1     M         2.348   2.398   2.512   2.614   2.689   2.867   2.670   2.754   2.966
2     R        -0.928  -0.976  -0.921  -0.722  -0.806  -0.710  -0.814  -0.846  -0.771
3     S        -0.091  -0.058  -0.220  -0.326  -0.275  -0.494  -0.081  -0.045  -0.247
4     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
9     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
10    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
11    -        -1.054  -1.027  -0.955  -0.953  -0.902  -0.798  -0.924  -0.891  -0.802
12    -         0.118   0.182   0.207  -0.492  -0.417  -0.364  -0.205  -0.124  -0.090
13    -        -0.583  -0.551  -0.475  -0.472  -0.430  -0.304  -0.700  -0.660  -0.566
14    S        -0.928  -0.883  -0.880  -1.075  -1.026  -1.012  -0.814  -0.765  -0.734
15    L        -0.928  -0.897  -0.884  -0.695  -0.600  -0.625  -0.814  -0.779  -0.737
16    L        -1.347  -1.302  -1.284  -1.288  -1.199  -1.190  -0.998  -0.951  -0.906
17    T        -1.765  -1.723  -1.680  -1.697  -1.594  -1.563  -1.181  -1.139  -1.071
18    L        -0.091  -0.162  -0.248  -0.368  -0.475  -0.594  -0.081  -0.183  -0.284
19    P         1.481   1.405   1.353   1.791   1.699   1.636   1.570   1.429   1.303
20    K        -0.352  -0.375  -0.366  -0.240  -0.247  -0.280  -0.447  -0.468  -0.447
21    S         0.067   0.084   0.163  -0.178  -0.142  -0.032  -0.264  -0.246  -0.149
22    F         2.348   2.398   2.512   2.278   2.351   2.521   2.670   2.754   2.966
23    L         1.083   1.187   1.139   0.511   0.665   0.560   0.836   1.020   0.870
24    G         1.481   1.530   1.372   1.625   1.695   1.460   1.570   1.647   1.339
25    F         0.664   0.728   0.504   0.755   0.849   0.534   0.653   0.748   0.391
26    M        -0.463  -0.426  -0.402  -0.449  -0.349  -0.340  -0.575  -0.531  -0.486
27    P         1.083   1.013   1.076   1.095   0.920   0.988   0.836   0.669   0.735
28    L         2.348   2.398   2.512   1.912   1.973   2.145   2.670   2.754   2.966
29    Y        -0.091  -0.220  -0.268   0.235   0.065  -0.022  -0.081  -0.251  -0.310
30    L        -0.352  -0.408  -0.364  -0.676  -0.695  -0.660  -0.447  -0.492  -0.437
31    A         1.481   1.642   1.392   1.665   1.872   1.559   1.570   1.833   1.379
32    V         0.664   0.491   0.423   0.891   0.667   0.576   0.653   0.384   0.262
33    E         2.348   2.398   2.512   2.543   2.622   2.794   2.670   2.754   2.966
34    I         0.067   0.083   0.153  -0.431  -0.446  -0.355  -0.264  -0.247  -0.163
35    V         0.328   0.463   0.356   0.227   0.451   0.290   0.103   0.323   0.150
36    L         0.664   0.491   0.423   0.362   0.107   0.008   0.653   0.384   0.262
37    G        -0.091  -0.224  -0.276   0.125  -0.099  -0.184  -0.081  -0.256  -0.320
38    I        -0.352  -0.452  -0.374  -0.498  -0.667  -0.551  -0.447  -0.552  -0.457
39    S        -0.510  -0.424  -0.420  -0.875  -0.777  -0.757  -0.631  -0.543  -0.513
40    I         0.664   0.597   0.457   0.749   0.660   0.447   0.653   0.545   0.316
41    L         0.067   0.061   0.147  -0.589  -0.583  -0.452  -0.264  -0.280  -0.171
42    N         2.348   2.398   2.512   2.521   2.605   2.771   2.670   2.754   2.966
43    K         1.481   1.402   1.349   1.738   1.658   1.579   1.570   1.424   1.294
44    C        -0.928  -0.976  -0.921  -0.681  -0.784  -0.703  -0.814  -0.846  -0.771
45    S         0.664   0.609   0.476   0.672   0.593   0.409   0.653   0.562   0.346
46    G         2.348   2.398   2.512   2.434   2.505   2.681   2.670   2.754   2.966
47    A        -0.928  -0.976  -0.921  -0.919  -1.052  -0.933  -0.814  -0.846  -0.771
48    Y         2.348   2.398   2.512   2.464   2.543   2.712   2.670   2.754   2.966
49    G         2.348   2.398   2.512   2.434   2.505   2.681   2.670   2.754   2.966
50    I         1.481   1.530   1.372   1.506   1.579   1.360   1.570   1.647   1.339
