1     M         1.877   1.926   2.019   2.137   2.217   2.365   2.105   2.180   2.345
2     T        -1.148  -1.103  -1.069  -1.269  -1.198  -1.144  -1.011  -0.955  -0.887
3     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     P        -0.097  -0.021  -0.040  -0.377  -0.275  -0.289  -0.350  -0.253  -0.268
5     K        -0.097  -0.049  -0.050  -0.257  -0.202  -0.180  -0.350  -0.302  -0.286
6     -        -0.153  -0.177  -0.106  -0.331  -0.378  -0.268  -0.406  -0.444  -0.355
7     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     R         0.011   0.067   0.019  -0.063   0.037  -0.027  -0.191  -0.099  -0.178
9     A         0.544   0.590   0.674   0.113   0.187   0.301   0.137   0.209   0.317
10    L         1.877   1.926   2.019   1.844   1.909   2.067   2.105   2.180   2.345
11    I        -0.083  -0.155  -0.044  -0.243  -0.338  -0.175  -0.355  -0.426  -0.281
12    S        -0.083  -0.065  -0.039  -0.432  -0.404  -0.352  -0.355  -0.324  -0.275
13    L        -0.616  -0.542  -0.587  -0.739  -0.605  -0.663  -0.683  -0.576  -0.615
14    T         0.544   0.610   0.686   0.298   0.407   0.516   0.137   0.250   0.343
15    S         0.322   0.369   0.137   0.492   0.555   0.241   0.301   0.372   0.013
16    Y         1.877   1.926   2.019   2.050   2.124   2.276   2.105   2.180   2.345
17    H        -0.229  -0.221  -0.128  -0.176  -0.148  -0.025  -0.519  -0.509  -0.388
18    G         0.011   0.024  -0.022  -0.170  -0.185  -0.231  -0.191  -0.202  -0.246
19    P        -0.375  -0.435  -0.526  -0.192  -0.314  -0.460  -0.355  -0.434  -0.534
20    F         1.076   0.934   0.917   1.170   0.974   0.931   1.121   0.868   0.803
21    Y         1.076   0.934   0.917   1.312   1.108   1.060   1.121   0.868   0.803
22    K        -0.616  -0.658  -0.609  -0.633  -0.703  -0.634  -0.683  -0.724  -0.645
23    D         1.076   0.934   0.917   1.131   0.940   0.904   1.121   0.868   0.803
24    G         1.877   1.926   2.019   1.782   1.850   2.005   2.105   2.180   2.345
25    A        -0.375  -0.303  -0.486  -0.303  -0.202  -0.470  -0.355  -0.255  -0.485
26    K        -0.083  -0.158  -0.056  -0.253  -0.339  -0.192  -0.355  -0.430  -0.296
27    T         1.877   1.926   2.019   1.914   1.986   2.139   2.105   2.180   2.345
28    G         1.877   1.926   2.019   1.782   1.850   2.005   2.105   2.180   2.345
29    V         0.322   0.205   0.101   0.399   0.251   0.079   0.301   0.120  -0.043
30    F        -0.229  -0.201  -0.113  -0.233  -0.183  -0.054  -0.519  -0.482  -0.367
31    V         0.011  -0.078  -0.015  -0.093  -0.224  -0.160  -0.191  -0.301  -0.229
32    V        -1.148  -1.096  -1.078  -1.281  -1.201  -1.183  -1.011  -0.950  -0.894
33    E         1.877   1.926   2.019   1.944   2.014   2.169   2.105   2.180   2.345
34    I        -0.616  -0.690  -0.624  -0.774  -0.877  -0.785  -0.683  -0.751  -0.660
35    L         0.322   0.197   0.099   0.427   0.234   0.106   0.301   0.109  -0.046
36    R         0.011   0.091   0.033   0.231   0.380   0.286  -0.191  -0.059  -0.153
37    S         1.076   1.100   0.948   1.238   1.271   1.056   1.121   1.156   0.861
38    F         0.544   0.586   0.675   0.432   0.511   0.627   0.137   0.201   0.319
39    D        -1.535  -1.418  -1.429  -1.273  -1.104  -1.111  -1.175  -1.055  -1.031
