.298  -0.486  -0.485  -0.451
102   N        -0.311  -0.310  -0.290  -0.561  -0.562  -0.525  -0.486  -0.485  -0.451
103   E        -0.311  -0.310  -0.290  -0.550  -0.551  -0.514  -0.486  -0.485  -0.451
104   G        -0.311  -0.310  -0.290  -0.125  -0.124  -0.092  -0.486  -0.485  -0.451
105   M        -0.311  -0.310  -0.290  -0.322  -0.311  -0.288  -0.486  -0.485  -0.451
106   S        -0.311  -0.310  -0.290  -0.322  -0.321  -0.288  -0.486  -0.485  -0.451
107   D         1.381   1.382   1.395   1.373   1.375   1.395   1.450   1.451   1.467
108   L        -0.311  -0.310  -0.290  -0.648  -0.649  -0.611  -0.486  -0.485  -0.451
109   I        -0.311  -0.310  -0.290  -0.282  -0.271  -0.248  -0.486  -0.485  -0.451
110   H        -0.311  -0.310  -0.290  -0.302  -0.301  -0.268  -0.486  -0.485  -0.451
111   K        -0.311  -0.310  -0.290  -0.703  -0.705  -0.666  -0.486  -0.485  -0.451
112   Y        -0.311  -0.310  -0.290  -0.097  -0.085  -0.064  -0.486  -0.485  -0.451
113   T         1.381   1.382   1.395   1.387   1.389   1.409   1.450   1.451   1.467
114   P        -0.311  -0.310  -0.290  -0.414  -0.414  -0.379  -0.486  -0.485  -0.451
115   T        -0.311  -0.310  -0.290  -0.550  -0.551  -0.514  -0.486  -0.485  -0.451
116   L        -0.311  -0.310  -0.290  -0.486  -0.487  -0.451  -0.486  -0.485  -0.451
117   Q        -0.311  -0.310  -0.290  -0.322  -0.321  -0.288  -0.486  -0.485  -0.451
118   N        -0.311  -0.310  -0.290  -0.262  -0.261  -0.228  -0.486  -0.485  -0.451
119   D        -0.311  -0.310  -0.290  -0.615  -0.616  -0.579  -0.486  -0.485  -0.451
120   N         1.381   1.382   1.395   1.373   1.375   1.395   1.450   1.451   1.467
121   L        -0.311  -0.310  -0.290  -0.508  -0.508  -0.472  -0.486  -0.485  -0.451
122   L         1.381   1.382   1.395   1.115   1.115   1.139   1.450   1.451   1.467
123   N        -0.311  -0.310  -0.290  -0.282  -0.281  -0.248  -0.486  -0.485  -0.451
124   V         1.381   1.382   1.395   1.539   1.542   1.560   1.450   1.451   1.467
125   S        -0.311  -0.310  -0.290  -0.322  -0.321  -0.288  -0.486  -0.485  -0.451
126   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
127   S        -0.311  -0.310  -0.290  -0.445  -0.445  -0.410  -0.486  -0.485  -0.451
128   P         1.381   1.382   1.395   1.566   1.569   1.587   1.450   1.451   1.467
129   L        -1.301  -1.298  -1.276  -1.150  -1.137  -1.110  -1.131  -1.127  -1.090
130   T         1.381   1.382   1.395   1.424   1.429   1.445   1.450   1.451   1.467
131   T        -1.301  -1.298  -1.276  -1.196  -1.202  -1.156  -1.131  -1.127  -1.090
132   E        -1.301  -1.298  -1.276  -1.284  -1.279  -1.242  -1.131  -1.127  -1.090
133   R        -1.301  -1.298  -1.276  -1.196  -1.187  -1.156  -1.131  -1.127  -1.090
134   Q        -1.301  -1.298  -1.276  -1.150  -1.137  -1.110  -1.131  -1.127  -1.090
135   D        -1.301  -1.298  -1.276  -1.203  -1.210  -1.162  -1.131  -1.127  -1.090
136   S        -0.173  -0.157  -0.227  -0.330  -0.311  -0.420  -0.271  -0.247  -0.352
137   E        -0.173  -0.207  -0.224  -0.361  -0.419  -0.455  -0.271  -0.323  -0.348
138   E        -0.173  -0.157  -0.227  -0.305  -0.275  -0.392  -0.271  -0.247  -0.352
139   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
140   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
141   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
142   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
143   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
