1     M         1.606   1.609   1.630   1.873   1.879   1.911   1.703   1.707   1.732
2     L         1.606   1.609   1.630   1.315   1.319   1.352   1.703   1.707   1.732
3     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     F         1.606   1.609   1.630   1.721   1.731   1.759   1.703   1.707   1.732
5     K         1.606   1.609   1.630   1.644   1.650   1.681   1.703   1.707   1.732
6     Q         1.606   1.609   1.630   1.760   1.767   1.797   1.703   1.707   1.732
7     W         1.606   1.609   1.630   1.918   1.924   1.955   1.703   1.707   1.732
8     N         0.037   0.007  -0.010   0.136   0.089   0.064  -0.090  -0.138  -0.164
9     D        -1.102  -1.099  -1.079  -1.039  -1.033  -0.999  -0.987  -0.981  -0.946
10    L         0.037   0.007  -0.010  -0.245  -0.290  -0.309  -0.090  -0.138  -0.164
11    P        -1.102  -1.099  -1.079  -1.097  -1.082  -1.057  -0.987  -0.981  -0.946
12    E         0.037   0.007  -0.010  -0.003  -0.053  -0.079  -0.090  -0.138  -0.164
13    P         1.606   1.609   1.630   1.605   1.611   1.642   1.703   1.707   1.732
14    K         0.037   0.069   0.008   0.257   0.314   0.202  -0.090  -0.039  -0.135
15    H         0.037   0.044   0.000   0.315   0.326   0.245  -0.090  -0.079  -0.148
16    L        -1.102  -1.099  -1.079  -0.991  -0.974  -0.951  -0.987  -0.981  -0.946
17    L         0.037   0.007  -0.010  -0.311  -0.363  -0.386  -0.090  -0.138  -0.164
18    D         1.606   1.609   1.630   1.667   1.673   1.705   1.703   1.707   1.732
19    L        -0.103  -0.101  -0.080  -0.285  -0.282  -0.246  -0.314  -0.311  -0.276
20    P         1.606   1.609   1.630   1.605   1.611   1.642   1.703   1.707   1.732
21    E        -1.102  -1.099  -1.079  -1.044  -1.039  -1.004  -0.987  -0.981  -0.946
22    I        -1.102  -1.099  -1.079  -1.305  -1.298  -1.265  -0.987  -0.981  -0.946
23    S        -1.102  -1.099  -1.079  -1.063  -1.047  -1.023  -0.987  -0.981  -0.946
24    K        -1.102  -1.099  -1.079  -1.122  -1.121  -1.082  -0.987  -0.981  -0.946
25    N         0.037   0.007  -0.010   0.094   0.043   0.014  -0.090  -0.138  -0.164
26    L        -1.102  -1.099  -1.079  -1.321  -1.307  -1.280  -0.987  -0.981  -0.946
27    Q        -1.102  -1.099  -1.079  -0.884  -0.875  -0.844  -0.987  -0.981  -0.946
28    S         1.606   1.609   1.630   1.470   1.480   1.507   1.703   1.707   1.732
29    L         1.606   1.609   1.630   1.315   1.319   1.352   1.703   1.707   1.732
30    E        -1.102  -1.099  -1.079  -0.996  -0.990  -0.956  -0.987  -0.981  -0.946
31    V        -1.102  -1.099  -1.079  -1.207  -1.202  -1.167  -0.987  -0.981  -0.946
32    C        -1.102  -1.099  -1.079  -1.082  -1.083  -1.042  -0.987  -0.981  -0.946
33    P         0.037   0.007  -0.010  -0.024  -0.078  -0.109  -0.090  -0.138  -0.164
34    V        -1.102  -1.099  -1.079  -1.284  -1.284  -1.244  -0.987  -0.981  -0.946
35    P         1.606   1.609   1.630   1.605   1.611   1.642   1.703   1.707   1.732
36    K        -1.102  -1.099  -1.079  -1.073  -1.071  -1.033  -0.987  -0.981  -0.946