40    T         0.322   0.343   0.136   0.340   0.372   0.036   0.301   0.334   0.011
41    F         1.076   0.934   0.917   1.170   0.974   0.931   1.121   0.868   0.803
42    E        -1.002  -1.042  -1.031  -0.599  -0.663  -0.660  -0.847  -0.884  -0.844
43    K        -1.002  -1.039  -1.037  -1.029  -1.101  -1.114  -0.847  -0.880  -0.850
44    H         0.322   0.398   0.152   0.304   0.415   0.069   0.301   0.412   0.036
45    G         0.322   0.205   0.101   0.391   0.213   0.097   0.301   0.120  -0.043
46    F         0.011  -0.047  -0.006   0.014  -0.064  -0.020  -0.191  -0.252  -0.218
47    E        -0.616  -0.673  -0.607  -0.600  -0.684  -0.595  -0.683  -0.732  -0.642
48    V         0.322   0.249   0.116   0.377   0.252   0.065   0.301   0.180  -0.020
49    D         0.011  -0.095  -0.025   0.128  -0.039   0.031  -0.191  -0.328  -0.248
50    F        -0.616  -0.660  -0.597  -0.675  -0.736  -0.651  -0.683  -0.716  -0.631
51    V         0.011   0.040  -0.010  -0.206  -0.204  -0.269  -0.191  -0.174  -0.227
52    S         1.076   1.129   0.945   1.162   1.230   0.980   1.121   1.203   0.857
53    E         1.076   0.934   0.917   1.224   1.028   1.005   1.121   0.868   0.803
54    T        -1.002  -1.026  -1.036  -0.803  -0.823  -0.857  -0.847  -0.868  -0.849
55    G         1.877   1.926   2.019   1.782   1.850   2.005   2.105   2.180   2.345
56    G        -0.762  -0.692  -0.655  -1.010  -0.925  -0.852  -0.847  -0.768  -0.696
57    F        -1.002  -0.990  -1.044  -0.733  -0.741  -0.777  -0.847  -0.831  -0.857
58    G        -0.616  -0.654  -0.616  -0.793  -0.862  -0.780  -0.683  -0.709  -0.649
59    W        -0.616  -0.683  -0.626  -0.415  -0.498  -0.397  -0.683  -0.746  -0.662
60    D         1.076   0.934   0.917   1.116   0.916   0.873   1.121   0.868   0.803
61    E         0.709   0.739   0.742   0.585   0.631   0.607   0.465   0.504   0.457
62    H         0.322   0.197   0.099   0.668   0.484   0.305   0.301   0.109  -0.046
63    Y         1.076   1.100   0.948   1.187   1.219   1.030   1.121   1.156   0.861
64    L        -0.762  -0.795  -0.664  -0.923  -0.976  -0.782  -0.847  -0.862  -0.705
65    P        -1.921  -1.887  -1.795  -1.876  -1.788  -1.694  -1.339  -1.297  -1.179
66    K        -0.762  -0.732  -0.659  -0.906  -0.861  -0.759  -0.847  -0.805  -0.701
67    S        -1.002  -1.039  -1.040  -0.913  -1.011  -1.000  -0.847  -0.880  -0.853
68    F        -0.616  -0.525  -0.582  -0.808  -0.667  -0.753  -0.683  -0.570  -0.611
69    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
70    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
71    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
72    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
73    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
74    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
75    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
76    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
77    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
78    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
79    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
80    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
81    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
