1     M         1.616   1.658   1.746   1.824   1.886   2.020   1.777   1.838   1.990
2     K        -1.390  -1.371  -1.290  -1.383  -1.374  -1.260  -1.146  -1.115  -1.000
3     G        -1.731  -1.694  -1.578  -1.518  -1.463  -1.297  -1.292  -1.246  -1.105
4     -        -1.068  -1.085  -0.981  -0.958  -0.979  -0.837  -1.008  -1.011  -0.879
5     -        -1.068  -1.037  -0.967  -0.842  -0.783  -0.687  -1.008  -0.965  -0.865
6     T        -0.921  -0.826  -0.914  -0.832  -0.695  -0.833  -0.853  -0.739  -0.812
7     G         0.911   0.930   0.779   1.045   1.067   0.844   0.900   0.926   0.622
8     G         0.521   0.512   0.582   0.388   0.363   0.464   0.186   0.149   0.226
9     V        -0.198  -0.201  -0.102  -0.392  -0.385  -0.237  -0.514  -0.510  -0.380
10    V        -1.152  -1.124  -1.003  -1.173  -1.119  -0.955  -1.087  -1.045  -0.899
11    V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
12    G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
13    T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
14    Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
15    N        -0.521  -0.500  -0.529  -0.574  -0.553  -0.611  -0.610  -0.584  -0.609
16    P        -0.521  -0.543  -0.540  -0.465  -0.515  -0.483  -0.610  -0.636  -0.623
17    V        -1.390  -1.334  -1.285  -1.330  -1.249  -1.181  -1.146  -1.084  -0.996
18    R        -0.368  -0.326  -0.473  -0.234  -0.179  -0.444  -0.415  -0.355  -0.540
19    D         0.911   0.808   0.759   0.966   0.816   0.714   0.900   0.715   0.584
20    Y         0.911   0.808   0.759   1.111   0.990   0.916   0.900   0.715   0.584
21    N         1.616   1.658   1.746   1.567   1.634   1.766   1.777   1.838   1.990
22    H         1.616   1.658   1.746   1.712   1.773   1.909   1.777   1.838   1.990
23    S        -0.028  -0.117  -0.055  -0.194  -0.322  -0.222  -0.269  -0.388  -0.314
24    T         0.911   0.916   0.773   1.151   1.170   0.954   0.900   0.903   0.612
25    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
26    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
27    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
28    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
29    D         0.911   0.808   0.759   0.983   0.840   0.750   0.900   0.715   0.584
30    E        -1.364  -1.275  -1.263  -1.294  -1.176  -1.143  -1.132  -1.043  -0.981
31    E         0.968   1.083   0.833   0.960   1.098   0.753   0.994   1.172   0.725
32    Y         1.616   1.658   1.746   1.709   1.772   1.907   1.777   1.838   1.990
33    Q        -0.543  -0.638  -0.539  -0.804  -0.920  -0.771  -0.685  -0.762  -0.631
34    R         0.068   0.097   0.009   0.051   0.055  -0.093  -0.125  -0.114  -0.221
35    L         0.968   0.846   0.811   1.007   0.873   0.830   0.994   0.783   0.685
36    R         1.616   1.658   1.746   1.678   1.730   1.876   1.777   1.838   1.990
37    R        -0.768  -0.598  -0.823  -0.702  -0.470  -0.778  -0.685  -0.479  -0.717
38    L        -0.954  -0.875  -0.911  -0.993  -0.885  -0.921  -0.908  -0.817  -0.815
39    A         1.616   1.658   1.746   1.474   1.528   1.673   1.777   1.838   1.990
40    D        -0.230  -0.373  -0.453   0.003  -0.194  -0.316  -0.237  -0.419  -0.515
41    E        -1.364  -1.304  -1.269  -1.453  -1.373  -1.319  -1.132  -1.065  -0.985
42    A        -0.245  -0.166  -0.106  -0.617  -0.503  -0.406  -0.573  -0.463  -0.384
