1     M         1.887   1.895   1.933   2.126   2.145   2.204   2.050   2.061   2.117
2     L        -0.435  -0.382  -0.442  -0.568  -0.466  -0.587  -0.488  -0.415  -0.488
3     R        -0.435  -0.398  -0.445  -0.547  -0.493  -0.567  -0.488  -0.437  -0.492
4     I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
9     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
10    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
11    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
12    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
13    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
14    T        -0.435  -0.442  -0.454  -0.356  -0.367  -0.375  -0.488  -0.496  -0.503
15    V        -1.209  -1.203  -1.179  -1.067  -1.046  -1.014  -0.995  -0.985  -0.944
16    K        -0.435  -0.398  -0.445  -0.413  -0.343  -0.440  -0.488  -0.437  -0.492
17    T        -1.209  -1.203  -1.179  -0.965  -0.950  -0.911  -0.995  -0.985  -0.944
18    L         1.887   1.895   1.933   1.680   1.698   1.754   2.050   2.061   2.117
19    Q        -1.209  -1.203  -1.179  -1.189  -1.175  -1.138  -0.995  -0.985  -0.944
20    Q        -1.209  -1.203  -1.179  -1.080  -1.068  -1.027  -0.995  -0.985  -0.944
21    R        -1.209  -1.203  -1.179  -1.252  -1.236  -1.200  -0.995  -0.985  -0.944
22    A        -1.209  -1.203  -1.179  -0.978  -0.973  -0.924  -0.995  -0.985  -0.944
23    S        -1.209  -1.203  -1.179  -1.366  -1.345  -1.316  -0.995  -0.985  -0.944
24    F        -0.435  -0.459  -0.462  -0.381  -0.435  -0.431  -0.488  -0.518  -0.513
25    H        -0.435  -0.459  -0.462  -0.189  -0.217  -0.216  -0.488  -0.518  -0.513
26    H        -0.567  -0.564  -0.533  -0.461  -0.454  -0.404  -0.657  -0.650  -0.604
27    S        -0.567  -0.564  -0.533  -0.697  -0.686  -0.641  -0.657  -0.650  -0.604
28    F        -0.567  -0.564  -0.533  -0.491  -0.483  -0.434  -0.657  -0.650  -0.604
29    K        -0.567  -0.564  -0.533  -0.548  -0.535  -0.491  -0.657  -0.650  -0.604
30    H        -0.567  -0.564  -0.533  -0.491  -0.485  -0.434  -0.657  -0.650  -0.604
31    I        -0.567  -0.564  -0.533  -0.689  -0.684  -0.633  -0.657  -0.650  -0.604
32    S         0.465   0.469   0.448   0.266   0.268   0.223   0.245   0.251   0.205
33    V         1.887   1.895   1.933   1.933   1.946   2.009   2.050   2.061   2.117
34    P         0.465   0.469   0.448   0.323   0.328   0.266   0.245   0.251   0.205
35    D         0.465   0.469   0.448   0.432   0.438   0.401   0.245   0.251   0.205
36    L        -0.567  -0.564  -0.533  -0.766  -0.757  -0.711  -0.657  -0.650  -0.604
37    H        -0.567  -0.564  -0.533  -0.602  -0.598  -0.546  -0.657  -0.650  -0.604
38    T        -0.567  -0.564  -0.533  -0.795  -0.794  -0.740  -0.657  -0.650  -0.604
39    R         0.465   0.454   0.445   0.458   0.440   0.407   0.245   0.225   0.198
40    A        -0.567  -0.564  -0.533  -0.606  -0.598  -0.550  -0.657  -0.650  -0.604
41    Q        -0.567  -0.564  -0.533  -0.661  -0.664  -0.605  -0.657  -0.650  -0.604
42    N        -1.209  -1.203  -1.179  -1.195  -1.182  -1.143  -0.995  -0.985  -0.944
43    D        -0.435  -0.398  -0.445  -0.436  -0.379  -0.445  -0.488  -0.437  -0.492