37    V         1.606   1.609   1.630   1.659   1.662   1.697   1.703   1.707   1.732
38    E        -1.102  -1.099  -1.079  -0.954  -0.953  -0.914  -0.987  -0.981  -0.946
39    F         0.037   0.069   0.008  -0.017   0.032  -0.058  -0.090  -0.039  -0.135
40    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
41    P         1.606   1.609   1.630   1.605   1.611   1.642   1.703   1.707   1.732
42    Q        -1.102  -1.099  -1.079  -0.991  -0.991  -0.951  -0.987  -0.981  -0.946
43    D        -1.102  -1.099  -1.079  -1.171  -1.170  -1.131  -0.987  -0.981  -0.946
44    L         1.606   1.609   1.630   1.315   1.319   1.352   1.703   1.707   1.732
45    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
46    D         0.037   0.044   0.000   0.041   0.053  -0.027  -0.090  -0.079  -0.148
47    V        -1.102  -1.099  -1.079  -1.034  -1.036  -0.994  -0.987  -0.981  -0.946
48    P        -1.102  -1.099  -1.079  -1.107  -1.102  -1.067  -0.987  -0.981  -0.946
49    Q        -1.102  -1.099  -1.079  -0.968  -0.967  -0.928  -0.987  -0.981  -0.946
50    Y         0.037   0.044   0.000   0.237   0.247   0.168  -0.090  -0.079  -0.148
51    S        -1.102  -1.099  -1.079  -1.122  -1.107  -1.082  -0.987  -0.981  -0.946
52    T        -1.102  -1.099  -1.079  -0.780  -0.766  -0.741  -0.987  -0.981  -0.946
53    A        -1.102  -1.099  -1.079  -0.758  -0.751  -0.719  -0.987  -0.981  -0.946
54    V         0.037   0.069   0.008  -0.046   0.001  -0.091  -0.090  -0.039  -0.135
55    I        -1.102  -1.099  -1.079  -1.305  -1.298  -1.265  -0.987  -0.981  -0.946
56    T         0.037   0.007  -0.010  -0.176  -0.240  -0.281  -0.090  -0.138  -0.164
57    T         0.037   0.007  -0.010  -0.043  -0.095  -0.123  -0.090  -0.138  -0.164
58    K         0.037   0.007  -0.010   0.012  -0.042  -0.075  -0.090  -0.138  -0.164
59    I        -1.102  -1.099  -1.079  -1.268  -1.266  -1.228  -0.987  -0.981  -0.946
60    M         0.037   0.007  -0.010   0.115   0.050  -0.000  -0.090  -0.138  -0.164
61    N        -1.102  -1.099  -1.079  -1.001  -0.997  -0.961  -0.987  -0.981  -0.946
62    P        -1.102  -1.099  -1.079  -0.940  -0.924  -0.900  -0.987  -0.981  -0.946
63    L         0.037   0.044   0.000  -0.218  -0.207  -0.264  -0.090  -0.079  -0.148
64    F         0.037   0.007  -0.010  -0.028  -0.088  -0.138  -0.090  -0.138  -0.164
65    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
66    P         0.037   0.044   0.000  -0.139  -0.125  -0.223  -0.090  -0.079  -0.148
67    K         0.037   0.044   0.000   0.059   0.071  -0.003  -0.090  -0.079  -0.148
68    N        -1.102  -1.099  -1.079  -1.122  -1.122  -1.082  -0.987  -0.981  -0.946
69    L        -1.102  -1.099  -1.079  -1.368  -1.360  -1.328  -0.987  -0.981  -0.946
70    L        -1.102  -1.099  -1.079  -1.161  -1.154  -1.121  -0.987  -0.981  -0.946
71    Q        -1.102  -1.099  -1.079  -0.944  -0.941  -0.904  -0.987  -0.981  -0.946
72    L         0.037   0.044   0.000  -0.249  -0.240  -0.299  -0.090  -0.079  -0.148