51    L         1.481   1.405   1.353   1.130   1.022   0.951   1.570   1.429   1.303
52    A         0.904   0.930   1.027   0.605   0.617   0.762   0.469   0.495   0.628
53    L         1.481   1.543   1.389   1.115   1.192   0.980   1.570   1.669   1.372
54    F         1.481   1.543   1.389   1.485   1.574   1.356   1.570   1.669   1.372
55    T         1.481   1.405   1.353   1.644   1.570   1.489   1.570   1.429   1.303
56    G         1.481   1.405   1.353   1.679   1.590   1.524   1.570   1.429   1.303
57    H         0.664   0.491   0.423   1.054   0.786   0.645   0.653   0.384   0.262
58    P         1.481   1.405   1.353   1.795   1.706   1.644   1.570   1.429   1.303
59    L         0.664   0.617   0.483   0.362   0.290   0.098   0.653   0.574   0.357
60    D         0.067   0.073   0.153   0.006  -0.028   0.090  -0.264  -0.263  -0.162
61    F        -0.091  -0.162  -0.248  -0.041  -0.182  -0.302  -0.081  -0.183  -0.284
62    M        -0.352  -0.333  -0.351  -0.123  -0.112  -0.160  -0.447  -0.405  -0.421
63    Q         2.348   2.398   2.512   2.517   2.599   2.767   2.670   2.754   2.966
64    W         0.664   0.491   0.423   1.062   0.809   0.679   0.653   0.384   0.262
65    I        -0.352  -0.333  -0.351  -0.849  -0.832  -0.849  -0.447  -0.405  -0.421
66    A        -1.347  -1.318  -1.319  -1.260  -1.243  -1.252  -0.998  -0.968  -0.935
67    Y         1.083   1.145   1.158   1.136   1.241   1.237   0.836   0.938   0.908
68    L        -0.352  -0.373  -0.357  -0.859  -0.893  -0.861  -0.447  -0.466  -0.437
69    W         0.225   0.196   0.249  -0.086  -0.179  -0.099  -0.081  -0.105  -0.033
70    S         1.083   1.145   1.158   0.850   0.936   0.945   0.836   0.938   0.908
71    V         0.904   0.951   1.037   0.602   0.673   0.790   0.469   0.538   0.650
72    F         0.225   0.290   0.269  -0.345  -0.288  -0.304  -0.081   0.010  -0.003
73    T        -0.352  -0.404  -0.371  -0.175  -0.229  -0.157  -0.447  -0.507  -0.454
74    L         1.481   1.402   1.349   1.130   1.018   0.943   1.570   1.424   1.294
75    I        -0.352  -0.382  -0.372  -0.301  -0.338  -0.310  -0.447  -0.474  -0.450
76    V         0.328   0.237   0.274   0.103  -0.100  -0.081   0.103  -0.033   0.006
77    F         0.328   0.285   0.299   0.146   0.063   0.052   0.103   0.051   0.054
78    S        -0.352  -0.375  -0.366  -0.528  -0.560  -0.534  -0.447  -0.468  -0.447
79    Q        -0.352  -0.408  -0.364  -0.311  -0.358  -0.279  -0.447  -0.492  -0.437
80    G         0.328   0.303   0.279   0.160   0.014   0.007   0.103   0.034   0.014
81    L         0.328   0.233   0.266  -0.165  -0.305  -0.243   0.103  -0.039  -0.008
82    Y        -0.770  -0.675  -0.819  -0.564  -0.420  -0.611  -0.631  -0.527  -0.663
83    L        -0.770  -0.579  -0.779  -0.313   0.006  -0.332  -0.631  -0.410  -0.620
84    I         0.328   0.383   0.326  -0.000   0.093  -0.022   0.103   0.184   0.096
85    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
86    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
87    H        -0.928  -0.921  -0.893  -0.456  -0.438  -0.386  -0.814  -0.795  -0.743
88    K         0.664   0.614   0.474   1.035   0.993   0.807   0.653   0.570   0.344
89    P        -0.770  -0.855  -0.874  -0.350  -0.497  -0.509  -0.631  -0.720  -0.721
90    N         0.225   0.335   0.277   0.105   0.227   0.194  -0.081   0.054  -0.001
91    L        -0.770  -0.865  -0.854  -1.067  -1.188  -1.170  -0.631  -0.730  -0.701
92    L        -0.928  -0.944  -0.904  -1.059  -1.054  -1.015  -0.814  -0.821  -0.756
93    V        -0.928  -0.976  -0.921  -0.790  -0.806  -0.769  -0.814  -0.846  -0.771
94    F        -0.928  -0.976  -0.921  -0.829  -0.855  -0.750  -0.814  -0.846  -0.771
95    S         1.083   1.013   1.076   0.646   0.444   0.500   0.836   0.669   0.735
96    Q        -0.928  -0.976  -0.921  -1.074  -1.157  -1.059  -0.814  -0.846  -0.771