44    Q        -0.435  -0.382  -0.442  -0.294  -0.219  -0.295  -0.488  -0.415  -0.488
45    T        -1.209  -1.203  -1.179  -0.835  -0.819  -0.780  -0.995  -0.985  -0.944
46    N        -0.435  -0.473  -0.466  -0.464  -0.526  -0.514  -0.488  -0.535  -0.518
47    C         1.887   1.895   1.933   2.164   2.179   2.242   2.050   2.061   2.117
48    Y        -0.435  -0.473  -0.466  -0.280  -0.348  -0.331  -0.488  -0.535  -0.518
49    C         0.631   0.637   0.557   0.901   0.910   0.777   0.527   0.537   0.395
50    Q        -0.567  -0.564  -0.533  -0.579  -0.579  -0.522  -0.657  -0.650  -0.604
51    E        -0.435  -0.473  -0.466  -0.383  -0.449  -0.431  -0.488  -0.535  -0.518
52    I        -0.435  -0.417  -0.448  -0.603  -0.578  -0.634  -0.488  -0.461  -0.496
53    N         0.631   0.567   0.544   0.552   0.449   0.390   0.527   0.420   0.373
54    A        -0.435  -0.398  -0.445  -0.411  -0.342  -0.422  -0.488  -0.437  -0.492
55    R        -0.435  -0.442  -0.454  -0.497  -0.520  -0.516  -0.488  -0.496  -0.503
56    L         1.887   1.895   1.933   1.680   1.698   1.754   2.050   2.061   2.117
57    P         0.631   0.661   0.565   0.732   0.776   0.634   0.527   0.576   0.408
58    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
59    K        -0.435  -0.442  -0.454  -0.508  -0.522  -0.547  -0.488  -0.496  -0.503
60    T        -0.435  -0.398  -0.445  -0.432  -0.378  -0.449  -0.488  -0.437  -0.492
61    D        -1.209  -1.203  -1.179  -1.234  -1.233  -1.183  -0.995  -0.985  -0.944
62    P        -0.435  -0.417  -0.448  -0.369  -0.338  -0.389  -0.488  -0.461  -0.496
63    L         0.339   0.345   0.378  -0.071  -0.056  -0.006   0.020   0.030   0.078
64    D         1.887   1.895   1.933   1.908   1.918   1.983   2.050   2.061   2.117
65    P        -0.435  -0.473  -0.466  -0.394  -0.458  -0.447  -0.488  -0.535  -0.518
66    H        -1.209  -1.203  -1.179  -1.118  -1.104  -1.066  -0.995  -0.985  -0.944
67    I        -0.435  -0.473  -0.466  -0.660  -0.739  -0.732  -0.488  -0.535  -0.518
68    K        -1.209  -1.203  -1.179  -1.186  -1.156  -1.135  -0.995  -0.985  -0.944
69    L         1.887   1.895   1.933   1.680   1.698   1.754   2.050   2.061   2.117
70    P        -0.435  -0.459  -0.462  -0.469  -0.513  -0.525  -0.488  -0.518  -0.513
71    H        -1.209  -1.203  -1.179  -1.056  -1.045  -1.003  -0.995  -0.985  -0.944
72    R        -1.209  -1.203  -1.179  -1.043  -1.026  -0.990  -0.995  -0.985  -0.944
73    T        -0.435  -0.442  -0.454  -0.398  -0.413  -0.423  -0.488  -0.496  -0.503
74    P         0.631   0.567   0.544   0.697   0.590   0.555   0.527   0.420   0.373
75    N        -1.209  -1.203  -1.179  -1.217  -1.203  -1.166  -0.995  -0.985  -0.944
76    Y         0.631   0.567   0.544   0.800   0.698   0.661   0.527   0.420   0.373
77    N        -1.209  -1.203  -1.179  -0.972  -0.940  -0.919  -0.995  -0.985  -0.944
78    K         1.887   1.895   1.933   1.767   1.774   1.842   2.050   2.061   2.117
79    H         1.887   1.895   1.933   2.001   2.018   2.077   2.050   2.061   2.117
80    V         0.631   0.567   0.544   0.572   0.453   0.410   0.527   0.420   0.373
81    L         0.631   0.661   0.565   0.513   0.560   0.431   0.527   0.576   0.408