43    Y        -0.768  -0.845  -0.887  -0.471  -0.633  -0.668  -0.685  -0.767  -0.785
44    K        -0.954  -0.903  -0.925  -1.028  -0.968  -0.990  -0.908  -0.858  -0.830
45    K        -0.230  -0.126  -0.402  -0.128   0.023  -0.380  -0.237  -0.095  -0.451
46    R         0.351   0.381   0.128   0.573   0.613   0.268   0.322   0.362  -0.025
47    D        -0.954  -0.972  -0.932  -1.136  -1.148  -1.085  -0.908  -0.918  -0.836
48    Q        -0.954  -1.026  -0.940  -1.092  -1.160  -1.034  -0.908  -0.960  -0.843
49    L         0.968   0.925   0.807   0.990   0.952   0.788   0.994   0.917   0.677
50    S         0.649   0.561   0.616   0.673   0.537   0.613   0.434   0.246   0.297
51    H        -0.230  -0.263  -0.438  -0.272  -0.304  -0.572  -0.237  -0.273  -0.496
52    E        -0.060   0.039  -0.002  -0.378  -0.195  -0.257  -0.349  -0.190  -0.240
53    S         0.649   0.561   0.616   0.560   0.378   0.430   0.434   0.246   0.297
54    Q         0.968   0.925   0.807   0.852   0.818   0.656   0.994   0.917   0.677
55    T        -1.364  -1.355  -1.279  -1.374  -1.338  -1.219  -1.132  -1.105  -0.993
56    A         0.968   1.077   0.830   0.909   1.044   0.732   0.994   1.162   0.719
57    Y         0.968   1.077   0.830   1.171   1.309   1.014   0.994   1.162   0.719
58    Q        -0.470  -0.574  -0.518  -0.619  -0.750  -0.711  -0.573  -0.674  -0.604
59    Q        -0.954  -0.994  -0.927  -0.973  -1.041  -0.926  -0.908  -0.930  -0.831
60    G         1.616   1.658   1.746   1.595   1.654   1.793   1.777   1.838   1.990
61    D         0.968   0.846   0.811   1.069   0.918   0.847   0.994   0.783   0.685
62    K         0.478   0.517   0.586   0.203   0.267   0.352   0.099   0.158   0.233
63    K        -0.768  -0.555  -0.833  -0.811  -0.490  -0.945  -0.685  -0.429  -0.727
64    L        -0.230  -0.240  -0.428  -0.163  -0.173  -0.480  -0.237  -0.244  -0.484
65    A         1.616   1.658   1.746   1.474   1.528   1.673   1.777   1.838   1.990
66    H         0.649   0.650   0.642   0.657   0.651   0.589   0.434   0.420   0.350
67    E        -0.470  -0.438  -0.497  -0.600  -0.567  -0.656  -0.573  -0.527  -0.579
68    L         1.616   1.658   1.746   1.544   1.613   1.743   1.777   1.838   1.990
69    S         1.616   1.658   1.746   1.634   1.701   1.832   1.777   1.838   1.990
70    E         0.351   0.169   0.089   0.386   0.099  -0.038   0.322   0.054  -0.084
71    K        -0.768  -0.684  -0.847  -0.766  -0.648  -0.952  -0.685  -0.582  -0.743
72    S        -0.245  -0.247  -0.127  -0.538  -0.551  -0.364  -0.573  -0.571  -0.413
73    K         1.616   1.658   1.746   1.542   1.612   1.740   1.777   1.838   1.990
74    A        -0.230  -0.249  -0.419  -0.163  -0.202  -0.463  -0.237  -0.267  -0.472
75    Q        -1.364  -1.323  -1.275  -1.219  -1.129  -1.078  -1.132  -1.084  -0.990
76    L        -0.470  -0.544  -0.529  -0.570  -0.693  -0.688  -0.573  -0.659  -0.619
77    K        -0.656  -0.594  -0.565  -0.915  -0.851  -0.768  -0.796  -0.728  -0.660
78    T        -1.364  -1.355  -1.279  -1.429  -1.375  -1.269  -1.132  -1.105  -0.993
79    A         0.068  -0.028  -0.019   0.018  -0.116  -0.071  -0.125  -0.268  -0.263
80    E         0.478   0.494   0.573   0.244   0.249   0.373   0.099   0.112   0.207
81    D        -1.364  -1.327  -1.269  -1.366  -1.313  -1.238  -1.132  -1.083  -0.986