82    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
83    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
84    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
85    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
86    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
87    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
88    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
89    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
90    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
91    I         0.183   0.155   0.037   0.293   0.259   0.093   0.096   0.055  -0.140
92    G        -0.097  -0.076  -0.061  -0.311  -0.284  -0.252  -0.350  -0.325  -0.298
93    G        -0.718  -0.694  -0.649  -0.948  -0.918  -0.843  -0.797  -0.761  -0.687
94    E        -1.148  -1.056  -1.074  -1.261  -1.128  -1.171  -1.011  -0.914  -0.891
95    D         0.544   0.560   0.662   0.304   0.311   0.466   0.137   0.146   0.292
96    K        -0.616  -0.660  -0.607  -0.549  -0.617  -0.510  -0.683  -0.715  -0.639
97    M        -1.535  -1.522  -1.460  -1.215  -1.155  -1.095  -1.175  -1.152  -1.056
98    N        -1.002  -0.911  -1.009  -0.986  -0.832  -1.017  -0.847  -0.735  -0.822
99    F         0.011  -0.089  -0.028  -0.071  -0.221  -0.158  -0.191  -0.318  -0.251
100   E        -1.148  -1.152  -1.077  -0.974  -0.944  -0.840  -1.011  -1.002  -0.894
101   T         0.322   0.417   0.161   0.497   0.645   0.249   0.301   0.439   0.050
102   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
103   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
104   K         0.322   0.415   0.157   0.357   0.492   0.108   0.301   0.439   0.042
105   N        -0.083  -0.159  -0.042  -0.233  -0.327  -0.160  -0.355  -0.432  -0.278
106   S        -0.616  -0.637  -0.614  -0.655  -0.683  -0.645  -0.683  -0.695  -0.649
107   A        -1.535  -1.544  -1.456  -1.385  -1.408  -1.279  -1.175  -1.169  -1.052
108   F         1.076   0.934   0.917   1.182   0.993   0.954   1.121   0.868   0.803
109   N        -0.616  -0.683  -0.626  -0.406  -0.527  -0.459  -0.683  -0.746  -0.662
110   K        -1.535  -1.491  -1.456  -1.352  -1.287  -1.219  -1.175  -1.127  -1.053
111   A        -1.002  -1.026  -1.036  -0.934  -0.982  -0.955  -0.847  -0.868  -0.849
112   L        -0.375  -0.473  -0.538  -0.314  -0.475  -0.593  -0.355  -0.479  -0.550
113   A        -1.148  -1.148  -1.081  -1.218  -1.211  -1.088  -1.011  -0.999  -0.898
114   R        -1.535  -1.534  -1.462  -1.247  -1.205  -1.135  -1.175  -1.161  -1.058
115   I        -1.535  -1.515  -1.452  -1.330  -1.317  -1.216  -1.175  -1.146  -1.049
116   K         0.322   0.197   0.099   0.407   0.245   0.101   0.301   0.109  -0.046
117   T        -0.229  -0.193  -0.120  -0.439  -0.378  -0.283  -0.519  -0.470  -0.377
118   A         1.076   0.934   0.917   0.982   0.776   0.745   1.121   0.868   0.803
119   N        -0.083  -0.065  -0.032  -0.263  -0.232  -0.167  -0.355  -0.324  -0.266
120   E        -0.229  -0.142  -0.101  -0.473  -0.312  -0.287  -0.519  -0.392  -0.348
121   V        -0.616  -0.623  -0.597  -0.688  -0.692  -0.660  -0.683  -0.676  -0.627
122   N         0.011   0.045  -0.008  -0.052  -0.021  -0.116  -0.191  -0.164  -0.225