82    L        -0.435  -0.473  -0.466  -0.536  -0.590  -0.562  -0.488  -0.535  -0.518
83    L         0.631   0.661   0.565   0.413   0.462   0.305   0.527   0.576   0.408
84    S         1.887   1.895   1.933   1.878   1.908   1.953   2.050   2.061   2.117
85    P        -0.567  -0.561  -0.533  -0.551  -0.538  -0.494  -0.657  -0.647  -0.604
86    G         0.465   0.489   0.461   0.308   0.346   0.288   0.245   0.285   0.227
87    D        -0.567  -0.561  -0.533  -0.616  -0.601  -0.560  -0.657  -0.647  -0.604
88    R         0.465   0.432   0.445   0.438   0.375   0.388   0.245   0.186   0.198
89    F        -0.567  -0.561  -0.533  -0.551  -0.537  -0.494  -0.657  -0.647  -0.604
90    A         0.465   0.489   0.461   0.552   0.593   0.549   0.245   0.285   0.227
91    Q        -0.567  -0.561  -0.533  -0.475  -0.470  -0.418  -0.657  -0.647  -0.604
92    P        -0.435  -0.442  -0.454  -0.525  -0.547  -0.547  -0.488  -0.496  -0.503
93    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
94    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
95    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
96    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
97    W         1.887   1.895   1.933   2.177   2.193   2.254   2.050   2.061   2.117
98    K         1.887   1.895   1.933   1.791   1.803   1.866   2.050   2.061   2.117
99    V         0.465   0.489   0.456   0.344   0.388   0.325   0.245   0.285   0.218
100   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
101   W         1.887   1.895   1.933   2.174   2.189   2.251   2.050   2.061   2.117
102   N        -0.435  -0.382  -0.442  -0.400  -0.312  -0.413  -0.488  -0.415  -0.488
103   H         0.631   0.689   0.572   0.661   0.762   0.575   0.527   0.621   0.420
104   N        -0.435  -0.382  -0.442  -0.521  -0.443  -0.526  -0.488  -0.415  -0.488
105   L         0.631   0.661   0.565   0.413   0.462   0.305   0.527   0.576   0.408
106   D         0.631   0.689   0.572   0.678   0.762   0.584   0.527   0.621   0.420
107   T        -1.209  -1.203  -1.179  -1.093  -1.089  -1.041  -0.995  -0.985  -0.944
108   N         0.465   0.454   0.445   0.368   0.356   0.333   0.245   0.225   0.198
109   T         0.465   0.454   0.445   0.547   0.533   0.505   0.245   0.225   0.198
110   N        -0.567  -0.564  -0.533  -0.567  -0.551  -0.511  -0.657  -0.650  -0.604
111   R        -1.209  -1.203  -1.179  -1.088  -1.095  -1.036  -0.995  -0.985  -0.944
112   P         1.887   1.895   1.933   1.952   1.964   2.028   2.050   2.061   2.117
113   Y        -0.435  -0.473  -0.466  -0.290  -0.359  -0.343  -0.488  -0.535  -0.518
114   N        -0.435  -0.382  -0.442  -0.473  -0.370  -0.485  -0.488  -0.415  -0.488
115   A        -1.209  -1.203  -1.179  -1.142  -1.145  -1.090  -0.995  -0.985  -0.944
116   I        -0.435  -0.473  -0.466  -0.443  -0.497  -0.482  -0.488  -0.535  -0.518
117   S        -0.435  -0.473  -0.466  -0.484  -0.534  -0.537  -0.488  -0.535  -0.518
118   K        -0.435  -0.473  -0.466  -0.484  -0.544  -0.518  -0.488  -0.535  -0.518
119   L         0.631   0.567   0.544   0.513   0.432   0.401   0.527   0.420   0.373
120   R        -1.209  -1.203  -1.179  -1.186  -1.182  -1.135  -0.995  -0.985  -0.944
121   S         0.465   0.438   0.448   0.278   0.231   0.222   0.245   0.196   0.205