82    F        -0.768  -0.732  -0.867  -0.404  -0.364  -0.538  -0.685  -0.636  -0.764
83    N         1.616   1.658   1.746   1.563   1.628   1.761   1.777   1.838   1.990
84    M        -0.470  -0.470  -0.511  -0.389  -0.383  -0.447  -0.573  -0.554  -0.595
85    Q         0.968   1.095   0.833   0.827   1.003   0.643   0.994   1.189   0.726
86    A         1.616   1.658   1.746   1.474   1.528   1.673   1.777   1.838   1.990
87    A         1.616   1.658   1.746   1.474   1.528   1.673   1.777   1.838   1.990
88    E         0.968   0.846   0.811   0.993   0.820   0.784   0.994   0.783   0.685
89    Y         0.351   0.169   0.089   0.593   0.337   0.214   0.322   0.054  -0.084
90    V         0.649   0.561   0.616   0.647   0.488   0.555   0.434   0.246   0.297
91    F         0.968   0.846   0.811   1.268   1.115   1.061   0.994   0.783   0.685
92    V        -0.060  -0.128  -0.040  -0.120  -0.215  -0.086  -0.349  -0.415  -0.300
93    E        -0.230  -0.276  -0.427  -0.168  -0.248  -0.498  -0.237  -0.299  -0.482
94    N         0.968   0.846   0.811   0.985   0.828   0.761   0.994   0.783   0.685
95    N         1.616   1.658   1.746   1.563   1.628   1.761   1.777   1.838   1.990
96    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
97    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
98    A        -0.470  -0.535  -0.515  -0.557  -0.663  -0.594  -0.573  -0.639  -0.600
99    D         0.351   0.169   0.089   0.493   0.236   0.084   0.322   0.054  -0.084
100   S         0.351   0.169   0.089   0.547   0.323   0.203   0.322   0.054  -0.084
101   S        -0.543  -0.549  -0.527  -0.694  -0.714  -0.655  -0.685  -0.682  -0.620
102   S        -0.954  -0.934  -0.924  -0.828  -0.811  -0.786  -0.908  -0.881  -0.829
103   N         0.478   0.532   0.584   0.278   0.378   0.415   0.099   0.189   0.230
104   E         0.968   0.925   0.807   1.015   0.954   0.824   0.994   0.917   0.677
105   I         1.616   1.658   1.746   1.676   1.730   1.873   1.777   1.838   1.990
106   D         1.616   1.658   1.746   1.645   1.716   1.842   1.777   1.838   1.990
107   L         1.616   1.658   1.746   1.544   1.613   1.743   1.777   1.838   1.990
108   H         1.616   1.658   1.746   1.712   1.774   1.909   1.777   1.838   1.990
109   G         1.616   1.658   1.746   1.595   1.654   1.793   1.777   1.838   1.990
110   L         1.616   1.658   1.746   1.544   1.613   1.743   1.777   1.838   1.990
111   Y         1.616   1.658   1.746   1.709   1.772   1.907   1.777   1.838   1.990
112   V         0.968   0.846   0.811   1.098   0.948   0.893   0.994   0.783   0.685
113   K         0.068  -0.054  -0.016  -0.030  -0.207  -0.171  -0.125  -0.292  -0.257
114   E         1.616   1.658   1.746   1.558   1.600   1.756   1.777   1.838   1.990
115   A         1.616   1.658   1.746   1.474   1.528   1.673   1.777   1.838   1.990
116   L        -0.768  -0.797  -0.880  -0.616  -0.672  -0.782  -0.685  -0.713  -0.778
117   F        -0.954  -1.022  -0.935  -0.637  -0.772  -0.652  -0.908  -0.955  -0.838
118   I         0.068   0.016   0.020   0.167   0.080   0.085  -0.125  -0.178  -0.200
119   L         0.968   0.846   0.811   0.983   0.837   0.779   0.994   0.783   0.685
120   Q        -0.470  -0.432  -0.497  -0.690  -0.633  -0.729  -0.573  -0.517  -0.579
121   K        -1.066  -1.029  -0.964  -1.274  -1.250  -1.136  -1.020  -0.970  -0.867