73    T        -1.102  -1.099  -1.079  -1.078  -1.072  -1.038  -0.987  -0.981  -0.946
74    S        -1.102  -1.099  -1.079  -0.972  -0.950  -0.932  -0.987  -0.981  -0.946
75    I         0.037   0.044   0.000  -0.207  -0.197  -0.289  -0.090  -0.079  -0.148
76    G         0.037   0.044   0.000   0.233   0.248   0.181  -0.090  -0.079  -0.148
77    E        -1.102  -1.099  -1.079  -1.132  -1.130  -1.092  -0.987  -0.981  -0.946
78    I         1.606   1.609   1.630   1.534   1.536   1.571   1.703   1.707   1.732
79    K        -1.102  -1.099  -1.079  -1.197  -1.196  -1.156  -0.987  -0.981  -0.946
80    T        -1.102  -1.099  -1.079  -0.875  -0.864  -0.835  -0.987  -0.981  -0.946
81    T         0.037   0.044   0.000  -0.105  -0.092  -0.177  -0.090  -0.079  -0.148
82    L         1.606   1.609   1.630   1.315   1.319   1.352   1.703   1.707   1.732
83    T        -0.103  -0.101  -0.080  -0.293  -0.291  -0.254  -0.314  -0.311  -0.276
84    V        -0.103  -0.101  -0.080  -0.185  -0.182  -0.146  -0.314  -0.311  -0.276
85    K        -0.103  -0.101  -0.080  -0.218  -0.215  -0.179  -0.314  -0.311  -0.276
86    S        -0.103  -0.101  -0.080  -0.353  -0.350  -0.314  -0.314  -0.311  -0.276
87    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
88    S        -0.103  -0.101  -0.080  -0.319  -0.316  -0.279  -0.314  -0.311  -0.276
89    L         1.606   1.609   1.630   1.320   1.326   1.358   1.703   1.707   1.732
90    P        -0.103  -0.101  -0.080  -0.144  -0.141  -0.105  -0.314  -0.311  -0.276
91    Q        -0.103  -0.101  -0.080  -0.168  -0.165  -0.129  -0.314  -0.311  -0.276
92    S        -0.103  -0.101  -0.080  -0.136  -0.133  -0.097  -0.314  -0.311  -0.276
93    S         0.037   0.044   0.000  -0.142  -0.127  -0.203  -0.090  -0.079  -0.148
94    G        -1.102  -1.099  -1.079  -0.830  -0.825  -0.790  -0.987  -0.981  -0.946
95    K        -1.102  -1.099  -1.079  -0.944  -0.931  -0.904  -0.987  -0.981  -0.946
96    H         0.037   0.007  -0.010   0.315   0.260   0.226  -0.090  -0.138  -0.164
97    S        -1.102  -1.099  -1.079  -1.237  -1.227  -1.197  -0.987  -0.981  -0.946
98    W         1.606   1.609   1.630   1.918   1.924   1.955   1.703   1.707   1.732
99    N        -1.102  -1.099  -1.079  -1.039  -1.038  -0.999  -0.987  -0.981  -0.946
100   Y        -1.102  -1.099  -1.079  -0.972  -0.976  -0.932  -0.987  -0.981  -0.946
101   D        -1.102  -1.099  -1.079  -0.825  -0.811  -0.785  -0.987  -0.981  -0.946
102   E         0.037   0.007  -0.010  -0.010  -0.059  -0.087  -0.090  -0.138  -0.164
103   N         0.037   0.007  -0.010   0.066   0.012  -0.019  -0.090  -0.138  -0.164
104   F         0.037   0.007  -0.010   0.126   0.076   0.044  -0.090  -0.138  -0.164
105   P         1.606   1.609   1.630   1.605   1.611   1.642   1.703   1.707   1.732
106   N         0.037   0.007  -0.010   0.129   0.082   0.056  -0.090  -0.138  -0.164
107   E         0.037   0.007  -0.010   0.098   0.056   0.039  -0.090  -0.138  -0.164