122   H        -0.567  -0.562  -0.533  -0.764  -0.758  -0.709  -0.657  -0.648  -0.604
123   L         0.465   0.438   0.448   0.065   0.011   0.023   0.245   0.196   0.205
124   G        -0.567  -0.562  -0.533  -0.691  -0.680  -0.636  -0.657  -0.648  -0.604
125   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
126   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
127   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
128   G        -1.209  -1.203  -1.179  -1.131  -1.130  -1.079  -0.995  -0.985  -0.944
129   S         0.339   0.344   0.377   0.113   0.130   0.175   0.020   0.028   0.076
130   P         0.631   0.637   0.557   0.693   0.705   0.571   0.527   0.537   0.395
131   G         1.887   1.895   1.933   1.888   1.902   1.964   2.050   2.061   2.117
132   I         0.465   0.489   0.456   0.385   0.426   0.359   0.245   0.285   0.218
133   L         1.887   1.895   1.933   1.652   1.663   1.725   2.050   2.061   2.117
134   I        -1.209  -1.203  -1.179  -1.085  -1.070  -1.033  -0.995  -0.985  -0.944
135   N         0.631   0.567   0.544   0.656   0.567   0.526   0.527   0.420   0.373
136   A        -0.435  -0.473  -0.466  -0.329  -0.394  -0.380  -0.488  -0.535  -0.518
137   V        -0.435  -0.398  -0.445  -0.603  -0.547  -0.628  -0.488  -0.437  -0.492
138   H        -1.209  -1.203  -1.179  -0.949  -0.916  -0.896  -0.995  -0.985  -0.944
139   L         0.339   0.345   0.378  -0.071  -0.056  -0.006   0.020   0.030   0.078
140   Q        -1.209  -1.203  -1.179  -0.985  -0.973  -0.932  -0.995  -0.985  -0.944
141   N        -0.435  -0.417  -0.448  -0.486  -0.444  -0.509  -0.488  -0.461  -0.496
142   E        -1.209  -1.203  -1.179  -1.035  -1.012  -0.982  -0.995  -0.985  -0.944
143   F        -0.567  -0.561  -0.533  -0.793  -0.786  -0.738  -0.657  -0.647  -0.604
144   I        -0.567  -0.561  -0.533  -0.750  -0.746  -0.695  -0.657  -0.647  -0.604
145   P         0.465   0.489   0.461   0.416   0.462   0.403   0.245   0.285   0.227
146   R        -0.567  -0.561  -0.533  -0.583  -0.577  -0.527  -0.657  -0.647  -0.604
147   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
148   K        -1.209  -1.203  -1.179  -1.134  -1.123  -1.082  -0.995  -0.985  -0.944
149   Q        -0.435  -0.398  -0.445  -0.245  -0.173  -0.259  -0.488  -0.437  -0.492
150   H        -0.435  -0.442  -0.454  -0.371  -0.367  -0.390  -0.488  -0.496  -0.503
151   D        -1.209  -1.203  -1.179  -1.280  -1.271  -1.230  -0.995  -0.985  -0.944
152   E        -0.435  -0.473  -0.466  -0.319  -0.375  -0.357  -0.488  -0.535  -0.518
153   W        -1.209  -1.203  -1.179  -0.988  -1.001  -0.935  -0.995  -0.985  -0.944
154   L        -0.435  -0.459  -0.462  -0.561  -0.596  -0.585  -0.488  -0.518  -0.513
155   Y        -0.435  -0.382  -0.442  -0.495  -0.426  -0.497  -0.488  -0.415  -0.488
156   F         0.631   0.567   0.544   0.726   0.621   0.582   0.527   0.420   0.373
157   F        -0.435  -0.442  -0.454  -0.536  -0.539  -0.548  -0.488  -0.496  -0.503
158   V         0.631   0.567   0.544   0.572   0.453   0.410   0.527   0.420   0.373
159   I        -0.435  -0.459  -0.462  -0.344  -0.379  -0.365  -0.488  -0.518  -0.513