97    I        -0.510  -0.454  -0.433  -0.893  -0.873  -0.804  -0.631  -0.561  -0.522
98    C        -0.928  -0.943  -0.876  -0.799  -0.810  -0.734  -0.814  -0.820  -0.730
99    V        -0.928  -0.915  -0.887  -1.091  -1.059  -1.056  -0.814  -0.789  -0.737
100   L         0.328   0.434   0.309   0.103   0.236   0.015   0.103   0.238   0.058
101   Y         1.083   1.179   1.149   1.046   1.212   1.112   0.836   1.005   0.890
102   T        -0.928  -0.976  -0.921  -1.046  -1.159  -1.090  -0.814  -0.846  -0.771
103   I        -0.352  -0.272  -0.318  -0.509  -0.382  -0.478  -0.447  -0.340  -0.390
104   D         2.348   2.398   2.512   2.547   2.629   2.798   2.670   2.754   2.966
105   T         0.664   0.612   0.488   0.803   0.738   0.515   0.653   0.566   0.365
106   I        -0.510  -0.452  -0.428  -0.974  -0.951  -0.864  -0.631  -0.560  -0.519
107   S        -0.091   0.057  -0.169  -0.441  -0.231  -0.578  -0.081   0.116  -0.180
108   T        -0.510  -0.454  -0.433  -0.501  -0.383  -0.381  -0.631  -0.561  -0.522
109   C        -0.770  -0.855  -0.874  -0.530  -0.703  -0.826  -0.631  -0.720  -0.721
110   F        -0.352  -0.333  -0.351  -0.811  -0.778  -0.794  -0.447  -0.405  -0.421
111   F         0.904   0.957   1.041   0.678   0.772   0.878   0.469   0.551   0.660
112   T         0.664   0.597   0.457   0.915   0.838   0.646   0.653   0.545   0.316
113   L        -0.091  -0.224  -0.276  -0.386  -0.581  -0.661  -0.081  -0.256  -0.320
114   W        -0.352  -0.449  -0.397  -0.228  -0.421  -0.374  -0.447  -0.548  -0.480
115   F         2.348   2.398   2.512   2.278   2.351   2.521   2.670   2.754   2.966
116   T        -0.928  -0.827  -0.884  -1.049  -0.862  -1.020  -0.814  -0.708  -0.738
117   T        -0.510  -0.523  -0.428  -0.614  -0.658  -0.517  -0.631  -0.633  -0.518
118   Q        -0.928  -0.976  -0.921  -0.880  -0.967  -0.886  -0.814  -0.846  -0.771
119   W         2.348   2.398   2.512   2.625   2.707   2.878   2.670   2.754   2.966
120   F         1.481   1.402   1.349   1.515   1.420   1.345   1.570   1.424   1.294
121   T         0.514   0.518   0.416   0.331   0.318   0.130   0.424   0.423   0.250
122   L        -1.440  -1.415  -1.348  -1.371  -1.304  -1.228  -1.074  -1.043  -0.959
123   E         1.290   1.219   1.236   1.491   1.387   1.406   1.232   1.082   1.069
124   D        -0.951  -0.944  -0.890  -0.684  -0.706  -0.590  -0.824  -0.815  -0.738
125   T        -0.951  -0.949  -0.909  -0.827  -0.778  -0.735  -0.824  -0.820  -0.758
126   A        -0.951  -0.987  -0.940  -0.788  -0.828  -0.768  -0.824  -0.854  -0.787
127   N        -0.463  -0.410  -0.410  -0.251  -0.158  -0.154  -0.575  -0.504  -0.493
128   I        -1.440  -1.390  -1.348  -1.185  -1.078  -1.037  -1.074  -1.024  -0.959
129   -        -0.583  -0.547  -0.475  -0.786  -0.726  -0.627  -0.700  -0.656  -0.566
130   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
131   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
132   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
133   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
134   D        -0.468  -0.339  -0.389  -0.409  -0.231  -0.278  -0.565  -0.407  -0.464
135   G        -0.468  -0.396  -0.387  -0.326  -0.210  -0.201  -0.565  -0.478  -0.461
136   N        -0.468  -0.339  -0.389  -0.252  -0.084  -0.119  -0.565  -0.407  -0.464
137   N        -0.468  -0.444  -0.401  -0.260  -0.220  -0.155  -0.565  -0.540  -0.479
138   A        -0.951  -0.967  -0.912  -0.959  -1.043  -0.927  -0.824  -0.837  -0.760
139   L        -0.468  -0.481  -0.425  -0.868  -0.876  -0.779  -0.565  -0.578  -0.508
140   Q        -0.468  -0.445  -0.397  -0.267  -0.223  -0.158  -0.565  -0.535  -0.474
141   S         0.514   0.524   0.411   0.535   0.548   0.407   0.424   0.435   0.243
142   N         0.514   0.585   0.444   0.750   0.839   0.664   0.424   0.517   0.295