108   V         0.037   0.007  -0.010   0.154   0.106   0.089  -0.090  -0.138  -0.164
109   D         0.037   0.044   0.000   0.041   0.053  -0.027  -0.090  -0.079  -0.148
110   P         0.037   0.007  -0.010  -0.024  -0.078  -0.109  -0.090  -0.138  -0.164
111   D        -1.102  -1.099  -1.079  -1.268  -1.265  -1.228  -0.987  -0.981  -0.946
112   Q         0.037   0.007  -0.010   0.126   0.072   0.036  -0.090  -0.138  -0.164
113   K        -1.102  -1.099  -1.079  -0.857  -0.842  -0.817  -0.987  -0.981  -0.946
114   N        -1.102  -1.099  -1.079  -0.912  -0.900  -0.872  -0.987  -0.981  -0.946
115   D        -0.103  -0.101  -0.080  -0.267  -0.264  -0.228  -0.314  -0.311  -0.276
116   T        -0.103  -0.101  -0.080  -0.173  -0.170  -0.134  -0.314  -0.311  -0.276
117   A        -0.103  -0.101  -0.080  -0.165  -0.162  -0.125  -0.314  -0.311  -0.276
118   D        -1.102  -1.099  -1.079  -1.112  -1.111  -1.072  -0.987  -0.981  -0.946
119   E         0.037   0.044   0.000   0.044   0.056  -0.009  -0.090  -0.079  -0.148
120   T        -1.102  -1.099  -1.079  -0.875  -0.865  -0.835  -0.987  -0.981  -0.946
121   V        -0.103  -0.101  -0.080  -0.201  -0.198  -0.162  -0.314  -0.311  -0.276
122   Y         0.037   0.069   0.008   0.209   0.261   0.169  -0.090  -0.039  -0.135
123   G        -1.102  -1.099  -1.079  -1.073  -1.067  -1.033  -0.987  -0.981  -0.946
124   F        -1.102  -1.099  -1.079  -1.263  -1.263  -1.223  -0.987  -0.981  -0.946
125   S        -1.102  -1.099  -1.079  -0.834  -0.814  -0.794  -0.987  -0.981  -0.946
126   F         0.037   0.007  -0.010   0.209   0.167   0.142  -0.090  -0.138  -0.164
127   P         0.037   0.007  -0.010   0.030  -0.019  -0.045  -0.090  -0.138  -0.164
128   I         0.037   0.007  -0.010  -0.207  -0.271  -0.310  -0.090  -0.138  -0.164
129   Y         0.037   0.007  -0.010   0.352   0.305   0.284  -0.090  -0.138  -0.164
130   S        -1.102  -1.099  -1.079  -1.202  -1.178  -1.162  -0.987  -0.981  -0.946
131   F         0.037   0.069   0.008  -0.218  -0.171  -0.252  -0.090  -0.039  -0.135
132   G         0.037   0.069   0.008   0.037   0.088  -0.004  -0.090  -0.039  -0.135
133   K         0.037   0.069   0.008   0.069   0.123   0.020  -0.090  -0.039  -0.135
134   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
135   T         1.606   1.609   1.630   1.565   1.569   1.603   1.703   1.707   1.732
136   L         1.606   1.609   1.630   1.315   1.319   1.352   1.703   1.707   1.732
137   L        -1.102  -1.099  -1.079  -1.181  -1.175  -1.141  -0.987  -0.981  -0.946
138   F        -1.102  -1.099  -1.079  -0.857  -0.845  -0.817  -0.987  -0.981  -0.946
139   S         0.037   0.007  -0.010  -0.165  -0.214  -0.247  -0.090  -0.138  -0.164
140   M         0.037   0.069   0.008   0.055   0.098   0.023  -0.090  -0.039  -0.135
141   E         0.037   0.069   0.008   0.041   0.096  -0.012  -0.090  -0.039  -0.135
142   E         1.606   1.609   1.630   1.581   1.587   1.619   1.703   1.707   1.732
143   N         1.606   1.609   1.630   1.683   1.688   1.720   1.703   1.707   1.732