122   R         1.616   1.658   1.746   1.678   1.730   1.876   1.777   1.838   1.990
123   I         0.351   0.445   0.133   0.589   0.709   0.308   0.322   0.460  -0.017
124   K        -1.252  -1.284  -1.248  -1.265  -1.346  -1.277  -1.020  -1.041  -0.965
125   F        -0.954  -1.000  -0.938  -0.878  -0.950  -0.821  -0.908  -0.942  -0.841
126   A         0.649   0.628   0.638   0.519   0.480   0.505   0.434   0.380   0.341
127   I        -0.954  -0.925  -0.913  -0.863  -0.823  -0.813  -0.908  -0.853  -0.816
128   D        -0.954  -1.034  -0.947  -1.026  -1.134  -1.035  -0.908  -0.969  -0.850
129   H        -0.954  -0.835  -0.915  -0.765  -0.593  -0.714  -0.908  -0.761  -0.817
130   N         0.478   0.565   0.602   0.233   0.386   0.412   0.099   0.254   0.268
131   E        -0.245  -0.243  -0.125  -0.616  -0.607  -0.428  -0.573  -0.564  -0.410
132   P        -1.066  -1.111  -0.965  -0.980  -1.021  -0.816  -1.020  -1.035  -0.868
133   Q        -0.470  -0.395  -0.496  -0.420  -0.299  -0.487  -0.573  -0.466  -0.576
134   L         0.968   1.028   0.831   0.983   1.074   0.809   0.994   1.086   0.722
135   N        -1.066  -0.988  -0.960  -1.095  -0.951  -0.947  -1.020  -0.933  -0.864
136   V         0.068   0.043  -0.007   0.094   0.032  -0.051  -0.125  -0.184  -0.247
137   I         1.616   1.658   1.746   1.676   1.730   1.873   1.777   1.838   1.990
138   V         0.968   1.000   0.818   1.114   1.168   0.935   0.994   1.041   0.697
139   G         1.616   1.658   1.746   1.595   1.654   1.793   1.777   1.838   1.990
140   K         0.968   0.846   0.811   0.983   0.837   0.782   0.994   0.783   0.685
141   G         1.616   1.658   1.746   1.595   1.654   1.793   1.777   1.838   1.990
142   L         0.478   0.463   0.564   0.188   0.146   0.291   0.099   0.046   0.187
143   H         1.616   1.658   1.746   1.712   1.774   1.909   1.777   1.838   1.990
144   S         1.616   1.658   1.746   1.634   1.701   1.832   1.777   1.838   1.990
145   Q        -0.172  -0.106  -0.086  -0.519  -0.415  -0.412  -0.461  -0.361  -0.352
146   N         0.649   0.650   0.642   0.529   0.526   0.480   0.434   0.420   0.350
147   G         0.649   0.592   0.619   0.598   0.498   0.525   0.434   0.309   0.302
148   I         0.478   0.534   0.586   0.348   0.438   0.497   0.099   0.192   0.233
149   A        -0.230  -0.394  -0.460  -0.195  -0.450  -0.530  -0.237  -0.445  -0.524
150   K         1.616   1.658   1.746   1.542   1.612   1.740   1.777   1.838   1.990
151   L         0.424   0.455   0.562   0.163   0.205   0.372  -0.013   0.031   0.185
152   K         0.351   0.169   0.089   0.401   0.154   0.010   0.322   0.054  -0.084
153   P         0.968   1.000   0.818   1.192   1.236   0.975   0.994   1.041   0.697
154   S        -0.230  -0.263  -0.438  -0.195  -0.250  -0.496  -0.237  -0.273  -0.496
155   I        -0.060  -0.032  -0.028  -0.073  -0.033   0.006  -0.349  -0.304  -0.284
156   E        -0.954  -0.935  -0.914  -0.961  -0.927  -0.902  -0.908  -0.870  -0.816
157   E        -0.470  -0.538  -0.516  -0.597  -0.712  -0.691  -0.573  -0.644  -0.603
158   F        -0.470  -0.523  -0.517  -0.356  -0.414  -0.373  -0.573  -0.632  -0.605
159   C         0.968   0.846   0.811   1.241   1.077   1.010   0.994   0.783   0.685
160   A        -1.662  -1.672  -1.561  -1.553  -1.602  -1.427  -1.244  -1.232  -1.094