143   P        -0.463  -0.420  -0.414  -0.397  -0.374  -0.316  -0.575  -0.513  -0.498
144   I        -0.951  -0.945  -0.890  -0.873  -0.871  -0.772  -0.824  -0.815  -0.738
145   S         0.210   0.249   0.278   0.040   0.101   0.157  -0.076  -0.008   0.018
146   T        -0.091  -0.060  -0.194   0.197   0.260   0.067  -0.081  -0.046  -0.213
147   G        -0.352  -0.362  -0.317  -0.335  -0.314  -0.268  -0.447  -0.446  -0.389
148   K        -0.928  -0.788  -0.876  -0.755  -0.548  -0.648  -0.814  -0.677  -0.730
149   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
150   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
151   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
152   L        -0.583  -0.532  -0.475  -0.860  -0.746  -0.703  -0.700  -0.641  -0.566
153   T        -1.347  -1.349  -1.310  -0.986  -0.957  -0.906  -0.998  -0.993  -0.928
154   E        -1.347  -1.201  -1.290  -0.956  -0.724  -0.863  -0.998  -0.855  -0.911
155   R         0.328   0.474   0.397   0.245   0.455   0.371   0.103   0.338   0.214
156   G        -0.770  -0.808  -0.830  -0.651  -0.697  -0.707  -0.631  -0.674  -0.676
157   I        -1.765  -1.723  -1.680  -1.414  -1.301  -1.272  -1.181  -1.139  -1.071
158   D        -1.347  -1.382  -1.335  -1.083  -1.152  -1.099  -0.998  -1.018  -0.948
159   I        -0.770  -0.808  -0.830  -0.885  -0.899  -0.907  -0.631  -0.674  -0.676
160   S        -0.352  -0.364  -0.325  -0.407  -0.408  -0.343  -0.447  -0.448  -0.399
161   K         0.328   0.371   0.291  -0.059  -0.106  -0.166   0.103   0.115   0.033
162   Q        -0.352  -0.404  -0.371  -0.217  -0.322  -0.270  -0.447  -0.507  -0.454
163   S        -0.091  -0.162  -0.248  -0.010  -0.109  -0.214  -0.081  -0.183  -0.284
164   A         1.481   1.405   1.353   1.585   1.459   1.353   1.570   1.429   1.303
165   T        -0.091  -0.151  -0.249  -0.098  -0.209  -0.344  -0.081  -0.170  -0.284
166   E        -1.347  -1.382  -1.335  -1.028  -1.112  -1.030  -0.998  -1.018  -0.948
167   S        -1.347  -1.311  -1.295  -1.050  -0.994  -0.962  -0.998  -0.962  -0.915
168   Y        -0.352  -0.449  -0.397  -0.086  -0.196  -0.107  -0.447  -0.548  -0.480
169   E         2.348   2.398   2.512   2.543   2.622   2.794   2.670   2.754   2.966
170   Y        -0.510  -0.454  -0.433  -0.968  -0.908  -0.874  -0.631  -0.561  -0.522
171   T        -0.352  -0.408  -0.364  -0.414  -0.478  -0.421  -0.447  -0.492  -0.437
172   M        -1.347  -1.311  -1.295  -1.375  -1.326  -1.254  -0.998  -0.962  -0.915
173   T         0.328   0.289   0.266   0.217   0.110   0.064   0.103   0.017  -0.005
174   I         0.067   0.121   0.164  -0.389  -0.317  -0.210  -0.264  -0.191  -0.147
175   L        -0.091  -0.120  -0.256  -0.312  -0.340  -0.521  -0.081  -0.121  -0.293
176   I        -0.770  -0.570  -0.763  -1.069  -0.777  -1.056  -0.631  -0.399  -0.603
177   T         0.664   0.491   0.423   0.768   0.500   0.337   0.653   0.384   0.262
178   L         0.225   0.194   0.248  -0.315  -0.319  -0.240  -0.081  -0.107  -0.035
179   V        -0.770  -0.855  -0.874  -0.687  -0.836  -0.895  -0.631  -0.720  -0.721
180   S        -1.347  -1.201  -1.290  -1.275  -1.037  -1.184  -0.998  -0.855  -0.911
181   L         0.225   0.196   0.249  -0.205  -0.184  -0.111  -0.081  -0.105  -0.033
182   I        -1.765  -1.723  -1.680  -1.797  -1.841  -1.666  -1.181  -1.139  -1.071
183   F        -0.352  -0.332  -0.349  -0.605  -0.580  -0.631  -0.447  -0.403  -0.418
184   R         1.481   1.405   1.353   1.779   1.687   1.621   1.570   1.429   1.303
185   F        -0.091  -0.055  -0.192  -0.068  -0.035  -0.245  -0.081  -0.040  -0.209
186   Y         2.348   2.398   2.512   2.464   2.543   2.712   2.670   2.754   2.966
187   F         2.348   2.398   2.512   2.278   2.351   2.521   2.670   2.754   2.966
188   N        -0.352  -0.449  -0.397  -0.191  -0.320  -0.257  -0.447  -0.548  -0.480