144   F         0.037   0.007  -0.010   0.091   0.040   0.002  -0.090  -0.138  -0.164
145   I        -1.102  -1.099  -1.079  -1.305  -1.298  -1.265  -0.987  -0.981  -0.946
146   S        -1.102  -1.099  -1.079  -1.197  -1.184  -1.156  -0.987  -0.981  -0.946
147   I        -1.102  -1.099  -1.079  -0.972  -0.961  -0.932  -0.987  -0.981  -0.946
148   S         0.037   0.007  -0.010  -0.131  -0.176  -0.207  -0.090  -0.138  -0.164
149   P         0.037   0.007  -0.010   0.108   0.066   0.046  -0.090  -0.138  -0.164
150   I         1.606   1.609   1.630   1.534   1.536   1.571   1.703   1.707   1.732
151   F         0.037   0.007  -0.010   0.126   0.076   0.044  -0.090  -0.138  -0.164
152   G         0.037   0.069   0.008   0.023   0.072  -0.018  -0.090  -0.039  -0.135
153   N         0.037   0.044   0.000   0.178   0.189   0.128  -0.090  -0.079  -0.148
154   M        -1.102  -1.099  -1.079  -0.785  -0.782  -0.745  -0.987  -0.981  -0.946
155   I         0.037   0.007  -0.010   0.055   0.011  -0.002  -0.090  -0.138  -0.164
156   S         0.037   0.007  -0.010  -0.150  -0.198  -0.229  -0.090  -0.138  -0.164
157   R         1.606   1.609   1.630   1.909   1.916   1.946   1.703   1.707   1.732
158   S        -1.102  -1.099  -1.079  -1.107  -1.093  -1.067  -0.987  -0.981  -0.946
159   I        -0.103  -0.101  -0.080  -0.185  -0.182  -0.146  -0.314  -0.311  -0.276
160   I         0.037   0.007  -0.010  -0.207  -0.271  -0.310  -0.090  -0.138  -0.164
161   S         0.037   0.007  -0.010  -0.013  -0.050  -0.069  -0.090  -0.138  -0.164
162   Q         0.037   0.044   0.000   0.154   0.167   0.087  -0.090  -0.079  -0.148
163   L         0.037   0.044   0.000  -0.256  -0.246  -0.307  -0.090  -0.079  -0.148
164   A         0.037   0.069   0.008  -0.154  -0.111  -0.180  -0.090  -0.039  -0.135
165   Q        -1.102  -1.099  -1.079  -0.807  -0.798  -0.767  -0.987  -0.981  -0.946
166   F        -1.102  -1.099  -1.079  -0.839  -0.834  -0.799  -0.987  -0.981  -0.946
167   S        -1.102  -1.099  -1.079  -1.151  -1.143  -1.111  -0.987  -0.981  -0.946
168   P        -1.102  -1.099  -1.079  -0.893  -0.889  -0.853  -0.987  -0.981  -0.946
169   D         0.037   0.044   0.000   0.041   0.053  -0.027  -0.090  -0.079  -0.148
170   I         1.606   1.609   1.630   1.534   1.536   1.571   1.703   1.707   1.732
171   I        -1.102  -1.099  -1.079  -1.146  -1.146  -1.106  -0.987  -0.981  -0.946
172   V         0.037   0.069   0.008  -0.046   0.001  -0.091  -0.090  -0.039  -0.135
173   I         0.037   0.069   0.008  -0.311  -0.261  -0.356  -0.090  -0.039  -0.135
174   G         0.037   0.007  -0.010   0.147   0.096   0.064  -0.090  -0.138  -0.164
175   T        -1.102  -1.099  -1.079  -0.912  -0.905  -0.872  -0.987  -0.981  -0.946
176   S         1.606   1.609   1.630   1.470   1.480   1.507   1.703   1.707   1.732
177   D         1.606   1.609   1.630   1.667   1.673   1.705   1.703   1.707   1.732
178   K         0.037   0.044   0.000   0.154   0.165   0.106  -0.090  -0.079  -0.148