123   A        -0.616  -0.543  -0.578  -0.713  -0.617  -0.651  -0.683  -0.586  -0.610
124   S        -0.616  -0.620  -0.607  -0.716  -0.715  -0.699  -0.683  -0.685  -0.643
125   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
126   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
127   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
128   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
129   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
130   D        -0.375  -0.428  -0.522  -0.273  -0.354  -0.512  -0.355  -0.426  -0.530
131   Y         1.076   1.181   0.957   1.332   1.485   1.167   1.121   1.286   0.878
132   K        -1.535  -1.525  -1.451  -1.352  -1.369  -1.222  -1.175  -1.155  -1.049
133   I         0.322   0.267   0.117   0.483   0.381   0.130   0.301   0.205  -0.018
134   F        -0.616  -0.536  -0.599  -0.549  -0.444  -0.508  -0.683  -0.604  -0.635
135   F         1.877   1.926   2.019   1.911   1.992   2.136   2.105   2.180   2.345
136   A        -1.148  -1.074  -1.072  -1.265  -1.134  -1.158  -1.011  -0.928  -0.890
137   S         0.011  -0.078  -0.015  -0.203  -0.329  -0.236  -0.191  -0.301  -0.229
138   A         0.709   0.769   0.768   0.425   0.518   0.477   0.465   0.563   0.511
139   G         1.877   1.926   2.019   1.782   1.850   2.005   2.105   2.180   2.345
140   H         1.877   1.926   2.019   2.125   2.200   2.352   2.105   2.180   2.345
141   G         0.544   0.610   0.686   0.081   0.198   0.299   0.137   0.250   0.343
142   A        -0.083  -0.159  -0.044  -0.340  -0.430  -0.255  -0.355  -0.432  -0.281
143   L        -0.083  -0.053  -0.041  -0.089  -0.033  -0.003  -0.355  -0.312  -0.277
144   F         0.322   0.197   0.099   0.540   0.382   0.250   0.301   0.109  -0.046
145   D         1.877   1.926   2.019   1.861   1.938   2.085   2.105   2.180   2.345
146   Y        -0.229  -0.189  -0.114  -0.391  -0.330  -0.221  -0.519  -0.460  -0.367
147   P         0.322   0.197   0.099   0.544   0.337   0.210   0.301   0.109  -0.046
148   K        -1.002  -1.008  -1.024  -0.892  -0.912  -0.917  -0.847  -0.850  -0.837
149   A         1.076   0.934   0.917   0.990   0.788   0.761   1.121   0.868   0.803
150   K        -0.616  -0.683  -0.626  -0.675  -0.783  -0.691  -0.683  -0.746  -0.662
151   N        -0.375  -0.435  -0.526  -0.211  -0.300  -0.478  -0.355  -0.434  -0.534
152   L         1.076   0.934   0.917   1.111   0.903   0.880   1.121   0.868   0.803
153   Q         1.076   1.120   0.947   1.354   1.421   1.147   1.121   1.188   0.859
154   D        -1.002  -1.007  -1.028  -0.965  -0.944  -1.016  -0.847  -0.849  -0.841
155   I         0.011   0.126   0.031  -0.087   0.080  -0.061  -0.191  -0.031  -0.159
156   A         0.322   0.205   0.101   0.268   0.100  -0.074   0.301   0.120  -0.043
157   S        -0.762  -0.711  -0.659  -0.684  -0.613  -0.510  -0.847  -0.788  -0.701
158   K        -1.002  -0.905  -0.999  -0.804  -0.663  -0.812  -0.847  -0.729  -0.811
159   I        -0.083  -0.158  -0.041  -0.238  -0.325  -0.159  -0.355  -0.431  -0.277
160   Y         0.322   0.267   0.117   0.672   0.614   0.389   0.301   0.205  -0.018
161   A        -1.148  -1.086  -1.071  -1.267  -1.165  -1.141  -1.011  -0.941  -0.888
162   N        -0.375  -0.390  -0.508  -0.257  -0.303  -0.515  -0.355  -0.380  -0.512