161   K        -0.954  -0.901  -0.916  -1.076  -1.025  -1.026  -0.908  -0.849  -0.822
162   H        -1.662  -1.629  -1.548  -1.398  -1.380  -1.244  -1.244  -1.203  -1.085
163   G        -0.470  -0.481  -0.486  -0.469  -0.466  -0.482  -0.573  -0.563  -0.564
164   I         0.649   0.599   0.624   0.538   0.453   0.471   0.434   0.322   0.313
165   R         0.068  -0.015   0.004   0.018  -0.098  -0.090  -0.125  -0.227  -0.228
166   N        -0.954  -0.950  -0.933  -0.722  -0.714  -0.683  -0.908  -0.898  -0.838
167   H        -0.768  -0.788  -0.876  -0.503  -0.576  -0.698  -0.685  -0.709  -0.773
168   L        -0.123  -0.122  -0.081  -0.189  -0.191  -0.149  -0.411  -0.404  -0.350
169   E        -0.768  -0.897  -0.903  -0.615  -0.825  -0.877  -0.685  -0.819  -0.801
170   K        -0.768  -0.721  -0.620  -0.877  -0.827  -0.663  -0.908  -0.844  -0.716
171   G        -0.230  -0.382  -0.458  -0.140  -0.358  -0.490  -0.237  -0.431  -0.522
172   N         1.616   1.658   1.746   1.563   1.628   1.761   1.777   1.838   1.990
173   S        -0.656  -0.628  -0.578  -0.663  -0.663  -0.578  -0.796  -0.761  -0.674
174   G         1.616   1.658   1.746   1.595   1.654   1.793   1.777   1.838   1.990
175   V         0.649   0.561   0.616   0.648   0.488   0.556   0.434   0.246   0.297
176   L        -0.768  -0.721  -0.620  -0.769  -0.699  -0.553  -0.908  -0.844  -0.716
177   V        -0.245  -0.247  -0.127  -0.334  -0.338  -0.157  -0.573  -0.571  -0.413
178   L        -0.060  -0.040  -0.036  -0.122  -0.106  -0.084  -0.349  -0.327  -0.297
179   E        -0.060  -0.134  -0.038  -0.175  -0.266  -0.121  -0.349  -0.425  -0.298
180   L         0.968   1.000   0.818   0.983   1.040   0.788   0.994   1.041   0.697
181   Q        -0.954  -0.902  -0.917  -0.747  -0.668  -0.721  -0.908  -0.854  -0.822
182   G        -0.368  -0.400  -0.470  -0.297  -0.352  -0.485  -0.415  -0.458  -0.536
183   V        -1.049  -1.021  -0.954  -1.089  -1.073  -0.941  -1.000  -0.956  -0.856
184   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
185   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
186   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
187   Q        -1.049  -1.098  -0.969  -1.132  -1.197  -1.009  -1.000  -1.024  -0.869
188   M        -0.580  -0.628  -0.552  -0.602  -0.703  -0.568  -0.707  -0.749  -0.644
189   Q         0.911   0.964   0.798   1.098   1.175   0.904   0.900   0.983   0.659
190   M        -1.390  -1.321  -1.277  -1.189  -1.094  -1.013  -1.146  -1.070  -0.990
191   D        -0.671  -0.668  -0.586  -0.736  -0.737  -0.608  -0.809  -0.793  -0.680
192   -         0.756   0.675   0.683   1.048   0.929   0.918   0.631   0.470   0.433
193   -        -0.675  -0.682  -0.596  -0.885  -0.925  -0.807  -0.801  -0.804  -0.689
194   -        -0.675  -0.620  -0.583  -0.837  -0.765  -0.682  -0.801  -0.726  -0.674
195   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
196   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
197   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
198   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
199   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
200   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
201   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
202   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
203   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