144   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
145   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
146   V        -1.301  -1.298  -1.276  -1.332  -1.336  -1.290  -1.131  -1.127  -1.090
147   E        -1.301  -1.298  -1.276  -1.196  -1.178  -1.156  -1.131  -1.127  -1.090
148   T        -1.301  -1.298  -1.276  -1.118  -1.119  -1.078  -1.131  -1.127  -1.090
149   E        -1.301  -1.298  -1.276  -1.431  -1.429  -1.389  -1.131  -1.127  -1.090
150   V        -0.173  -0.157  -0.227  -0.018   0.008  -0.114  -0.271  -0.247  -0.352
151   T        -0.173  -0.207  -0.224  -0.144  -0.201  -0.236  -0.271  -0.323  -0.348
152   N        -0.173  -0.157  -0.227  -0.294  -0.269  -0.397  -0.271  -0.247  -0.352
153   E        -1.301  -1.298  -1.276  -1.460  -1.448  -1.417  -1.131  -1.127  -1.090
154   A        -0.173  -0.207  -0.224   0.122   0.065   0.036  -0.271  -0.323  -0.348
155   L        -0.173  -0.157  -0.227  -0.346  -0.325  -0.408  -0.271  -0.247  -0.352
156   Q        -0.173  -0.157  -0.227  -0.125  -0.093  -0.234  -0.271  -0.247  -0.352
157   H        -1.301  -1.298  -1.276  -0.991  -1.000  -0.952  -1.131  -1.127  -1.090
158   L         1.381   1.382   1.395   1.106   1.109   1.130   1.450   1.451   1.467
159   Q        -0.173  -0.157  -0.227  -0.134  -0.104  -0.245  -0.271  -0.247  -0.352
160   T        -1.301  -1.298  -1.276  -1.150  -1.137  -1.110  -1.131  -1.127  -1.090
161   S         1.381   1.382   1.395   1.240   1.238   1.263   1.450   1.451   1.467
162   K        -0.173  -0.148  -0.223  -0.095  -0.050  -0.201  -0.271  -0.233  -0.347
163   I         1.381   1.382   1.395   1.550   1.552   1.571   1.450   1.451   1.467
164   L        -0.173  -0.207  -0.224  -0.274  -0.314  -0.321  -0.271  -0.323  -0.348
165   N         1.381   1.382   1.395   1.327   1.326   1.349   1.450   1.451   1.467
166   I        -1.301  -1.298  -1.276  -0.804  -0.793  -0.766  -1.131  -1.127  -1.090
167   H        -0.173  -0.148  -0.223  -0.149  -0.115  -0.199  -0.271  -0.233  -0.347
168   K        -1.301  -1.298  -1.276  -1.339  -1.344  -1.297  -1.131  -1.127  -1.090
169   K        -1.301  -1.298  -1.276  -1.388  -1.381  -1.346  -1.131  -1.127  -1.090
170   T        -0.173  -0.148  -0.223  -0.294  -0.253  -0.369  -0.271  -0.233  -0.347
171   S        -1.301  -1.298  -1.276  -1.481  -1.467  -1.439  -1.131  -1.127  -1.090
172   D         1.381   1.382   1.395   1.359   1.360   1.382   1.450   1.451   1.467
173   S        -0.311  -0.310  -0.290  -0.252  -0.251  -0.218  -0.486  -0.485  -0.451
174   E        -0.311  -0.310  -0.290  -0.561  -0.562  -0.525  -0.486  -0.485  -0.451
175   N         1.381   1.382   1.395   1.373   1.375   1.395   1.450   1.451   1.467
176   K        -0.311  -0.310  -0.290  -0.424  -0.424  -0.389  -0.486  -0.485  -0.451
177   P        -0.311  -0.310  -0.290  -0.414  -0.414  -0.379  -0.486  -0.485  -0.451
178   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
179   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
180   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
181   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
182   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
183   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
184   N        -0.311  -0.310  -0.290  -0.424  -0.424  -0.389  -0.486  -0.485  -0.451
185   D        -0.311  -0.310  -0.290  -0.455  -0.455  -0.420  -0.486  -0.485  -0.451
186   K        -0.311  -0.310  -0.290  -0.550  -0.551  -0.514  -0.486  -0.485  -0.451