160   P         1.887   1.895   1.933   1.952   1.964   2.028   2.050   2.061   2.117
161   D         1.887   1.895   1.933   1.908   1.918   1.983   2.050   2.061   2.117
162   M         0.631   0.567   0.544   0.859   0.760   0.710   0.527   0.420   0.373
163   K         0.631   0.661   0.565   0.559   0.597   0.466   0.527   0.576   0.408
164   L        -1.209  -1.203  -1.179  -1.085  -1.053  -1.033  -0.995  -0.985  -0.944
165   Y         0.631   0.567   0.544   0.763   0.655   0.613   0.527   0.420   0.373
166   V        -0.435  -0.382  -0.442  -0.375  -0.296  -0.383  -0.488  -0.415  -0.488
167   I        -0.435  -0.442  -0.454  -0.445  -0.460  -0.475  -0.488  -0.496  -0.503
168   K        -0.435  -0.473  -0.466  -0.512  -0.577  -0.550  -0.488  -0.535  -0.518
169   E        -1.209  -1.203  -1.179  -1.198  -1.198  -1.146  -0.995  -0.985  -0.944
170   T        -1.209  -1.203  -1.179  -1.126  -1.134  -1.074  -0.995  -0.985  -0.944
171   D         0.631   0.637   0.557   0.694   0.701   0.585   0.527   0.537   0.395
172   I        -0.435  -0.473  -0.466  -0.443  -0.497  -0.482  -0.488  -0.535  -0.518
173   E        -0.435  -0.473  -0.466  -0.488  -0.562  -0.551  -0.488  -0.535  -0.518
174   E        -0.435  -0.382  -0.442  -0.484  -0.402  -0.500  -0.488  -0.415  -0.488
175   F         1.887   1.895   1.933   1.982   1.997   2.058   2.050   2.061   2.117
176   A         0.465   0.469   0.448   0.423   0.429   0.380   0.245   0.251   0.205
177   S        -0.567  -0.564  -0.533  -0.741  -0.742  -0.686  -0.657  -0.650  -0.604
178   F         0.465   0.469   0.448   0.498   0.505   0.470   0.245   0.251   0.205
179   L         0.465   0.469   0.448   0.124   0.128   0.091   0.245   0.251   0.205
180   D        -0.567  -0.564  -0.533  -0.693  -0.685  -0.637  -0.657  -0.650  -0.604
181   E        -0.567  -0.564  -0.533  -0.653  -0.651  -0.597  -0.657  -0.650  -0.604
182   G         1.887   1.895   1.933   1.888   1.902   1.964   2.050   2.061   2.117
183   A        -0.567  -0.564  -0.533  -0.629  -0.628  -0.573  -0.657  -0.650  -0.604
184   I        -0.567  -0.564  -0.533  -0.529  -0.516  -0.472  -0.657  -0.650  -0.604
185   Q        -0.567  -0.564  -0.533  -0.521  -0.519  -0.464  -0.657  -0.650  -0.604
186   A         0.465   0.454   0.445   0.423   0.401   0.372   0.245   0.225   0.198
187   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
188   P         0.465   0.454   0.445   0.385   0.362   0.331   0.245   0.225   0.198
189   K         1.887   1.895   1.933   1.791   1.803   1.866   2.050   2.061   2.117
190   L         1.887   1.895   1.933   1.652   1.663   1.725   2.050   2.061   2.117
191   S         1.887   1.895   1.933   1.837   1.848   1.912   2.050   2.061   2.117
192   F         0.631   0.567   0.544   0.800   0.712   0.680   0.527   0.420   0.373
193   Q        -1.209  -1.203  -1.179  -1.027  -1.003  -0.974  -0.995  -0.985  -0.944
194   D         0.631   0.567   0.544   0.704   0.610   0.577   0.527   0.420   0.373
195   Y         0.631   0.637   0.557   0.810   0.820   0.695   0.527   0.537   0.395
196   L         1.887   1.895   1.933   1.680   1.698   1.754   2.050   2.061   2.117
197   S        -0.435  -0.473  -0.466  -0.525  -0.584  -0.584  -0.488  -0.535  -0.518