189   F         0.904   0.990   1.062   0.211   0.329   0.428   0.469   0.621   0.705
190   I         0.904   0.930   1.024   0.585   0.615   0.752   0.469   0.494   0.623
191   L        -0.510  -0.511  -0.423  -0.931  -0.865  -0.742  -0.631  -0.619  -0.512
192   A        -0.928  -0.925  -0.892  -1.056  -1.068  -1.008  -0.814  -0.798  -0.743
193   S         1.083   1.064   1.081   0.850   0.801   0.814   0.836   0.774   0.744
194   F         1.083   1.013   1.076   0.940   0.816   0.896   0.836   0.669   0.735
195   V        -0.928  -0.924  -0.891  -0.824  -0.820  -0.749  -0.814  -0.797  -0.741
196   Q        -0.352  -0.449  -0.397  -0.078  -0.181  -0.110  -0.447  -0.548  -0.480
197   E        -0.928  -0.924  -0.891  -0.604  -0.589  -0.528  -0.814  -0.797  -0.741
198   L         1.481   1.402   1.349   1.130   1.018   0.943   1.570   1.424   1.294
199   L         0.664   0.491   0.423   0.347   0.087  -0.020   0.653   0.384   0.262
200   H        -0.928  -0.938  -0.902  -0.543  -0.561  -0.470  -0.814  -0.817  -0.754
201   H        -0.463  -0.496  -0.440  -0.225  -0.266  -0.207  -0.575  -0.603  -0.528
202   P        -0.951  -0.987  -0.940  -0.647  -0.745  -0.641  -0.824  -0.854  -0.787
203   K        -0.279  -0.356  -0.383  -0.144  -0.264  -0.356  -0.325  -0.428  -0.456
204   Y        -0.951  -0.987  -0.940  -0.972  -1.077  -1.013  -0.824  -0.854  -0.787
205   L        -1.054  -1.024  -0.955  -0.977  -0.900  -0.823  -0.924  -0.888  -0.802
206   V        -0.468  -0.502  -0.457  -0.403  -0.451  -0.377  -0.565  -0.603  -0.546
207   D         0.225   0.285   0.272   0.364   0.463   0.466  -0.081   0.005   0.001
208   R        -0.352  -0.293  -0.351  -0.099  -0.005  -0.062  -0.447  -0.373  -0.428
209   D        -0.352  -0.451  -0.371  -0.084  -0.209  -0.099  -0.447  -0.551  -0.453
210   D         1.481   1.405   1.353   1.791   1.711   1.637   1.570   1.429   1.303
211   V        -0.279  -0.369  -0.362  -0.285  -0.456  -0.466  -0.325  -0.441  -0.429
212   E        -0.279  -0.401  -0.383   0.097  -0.067  -0.044  -0.325  -0.480  -0.456
213   Q        -0.951  -1.004  -0.940  -0.708  -0.800  -0.701  -0.824  -0.869  -0.787
214   N         0.210   0.290   0.259   0.326   0.419   0.406  -0.076   0.008  -0.016
215   L        -0.279  -0.401  -0.383  -0.581  -0.729  -0.691  -0.325  -0.480  -0.456
216   K        -0.463  -0.452  -0.410  -0.426  -0.431  -0.336  -0.575  -0.551  -0.493
217   N         0.210   0.185   0.216   0.228   0.167   0.197  -0.076  -0.121  -0.077
218   K         0.067   0.135   0.209   0.100   0.206   0.312  -0.264  -0.172  -0.081
219   P        -0.510  -0.522  -0.423  -0.501  -0.496  -0.360  -0.631  -0.632  -0.515
220   I        -0.510  -0.432  -0.423  -0.896  -0.806  -0.768  -0.631  -0.550  -0.515
221   -        -0.583  -0.551  -0.475  -0.507  -0.458  -0.341  -0.700  -0.660  -0.566
222   -        -0.583  -0.551  -0.475  -0.856  -0.863  -0.699  -0.700  -0.660  -0.566
223   -        -0.583  -0.551  -0.475  -0.783  -0.776  -0.624  -0.700  -0.660  -0.566
224   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
225   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
226   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
227   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
228   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
229   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
230   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
231   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
232   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
233   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
234   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
235   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
236   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
237   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
238   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