179   I         1.606   1.609   1.630   1.534   1.536   1.571   1.703   1.707   1.732
180   A        -1.102  -1.099  -1.079  -0.996  -1.000  -0.956  -0.987  -0.981  -0.946
181   S        -1.102  -1.099  -1.079  -1.171  -1.160  -1.131  -0.987  -0.981  -0.946
182   M        -1.102  -1.099  -1.079  -1.141  -1.158  -1.101  -0.987  -0.981  -0.946
183   K         1.606   1.609   1.630   1.644   1.650   1.681   1.703   1.707   1.732
184   V        -1.102  -1.099  -1.079  -1.025  -1.018  -0.985  -0.987  -0.981  -0.946
185   M        -1.102  -1.099  -1.079  -0.940  -0.954  -0.900  -0.987  -0.981  -0.946
186   T         0.037   0.007  -0.010  -0.105  -0.160  -0.196  -0.090  -0.138  -0.164
187   E        -0.103  -0.101  -0.080  -0.210  -0.207  -0.170  -0.314  -0.311  -0.276
188   N         1.606   1.609   1.630   1.691   1.697   1.728   1.703   1.707   1.732
189   E        -0.103  -0.101  -0.080  -0.210  -0.207  -0.170  -0.314  -0.311  -0.276
190   C         1.606   1.609   1.630   1.879   1.885   1.916   1.703   1.707   1.732
191   T        -1.102  -1.099  -1.079  -1.068  -1.051  -1.028  -0.987  -0.981  -0.946
192   L         1.606   1.609   1.630   1.315   1.319   1.352   1.703   1.707   1.732
193   Q         0.037   0.069   0.008   0.115   0.163   0.073  -0.090  -0.039  -0.135
194   P         1.606   1.609   1.630   1.605   1.611   1.642   1.703   1.707   1.732
195   P         1.606   1.609   1.630   1.605   1.611   1.642   1.703   1.707   1.732
196   E         1.606   1.609   1.630   1.581   1.587   1.619   1.703   1.707   1.732
197   F         1.606   1.609   1.630   1.721   1.731   1.759   1.703   1.707   1.732
198   I         0.037   0.044   0.000  -0.046  -0.039  -0.104  -0.090  -0.079  -0.148
199   T         1.606   1.609   1.630   1.565   1.569   1.603   1.703   1.707   1.732
200   G         1.606   1.609   1.630   1.744   1.753   1.782   1.703   1.707   1.732
201   F         0.037   0.007  -0.010   0.041  -0.012  -0.057  -0.090  -0.138  -0.164
202   I         0.037   0.044   0.000  -0.207  -0.197  -0.289  -0.090  -0.079  -0.148
203   G         0.037   0.007  -0.010   0.105   0.052   0.014  -0.090  -0.138  -0.164
204   S         0.037   0.007  -0.010  -0.094  -0.137  -0.163  -0.090  -0.138  -0.164
205   V        -1.102  -1.099  -1.079  -1.181  -1.172  -1.141  -0.987  -0.981  -0.946
206   L        -1.102  -1.099  -1.079  -1.161  -1.154  -1.121  -0.987  -0.981  -0.946
207   T        -1.102  -1.099  -1.079  -1.412  -1.415  -1.371  -0.987  -0.981  -0.946
208   Q        -1.102  -1.099  -1.079  -0.830  -0.819  -0.790  -0.987  -0.981  -0.946
209   L         1.606   1.609   1.630   1.315   1.319   1.352   1.703   1.707   1.732
210   I        -0.103  -0.101  -0.080  -0.276  -0.274  -0.237  -0.314  -0.311  -0.276
211   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
212   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
213   P         0.037   0.044   0.000   0.012   0.024  -0.050  -0.090  -0.079  -0.148
214   S        -1.102  -1.099  -1.079  -1.049  -1.028  -1.009  -0.987  -0.981  -0.946