198   G         0.631   0.567   0.544   0.650   0.547   0.514   0.527   0.420   0.373
199   K        -0.435  -0.473  -0.466  -0.547  -0.604  -0.590  -0.488  -0.535  -0.518
200   A        -0.435  -0.473  -0.466  -0.348  -0.415  -0.402  -0.488  -0.535  -0.518
201   K        -0.435  -0.442  -0.454  -0.407  -0.419  -0.446  -0.488  -0.496  -0.503
202   A        -0.435  -0.473  -0.466  -0.354  -0.424  -0.409  -0.488  -0.535  -0.518
203   S        -1.209  -1.203  -1.179  -0.985  -0.949  -0.932  -0.995  -0.985  -0.944
204   Q        -0.435  -0.459  -0.462  -0.173  -0.207  -0.214  -0.488  -0.518  -0.513
205   Q        -0.435  -0.417  -0.448  -0.215  -0.178  -0.237  -0.488  -0.461  -0.496
206   V        -1.209  -1.203  -1.179  -1.085  -1.063  -1.033  -0.995  -0.985  -0.944
207   H        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
208   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
209   V        -0.435  -0.417  -0.448  -0.493  -0.467  -0.518  -0.488  -0.461  -0.496
210   H        -0.435  -0.459  -0.462  -0.310  -0.341  -0.353  -0.488  -0.518  -0.513
211   H        -0.435  -0.398  -0.445  -0.434  -0.364  -0.447  -0.488  -0.437  -0.492
212   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
213   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
214   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
215   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
216   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
217   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
218   -        -0.567  -0.563  -0.533  -0.469  -0.455  -0.412  -0.657  -0.650  -0.604
219   -         0.465   0.478   0.464   0.299   0.317   0.290   0.245   0.267   0.232
220   -         0.465   0.478   0.464   0.490   0.527   0.477   0.245   0.267   0.232
221   -        -0.567  -0.563  -0.533  -0.647  -0.627  -0.591  -0.657  -0.650  -0.604
222   -        -0.567  -0.563  -0.533  -0.606  -0.592  -0.550  -0.657  -0.650  -0.604
223   R        -1.209  -1.203  -1.179  -1.315  -1.312  -1.265  -0.995  -0.985  -0.944
224   K        -0.435  -0.417  -0.448  -0.568  -0.539  -0.586  -0.488  -0.461  -0.496
225   L        -1.209  -1.203  -1.179  -1.406  -1.400  -1.356  -0.995  -0.985  -0.944
226   T        -1.209  -1.203  -1.179  -1.107  -1.097  -1.055  -0.995  -0.985  -0.944
227   R        -1.209  -1.203  -1.179  -1.150  -1.143  -1.099  -0.995  -0.985  -0.944
228   F         0.631   0.661   0.565   0.773   0.819   0.677   0.527   0.576   0.408
229   Q        -0.435  -0.459  -0.462  -0.267  -0.322  -0.321  -0.488  -0.518  -0.513
230   G        -1.209  -1.203  -1.179  -1.109  -1.094  -1.057  -0.995  -0.985  -0.944
231   E         0.631   0.567   0.544   0.741   0.646   0.620   0.527   0.420   0.373
232   T        -1.209  -1.203  -1.179  -1.173  -1.159  -1.121  -0.995  -0.985  -0.944
233   F        -0.435  -0.459  -0.462  -0.460  -0.510  -0.520  -0.488  -0.518  -0.513
234   L        -1.209  -1.203  -1.179  -1.257  -1.231  -1.206  -0.995  -0.985  -0.944
235   R        -1.209  -1.203  -1.179  -1.184  -1.184  -1.132  -0.995  -0.985  -0.944
236   D         0.631   0.661   0.565   0.688   0.730   0.590   0.527   0.576   0.408
237   W        -0.435  -0.473  -0.466  -0.327  -0.413  -0.409  -0.488  -0.535  -0.518