239   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
240   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
241   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
242   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
243   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
244   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
245   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
246   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
247   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
248   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
249   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
250   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
251   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
252   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
253   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
254   W        -1.347  -1.201  -1.290  -1.088  -0.831  -1.016  -0.998  -0.855  -0.911
255   K        -0.091  -0.130  -0.234   0.240   0.194   0.028  -0.081  -0.133  -0.265
256   R         0.225   0.188   0.253   0.338   0.311   0.414  -0.081  -0.119  -0.031
257   L        -0.928  -0.884  -0.879  -0.676  -0.574  -0.608  -0.814  -0.767  -0.733
258   W        -0.510  -0.465  -0.419  -0.299  -0.245  -0.160  -0.631  -0.575  -0.508
259   A        -1.347  -1.311  -1.295  -1.054  -0.983  -0.970  -0.998  -0.962  -0.915
260   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
261   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
262   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
263   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
264   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
265   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
266   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
267   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
268   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
269   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
270   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
271   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
272   K        -0.352  -0.449  -0.397  -0.063  -0.163  -0.088  -0.447  -0.548  -0.480
273   S        -0.928  -0.917  -0.884  -1.158  -1.097  -1.080  -0.814  -0.790  -0.735
274   Q         0.328   0.363   0.351   0.517   0.605   0.569   0.103   0.179   0.142
275   K        -0.770  -0.855  -0.874  -0.315  -0.411  -0.434  -0.631  -0.720  -0.721
276   G        -0.951  -0.829  -0.879  -0.616  -0.399  -0.504  -0.824  -0.691  -0.727
277   C         0.225   0.194   0.248   0.203   0.143   0.235  -0.081  -0.107  -0.035
278   Y        -0.928  -0.976  -0.921  -0.727  -0.780  -0.714  -0.814  -0.846  -0.771
279   K        -0.352  -0.242  -0.311  -0.070   0.127   0.030  -0.447  -0.293  -0.371
280   L        -0.091  -0.120  -0.256  -0.365  -0.423  -0.600  -0.081  -0.121  -0.293
281   C        -0.352  -0.449  -0.397  -0.271  -0.411  -0.353  -0.447  -0.548  -0.480
282   K        -0.928  -0.974  -0.886  -0.555  -0.599  -0.464  -0.814  -0.845  -0.740
283   N        -0.352  -0.200  -0.310  -0.008   0.211   0.085  -0.447  -0.256  -0.381
284   L        -0.091   0.040  -0.166  -0.359  -0.180  -0.463  -0.081   0.094  -0.176
285   L        -0.352  -0.449  -0.397  -0.685  -0.762  -0.662  -0.447  -0.548  -0.480
286   E        -1.440  -1.403  -1.348  -1.105  -1.059  -0.954  -1.074  -1.034  -0.959
287   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
288   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
289   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
290   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
291   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
292   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q06346
Output conservation file - output/Q06346
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