163   G         0.709   0.780   0.743   0.513   0.625   0.542   0.465   0.584   0.460
164   G         1.076   0.934   0.917   1.035   0.826   0.791   1.121   0.868   0.803
165   V         0.322   0.197   0.099   0.391   0.206   0.062   0.301   0.109  -0.046
166   I        -0.083  -0.059  -0.030  -0.321  -0.284  -0.219  -0.355  -0.314  -0.263
167   A         0.709   0.826   0.765   0.433   0.617   0.496   0.465   0.671   0.503
168   A         1.877   1.926   2.019   1.723   1.793   1.946   2.105   2.180   2.345
169   I         1.076   1.100   0.948   1.102   1.141   0.934   1.121   1.156   0.861
170   C         1.877   1.926   2.019   2.182   2.261   2.410   2.105   2.180   2.345
171   H         1.877   1.926   2.019   2.125   2.200   2.352   2.105   2.180   2.345
172   G         1.877   1.926   2.019   1.782   1.850   2.005   2.105   2.180   2.345
173   P         1.877   1.926   2.019   1.971   2.038   2.196   2.105   2.180   2.345
174   L        -0.616  -0.555  -0.584  -0.863  -0.759  -0.807  -0.683  -0.591  -0.611
175   L        -0.616  -0.644  -0.598  -0.636  -0.710  -0.599  -0.683  -0.705  -0.631
176   F         0.544   0.586   0.675   0.252   0.315   0.447   0.137   0.201   0.319
177   D        -1.535  -1.525  -1.462  -1.455  -1.455  -1.375  -1.175  -1.155  -1.057
178   G         0.011   0.058   0.012  -0.028   0.067  -0.046  -0.191  -0.113  -0.189
179   L        -0.083  -0.048  -0.044  -0.280  -0.235  -0.180  -0.355  -0.306  -0.281
180   I        -0.375  -0.262  -0.476  -0.309  -0.136  -0.462  -0.355  -0.203  -0.471
181   D        -1.002  -1.026  -1.036  -0.889  -0.943  -0.949  -0.847  -0.868  -0.849
182   I        -1.002  -1.049  -1.033  -0.731  -0.824  -0.781  -0.847  -0.891  -0.846
183   K        -0.616  -0.567  -0.600  -0.687  -0.640  -0.643  -0.683  -0.635  -0.637
184   T         0.563   0.583   0.672   0.357   0.376   0.508   0.177   0.193   0.314
185   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
186   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
187   T         0.322   0.351   0.138   0.336   0.376   0.059   0.301   0.346   0.014
188   R        -1.148  -1.159  -1.076  -1.067  -1.091  -0.965  -1.011  -1.008  -0.894
189   P        -0.616  -0.629  -0.614  -0.532  -0.535  -0.512  -0.683  -0.689  -0.649
190   L         0.011   0.114   0.021  -0.124   0.048  -0.101  -0.191  -0.028  -0.172
191   I        -0.083  -0.158  -0.056  -0.255  -0.353  -0.205  -0.355  -0.430  -0.296
192   E        -1.148  -1.122  -1.083  -0.914  -0.887  -0.796  -1.011  -0.969  -0.898
193   G         1.076   1.202   0.960   1.090   1.250   0.962   1.121   1.320   0.885
194   K         1.076   0.934   0.917   1.113   0.935   0.921   1.121   0.868   0.803
195   A        -1.002  -0.930  -1.003  -0.962  -0.860  -0.974  -0.847  -0.757  -0.815
196   I         0.544   0.586   0.675   0.274   0.338   0.471   0.137   0.201   0.319
197   T         1.877   1.926   2.019   1.914   1.986   2.139   2.105   2.180   2.345
198   G         0.544   0.610   0.686   0.081   0.198   0.299   0.137   0.250   0.343
199   F         1.877   1.926   2.019   1.911   1.992   2.136   2.105   2.180   2.345
200   P        -1.148  -1.122  -1.083  -1.011  -0.960  -0.899  -1.011  -0.969  -0.898
201   L        -1.535  -1.522  -1.460  -1.418  -1.385  -1.307  -1.175  -1.152  -1.056