204   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
205   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
206   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
207   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
208   G        -1.390  -1.397  -1.294  -1.252  -1.240  -1.079  -1.146  -1.137  -1.003
209   P        -0.768  -0.741  -0.861  -0.622  -0.593  -0.766  -0.685  -0.644  -0.758
210   A        -1.662  -1.652  -1.557  -1.454  -1.398  -1.299  -1.244  -1.220  -1.091
211   V        -0.954  -0.991  -0.926  -0.787  -0.853  -0.749  -0.908  -0.928  -0.830
212   N        -1.066  -1.001  -0.960  -1.269  -1.183  -1.119  -1.020  -0.949  -0.864
213   A        -1.364  -1.295  -1.266  -1.455  -1.355  -1.287  -1.132  -1.058  -0.983
214   P         1.616   1.658   1.746   1.768   1.827   1.965   1.777   1.838   1.990
215   T        -1.252  -1.214  -1.231  -1.231  -1.175  -1.182  -1.020  -0.970  -0.951
216   N        -0.230  -0.325  -0.442  -0.260  -0.396  -0.557  -0.237  -0.358  -0.502
217   Q        -0.768  -0.780  -0.876  -0.737  -0.751  -0.906  -0.685  -0.686  -0.774
218   Y         0.351   0.305   0.110   0.574   0.520   0.212   0.322   0.257  -0.053
219   N        -0.921  -0.951  -0.937  -1.053  -1.116  -1.074  -0.853  -0.879  -0.836
220   A        -0.368  -0.388  -0.487  -0.356  -0.401  -0.593  -0.415  -0.432  -0.557
221   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
222   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
223   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
224   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
225   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
226   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
227   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
228   Q        -0.368  -0.239  -0.462  -0.483  -0.301  -0.625  -0.415  -0.244  -0.527
229   P        -0.543  -0.459  -0.510  -0.691  -0.568  -0.600  -0.685  -0.590  -0.602
230   H         0.068  -0.027  -0.007  -0.091  -0.206  -0.176  -0.125  -0.247  -0.243
231   P         0.351   0.305   0.110   0.633   0.570   0.269   0.322   0.257  -0.053
232   Q         0.968   1.028   0.831   0.852   0.945   0.691   0.994   1.086   0.722
233   Y         0.649   0.561   0.616   0.708   0.551   0.618   0.434   0.246   0.297
234   N        -0.921  -0.945  -0.919  -0.994  -1.025  -0.984  -0.853  -0.872  -0.818
235   N         0.247   0.178   0.081   0.171   0.095  -0.057   0.169   0.062  -0.097
236   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
237   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
238   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
239   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
240   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
241   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
242   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
243   Q         1.616   1.658   1.746   1.406   1.477   1.606   1.777   1.838   1.990
244   P        -0.954  -1.004  -0.933  -0.822  -0.883  -0.823  -0.908  -0.935  -0.836
245   Q        -0.470  -0.499  -0.515  -0.441  -0.506  -0.537  -0.573  -0.602  -0.600
246   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
247   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
248   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
249   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