215   K         0.037   0.044   0.000   0.066   0.077   0.005  -0.090  -0.079  -0.148
216   G        -1.102  -1.099  -1.079  -1.001  -0.999  -0.961  -0.987  -0.981  -0.946
217   L         0.037   0.044   0.000  -0.199  -0.189  -0.242  -0.090  -0.079  -0.148
218   K        -0.103  -0.101  -0.080  -0.431  -0.429  -0.392  -0.314  -0.311  -0.276
219   F         1.606   1.609   1.630   1.657   1.663   1.695   1.703   1.707   1.732
220   K         0.037   0.044   0.000   0.012   0.024  -0.056  -0.090  -0.079  -0.148
221   C        -1.102  -1.099  -1.079  -0.758  -0.761  -0.719  -0.987  -0.981  -0.946
222   L        -1.102  -1.099  -1.079  -1.176  -1.168  -1.136  -0.987  -0.981  -0.946
223   V         0.037   0.044   0.000   0.012   0.020  -0.059  -0.090  -0.079  -0.148
224   A        -1.102  -1.099  -1.079  -0.857  -0.857  -0.817  -0.987  -0.981  -0.946
225   P         1.606   1.609   1.630   1.605   1.611   1.642   1.703   1.707   1.732
226   S         1.606   1.609   1.630   1.470   1.480   1.507   1.703   1.707   1.732
227   E         1.606   1.609   1.630   1.581   1.587   1.619   1.703   1.707   1.732
228   G         1.606   1.609   1.630   1.744   1.753   1.782   1.703   1.707   1.732
229   P         1.606   1.609   1.630   1.605   1.611   1.642   1.703   1.707   1.732
230   N        -1.102  -1.099  -1.079  -1.010  -1.013  -0.970  -0.987  -0.981  -0.946
231   G         1.606   1.609   1.630   1.744   1.753   1.782   1.703   1.707   1.732
232   F         1.606   1.609   1.630   1.721   1.731   1.759   1.703   1.707   1.732
233   E         1.606   1.609   1.630   1.581   1.587   1.619   1.703   1.707   1.732
234   K         1.606   1.609   1.630   1.644   1.650   1.681   1.703   1.707   1.732
235   L         0.037   0.007  -0.010  -0.157  -0.198  -0.206  -0.090  -0.138  -0.164
236   S         0.037   0.007  -0.010  -0.094  -0.137  -0.163  -0.090  -0.138  -0.164
237   L        -1.102  -1.099  -1.079  -1.305  -1.279  -1.265  -0.987  -0.981  -0.946
238   S        -1.102  -1.099  -1.079  -1.222  -1.210  -1.182  -0.987  -0.981  -0.946
239   D         0.037   0.069   0.008  -0.013   0.037  -0.059  -0.090  -0.039  -0.135
240   M         0.037   0.069   0.008   0.168   0.212   0.131  -0.090  -0.039  -0.135
241   G         0.037   0.069   0.008   0.115   0.168   0.071  -0.090  -0.039  -0.135
242   S         0.037   0.007  -0.010  -0.013  -0.050  -0.069  -0.090  -0.138  -0.164
243   L         0.037   0.044   0.000  -0.311  -0.302  -0.370  -0.090  -0.079  -0.148
244   V         0.037   0.044   0.000   0.012   0.020  -0.059  -0.090  -0.079  -0.148
245   D         1.606   1.609   1.630   1.667   1.673   1.705   1.703   1.707   1.732
246   L        -1.102  -1.099  -1.079  -1.232  -1.217  -1.192  -0.987  -0.981  -0.946
247   C         0.037   0.007  -0.010   0.372   0.326   0.299  -0.090  -0.138  -0.164
248   G         0.037   0.069   0.008  -0.065  -0.011  -0.102  -0.090  -0.039  -0.135
249   Q         0.037   0.007  -0.010   0.154   0.102   0.069  -0.090  -0.138  -0.164
250   W         0.037   0.069   0.008  -0.120  -0.080  -0.143  -0.090  -0.039  -0.135