202   E        -1.921  -1.887  -1.795  -1.750  -1.688  -1.565  -1.339  -1.297  -1.179
203   G         0.322   0.205   0.101   0.308   0.132  -0.051   0.301   0.120  -0.043
204   E         1.877   1.926   2.019   1.944   2.014   2.169   2.105   2.180   2.345
205   I        -1.002  -0.896  -0.996  -0.896  -0.726  -0.896  -0.847  -0.720  -0.808
206   A        -1.535  -1.534  -1.462  -1.507  -1.464  -1.399  -1.175  -1.161  -1.058
207   L        -0.616  -0.678  -0.613  -0.508  -0.623  -0.532  -0.683  -0.740  -0.647
208   G         1.076   1.129   0.945   1.035   1.110   0.839   1.121   1.203   0.857
209   V         0.544   0.558   0.661   0.189   0.192   0.354   0.137   0.144   0.289
210   D        -0.762  -0.709  -0.661  -0.757  -0.692  -0.610  -0.847  -0.785  -0.703
211   D        -0.616  -0.654  -0.606  -0.689  -0.762  -0.682  -0.683  -0.719  -0.641
212   I        -0.616  -0.629  -0.614  -0.694  -0.720  -0.710  -0.683  -0.689  -0.649
213   L         0.709   0.678   0.717   0.644   0.591   0.652   0.465   0.386   0.405
214   R         0.011  -0.078  -0.015  -0.019  -0.138  -0.036  -0.191  -0.301  -0.233
215   S        -1.002  -1.055  -1.032  -0.889  -0.972  -0.924  -0.847  -0.896  -0.845
216   R        -0.375  -0.428  -0.519  -0.030  -0.130  -0.288  -0.355  -0.426  -0.526
217   K        -1.002  -1.042  -1.031  -0.922  -1.003  -1.020  -0.847  -0.884  -0.844
218   L         0.011  -0.038  -0.003   0.016  -0.052   0.008  -0.191  -0.238  -0.209
219   T        -1.921  -1.887  -1.795  -1.704  -1.660  -1.519  -1.339  -1.297  -1.179
220   T        -1.002  -0.990  -1.044  -0.940  -0.946  -1.054  -0.847  -0.831  -0.857
221   V         0.011   0.054  -0.001  -0.087  -0.020  -0.117  -0.191  -0.120  -0.210
222   E        -1.148  -1.122  -1.083  -1.092  -1.049  -0.983  -1.011  -0.969  -0.898
223   R        -1.148  -1.103  -1.074  -0.912  -0.850  -0.804  -1.011  -0.955  -0.892
224   V        -1.148  -1.159  -1.086  -1.138  -1.180  -1.039  -1.011  -1.008  -0.901
225   A        -0.616  -0.654  -0.616  -0.836  -0.897  -0.842  -0.683  -0.709  -0.649
226   N        -1.148  -1.139  -1.075  -1.173  -1.177  -1.050  -1.011  -0.991  -0.893
227   K        -1.148  -1.180  -1.100  -1.166  -1.207  -1.091  -1.011  -1.024  -0.914
228   N        -0.616  -0.625  -0.617  -0.784  -0.791  -0.769  -0.683  -0.690  -0.655
229   R         1.076   1.100   0.948   1.089   1.127   0.943   1.121   1.156   0.861
230   A         1.877   1.926   2.019   1.723   1.793   1.946   2.105   2.180   2.345
231   K        -0.718  -0.692  -0.643  -0.791  -0.749  -0.683  -0.797  -0.757  -0.682
232   Y         0.544   0.586   0.675   0.401   0.475   0.600   0.137   0.201   0.319
233   L        -1.002  -1.055  -1.032  -0.776  -0.861  -0.841  -0.847  -0.896  -0.845
234   A        -0.762  -0.701  -0.659  -1.065  -0.982  -0.906  -0.847  -0.776  -0.700
235   P         0.322   0.205   0.101   0.486   0.283   0.111   0.301   0.120  -0.043
236   I         0.011  -0.020  -0.023   0.049  -0.019  -0.014  -0.191  -0.246  -0.245
237   H        -1.535  -1.534  -1.462  -1.278  -1.232  -1.170  -1.175  -1.161  -1.058
238   P         1.877   1.926   2.019   1.971   2.038   2.196   2.105   2.180   2.345
239   W        -0.375  -0.222  -0.489   0.111   0.341  -0.067  -0.355  -0.151  -0.488