187   L        -0.311  -0.310  -0.290  -0.403  -0.403  -0.368  -0.486  -0.485  -0.451
188   D        -0.311  -0.310  -0.290  -0.561  -0.562  -0.525  -0.486  -0.485  -0.451
189   K         1.381   1.382   1.395   1.188   1.189   1.211   1.450   1.451   1.467
190   D        -1.301  -1.298  -1.276  -1.374  -1.369  -1.332  -1.131  -1.127  -1.090
191   G        -0.173  -0.207  -0.224  -0.052  -0.122  -0.175  -0.271  -0.323  -0.348
192   I        -1.301  -1.298  -1.276  -0.905  -0.900  -0.867  -1.131  -1.127  -1.090
193   N        -0.173  -0.157  -0.227  -0.062  -0.044  -0.121  -0.271  -0.247  -0.352
194   K        -1.301  -1.298  -1.276  -1.346  -1.339  -1.304  -1.131  -1.127  -1.090
195   E        -0.173  -0.207  -0.224  -0.239  -0.284  -0.310  -0.271  -0.323  -0.348
196   M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
197   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
198   C        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
199   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
200   S        -0.173  -0.148  -0.223  -0.361  -0.316  -0.453  -0.271  -0.233  -0.347
201   S        -0.173  -0.157  -0.227  -0.284  -0.263  -0.365  -0.271  -0.247  -0.352
202   D        -1.301  -1.298  -1.276  -1.431  -1.430  -1.389  -1.131  -1.127  -1.090
203   D        -0.173  -0.148  -0.223  -0.315  -0.281  -0.396  -0.271  -0.233  -0.347
204   D        -0.173  -0.148  -0.223  -0.305  -0.261  -0.386  -0.271  -0.233  -0.347
205   L         1.381   1.382   1.395   1.106   1.109   1.130   1.450   1.451   1.467
206   S         1.381   1.382   1.395   1.331   1.333   1.354   1.450   1.451   1.467
207   S         1.381   1.382   1.395   1.240   1.238   1.263   1.450   1.451   1.467
208   S        -0.173  -0.207  -0.224  -0.330  -0.393  -0.416  -0.271  -0.323  -0.348
209   L         1.381   1.382   1.395   1.106   1.109   1.130   1.450   1.451   1.467
210   S        -0.173  -0.157  -0.227  -0.179  -0.161  -0.240  -0.271  -0.247  -0.352
211   V         1.381   1.382   1.395   1.529   1.531   1.550   1.450   1.451   1.467
212   S         1.381   1.382   1.395   1.240   1.238   1.263   1.450   1.451   1.467
213   K         1.381   1.382   1.395   1.229   1.234   1.252   1.450   1.451   1.467
214   S         1.381   1.382   1.395   1.240   1.238   1.263   1.450   1.451   1.467
215   A        -0.173  -0.157  -0.227   0.066   0.092  -0.034  -0.271  -0.247  -0.352
216   L         1.381   1.382   1.395   1.106   1.109   1.130   1.450   1.451   1.467
217   E         1.381   1.382   1.395   1.251   1.259   1.274   1.450   1.451   1.467
218   E        -0.173  -0.207  -0.224  -0.305  -0.356  -0.388  -0.271  -0.323  -0.348
219   A         1.381   1.382   1.395   1.622   1.622   1.642   1.450   1.451   1.467
220   L         1.381   1.382   1.395   1.106   1.109   1.130   1.450   1.451   1.467
221   M         1.381   1.382   1.395   1.694   1.695   1.713   1.450   1.451   1.467
222   D         1.381   1.382   1.395   1.359   1.360   1.382   1.450   1.451   1.467
223   R        -1.301  -1.298  -1.276  -0.991  -0.972  -0.952  -1.131  -1.127  -1.090
224   L         1.381   1.382   1.395   1.106   1.109   1.130   1.450   1.451   1.467
225   Q         1.381   1.382   1.395   1.498   1.501   1.519   1.450   1.451   1.467
226   F        -1.301  -1.298  -1.276  -1.163  -1.177  -1.123  -1.131  -1.127  -1.090
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q12092
Output conservation file - output/Q12092
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