250   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
251   G        -1.390  -1.283  -1.272  -1.483  -1.331  -1.300  -1.146  -1.033  -0.986
252   Q         1.616   1.658   1.746   1.390   1.454   1.590   1.777   1.838   1.990
253   A        -0.921  -0.763  -0.903  -0.942  -0.702  -0.956  -0.853  -0.667  -0.801
254   Q         0.247   0.239   0.069   0.147   0.148  -0.095   0.169   0.160  -0.116
255   N        -0.028  -0.003  -0.032  -0.321  -0.268  -0.321  -0.269  -0.222  -0.279
256   Y        -0.240  -0.193  -0.113  -0.414  -0.349  -0.245  -0.561  -0.494  -0.392
257   N        -0.111  -0.087  -0.052  -0.434  -0.376  -0.308  -0.415  -0.374  -0.316
258   N         0.247   0.342   0.082   0.133   0.264  -0.100   0.169   0.309  -0.096
259   S         0.911   0.930   0.779   0.752   0.789   0.570   0.900   0.926   0.622
260   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
261   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
262   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
263   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
264   G        -1.662  -1.650  -1.556  -1.626  -1.572  -1.447  -1.244  -1.218  -1.090
265   N        -1.364  -1.380  -1.280  -1.392  -1.434  -1.270  -1.132  -1.125  -0.994
266   D        -0.954  -0.894  -0.919  -0.950  -0.850  -0.890  -0.908  -0.841  -0.825
267   N        -1.066  -1.015  -0.966  -0.962  -0.890  -0.817  -1.020  -0.952  -0.868
268   K        -1.662  -1.674  -1.563  -1.538  -1.517  -1.401  -1.244  -1.233  -1.095
269   D        -1.364  -1.380  -1.280  -1.373  -1.421  -1.251  -1.132  -1.125  -0.994
270   S        -1.066  -1.091  -0.967  -1.116  -1.144  -0.966  -1.020  -1.020  -0.870
271   T        -0.470  -0.473  -0.513  -0.455  -0.469  -0.497  -0.573  -0.586  -0.601
272   L        -0.656  -0.591  -0.559  -0.855  -0.770  -0.703  -0.796  -0.712  -0.653
273   T        -0.954  -0.982  -0.939  -0.841  -0.866  -0.831  -0.908  -0.924  -0.843
274   S        -1.364  -1.380  -1.280  -1.302  -1.352  -1.222  -1.132  -1.125  -0.994
275   I        -0.656  -0.638  -0.581  -0.650  -0.592  -0.509  -0.796  -0.770  -0.678
276   F        -0.543  -0.486  -0.514  -0.509  -0.377  -0.434  -0.685  -0.600  -0.604
277   K        -0.768  -0.788  -0.867  -0.623  -0.642  -0.763  -0.685  -0.704  -0.763
278   I        -1.252  -1.272  -1.239  -0.971  -1.033  -0.965  -1.020  -1.031  -0.958
279   F        -0.470  -0.403  -0.496  -0.357  -0.254  -0.353  -0.573  -0.477  -0.577
280   C         0.968   0.846   0.811   1.240   1.076   1.009   0.994   0.783   0.685
281   N        -1.960  -1.917  -1.806  -1.617  -1.519  -1.396  -1.356  -1.307  -1.169
282   C         1.616   1.658   1.746   1.818   1.877   2.015   1.777   1.838   1.990
283   I        -0.580  -0.601  -0.548  -0.548  -0.563  -0.487  -0.707  -0.723  -0.639
284   Q        -0.580  -0.622  -0.548  -0.823  -0.891  -0.807  -0.707  -0.737  -0.637
285   S        -0.198  -0.191  -0.100  -0.457  -0.450  -0.320  -0.514  -0.498  -0.377
286   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
287   L        -1.068  -1.064  -0.966  -1.045  -1.036  -0.892  -1.008  -0.990  -0.864
288   A        -0.060  -0.041  -0.034  -0.140  -0.092  -0.078  -0.349  -0.329  -0.294
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q08954
Output conservation file - output/Q08954
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