240   D        -1.535  -1.515  -1.466  -1.666  -1.666  -1.602  -1.175  -1.146  -1.061
241   D         0.011  -0.038  -0.004  -0.055  -0.102  -0.078  -0.191  -0.238  -0.214
242   Y         0.322   0.180   0.103   0.477   0.270   0.146   0.301   0.086  -0.040
243   S        -0.229  -0.233  -0.128  -0.474  -0.508  -0.345  -0.519  -0.525  -0.388
244   I        -0.762  -0.730  -0.659  -0.771  -0.745  -0.634  -0.847  -0.801  -0.700
245   T        -1.148  -1.086  -1.075  -1.224  -1.143  -1.123  -1.011  -0.941  -0.892
246   D         1.877   1.926   2.019   1.861   1.938   2.085   2.105   2.180   2.345
247   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
248   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
249   G         1.076   1.120   0.947   1.088   1.150   0.939   1.121   1.188   0.859
250   K         0.709   0.780   0.747   0.781   0.902   0.788   0.465   0.583   0.468
251   L         0.544   0.558   0.661   0.321   0.316   0.472   0.137   0.142   0.289
252   V         1.076   0.934   0.917   1.102   0.910   0.885   1.121   0.868   0.803
253   T         1.877   1.926   2.019   1.914   1.986   2.139   2.105   2.180   2.345
254   G         1.877   1.926   2.019   1.782   1.850   2.005   2.105   2.180   2.345
255   V        -0.375  -0.473  -0.538  -0.309  -0.444  -0.569  -0.355  -0.479  -0.550
256   N         1.877   1.926   2.019   1.951   2.034   2.176   2.105   2.180   2.345
257   A         1.076   1.100   0.948   1.211   1.244   1.006   1.121   1.156   0.861
258   N        -0.616  -0.520  -0.573  -0.594  -0.473  -0.501  -0.683  -0.552  -0.602
259   S         1.877   1.926   2.019   1.891   1.953   2.115   2.105   2.180   2.345
260   S         1.076   1.100   0.948   0.990   1.026   0.811   1.121   1.156   0.861
261   Y        -0.616  -0.560  -0.597  -0.699  -0.611  -0.659  -0.683  -0.611  -0.632
262   S         0.322   0.249   0.116   0.401   0.265   0.052   0.301   0.180  -0.020
263   T         1.076   0.934   0.917   1.170   0.963   0.926   1.121   0.868   0.803
264   T         0.322   0.180   0.103   0.255   0.030  -0.095   0.301   0.086  -0.040
265   I         0.011   0.045  -0.003   0.002   0.051  -0.038  -0.191  -0.145  -0.214
266   R        -1.002  -0.944  -1.025  -1.015  -0.921  -1.045  -0.847  -0.772  -0.838
267   A         0.322   0.249   0.116   0.276   0.170  -0.036   0.301   0.180  -0.020
268   I         0.011   0.006  -0.017  -0.031  -0.062  -0.117  -0.191  -0.211  -0.238
269   N        -1.535  -1.457  -1.440  -1.452  -1.325  -1.310  -1.175  -1.091  -1.039
270   A        -0.616  -0.677  -0.608  -0.870  -0.964  -0.858  -0.683  -0.738  -0.642
271   L        -1.264  -1.233  -1.135  -1.227  -1.171  -1.037  -1.109  -1.066  -0.944
272   Y        -1.264  -1.233  -1.135  -1.110  -1.073  -0.919  -1.109  -1.066  -0.944
273   -        -0.829  -0.803  -0.698  -0.965  -0.956  -0.772  -0.908  -0.870  -0.739
274   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
275   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
276   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
277   S        -0.616  -0.590  -0.599  -0.669  -0.639  -0.639  -0.683  -0.656  -0.634
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q04902
Output conservation file - output/Q04902
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