251   L         0.037   0.044   0.000  -0.249  -0.240  -0.299  -0.090  -0.079  -0.148
252   G        -1.102  -1.099  -1.079  -0.930  -0.913  -0.890  -0.987  -0.981  -0.946
253   F        -1.102  -1.099  -1.079  -1.146  -1.146  -1.106  -0.987  -0.981  -0.946
254   E        -1.102  -1.099  -1.079  -0.940  -0.926  -0.900  -0.987  -0.981  -0.946
255   P         0.037   0.044   0.000   0.012   0.024  -0.050  -0.090  -0.079  -0.148
256   S         1.606   1.609   1.630   1.470   1.480   1.507   1.703   1.707   1.732
257   R         0.037   0.007  -0.010   0.308   0.258   0.227  -0.090  -0.138  -0.164
258   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
259   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
260   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
261   Y         1.606   1.609   1.630   1.843   1.848   1.880   1.703   1.707   1.732
262   S        -1.102  -1.099  -1.079  -1.186  -1.175  -1.146  -0.987  -0.981  -0.946
263   E         0.037   0.007  -0.010  -0.090  -0.144  -0.182  -0.090  -0.138  -0.164
264   E         1.606   1.609   1.630   1.581   1.587   1.619   1.703   1.707   1.732
265   C         1.606   1.609   1.630   1.888   1.895   1.926   1.703   1.707   1.732
266   Y         0.037   0.007  -0.010   0.087   0.020  -0.028  -0.090  -0.138  -0.164
267   R         0.037   0.069   0.008   0.154   0.201   0.118  -0.090  -0.039  -0.135
268   L         0.037   0.044   0.000  -0.142  -0.134  -0.177  -0.090  -0.079  -0.148
269   W         1.606   1.609   1.630   1.918   1.924   1.955   1.703   1.707   1.732
270   R         0.037   0.069   0.008   0.154   0.201   0.118  -0.090  -0.039  -0.135
271   C        -1.102  -1.099  -1.079  -0.940  -0.955  -0.900  -0.987  -0.981  -0.946
272   D         0.037   0.044   0.000   0.087   0.099   0.026  -0.090  -0.079  -0.148
273   S        -1.102  -1.099  -1.079  -1.053  -1.043  -1.013  -0.987  -0.981  -0.946
274   A        -1.102  -1.099  -1.079  -0.866  -0.853  -0.826  -0.987  -0.981  -0.946
275   A        -1.102  -1.099  -1.079  -1.063  -1.064  -1.023  -0.987  -0.981  -0.946
276   I        -1.102  -1.099  -1.079  -1.132  -1.130  -1.092  -0.987  -0.981  -0.946
277   G         1.606   1.609   1.630   1.702   1.708   1.740   1.703   1.707   1.732
278   A         0.037   0.007  -0.010   0.202   0.146   0.107  -0.090  -0.138  -0.164
279   Q         1.606   1.609   1.630   1.760   1.767   1.797   1.703   1.707   1.732
280   S         0.037   0.007  -0.010  -0.065  -0.104  -0.129  -0.090  -0.138  -0.164
281   G         1.606   1.609   1.630   1.744   1.753   1.782   1.703   1.707   1.732
282   L         1.606   1.609   1.630   1.315   1.319   1.352   1.703   1.707   1.732
283   Y         1.606   1.609   1.630   1.843   1.848   1.880   1.703   1.707   1.732
284   I         0.037   0.044   0.000  -0.207  -0.197  -0.289  -0.090  -0.079  -0.148
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q05778
Output conservation file - output/Q05778
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