238   N        -1.209  -1.203  -1.179  -1.289  -1.272  -1.238  -0.995  -0.985  -0.944
239   L        -0.435  -0.417  -0.448  -0.497  -0.465  -0.498  -0.488  -0.461  -0.496
240   V         1.887   1.895   1.933   1.893   1.899   1.968   2.050   2.061   2.117
241   C         1.887   1.895   1.933   2.164   2.179   2.242   2.050   2.061   2.117
242   G         1.887   1.895   1.933   1.883   1.894   1.958   2.050   2.061   2.117
243   H         1.887   1.895   1.933   2.001   2.018   2.077   2.050   2.061   2.117
244   Y        -0.435  -0.459  -0.462  -0.253  -0.287  -0.295  -0.488  -0.518  -0.513
245   K        -0.435  -0.473  -0.466  -0.565  -0.615  -0.610  -0.488  -0.535  -0.518
246   R         1.887   1.895   1.933   2.016   2.030   2.092   2.050   2.061   2.117
247   D         1.887   1.895   1.933   1.908   1.918   1.983   2.050   2.061   2.117
248   A        -0.435  -0.459  -0.462  -0.269  -0.316  -0.306  -0.488  -0.518  -0.513
249   K         0.631   0.689   0.572   0.719   0.812   0.614   0.527   0.621   0.420
250   C         1.887   1.895   1.933   2.164   2.179   2.242   2.050   2.061   2.117
251   G         1.887   1.895   1.933   1.883   1.894   1.958   2.050   2.061   2.117
252   E        -0.435  -0.459  -0.462  -0.508  -0.567  -0.566  -0.488  -0.518  -0.513
253   M        -0.435  -0.473  -0.466  -0.369  -0.443  -0.449  -0.488  -0.535  -0.518
254   G         0.339   0.347   0.379   0.200   0.218   0.268   0.020   0.034   0.079
255   P         1.887   1.895   1.933   1.952   1.964   2.028   2.050   2.061   2.117
256   D        -1.209  -1.203  -1.179  -1.310  -1.309  -1.259  -0.995  -0.985  -0.944
257   I         0.339   0.347   0.379  -0.071  -0.063  -0.012   0.020   0.034   0.079
258   I        -0.435  -0.459  -0.462  -0.603  -0.648  -0.659  -0.488  -0.518  -0.513
259   A        -0.435  -0.459  -0.462  -0.317  -0.360  -0.360  -0.488  -0.518  -0.513
260   A        -1.209  -1.203  -1.179  -1.085  -1.057  -1.033  -0.995  -0.985  -0.944
261   F        -0.435  -0.417  -0.448  -0.471  -0.438  -0.505  -0.488  -0.461  -0.496
262   Q        -0.435  -0.442  -0.454  -0.436  -0.460  -0.463  -0.488  -0.496  -0.503
263   D        -1.209  -1.203  -1.179  -1.167  -1.160  -1.115  -0.995  -0.985  -0.944
264   E        -1.209  -1.203  -1.179  -1.148  -1.136  -1.096  -0.995  -0.985  -0.944
265   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
266   K         0.631   0.661   0.565   0.511   0.553   0.406   0.527   0.576   0.408
267   L        -0.567  -0.561  -0.533  -0.745  -0.717  -0.691  -0.657  -0.647  -0.604
268   F        -0.567  -0.561  -0.533  -0.628  -0.616  -0.572  -0.657  -0.647  -0.604
269   P         0.631   0.567   0.544   0.694   0.588   0.550   0.527   0.420   0.373
270   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
271   E        -1.209  -1.203  -1.179  -1.167  -1.162  -1.115  -0.995  -0.985  -0.944
272   N        -0.435  -0.473  -0.466  -0.568  -0.630  -0.632  -0.488  -0.535  -0.518
273   N        -0.435  -0.473  -0.466  -0.523  -0.586  -0.581  -0.488  -0.535  -0.518
274   L        -0.435  -0.442  -0.454  -0.415  -0.418  -0.463  -0.488  -0.496  -0.503
275   A         0.631   0.689   0.572   0.664   0.747   0.577   0.527   0.621   0.420
276   L        -0.435  -0.442  -0.454  -0.603  -0.616  -0.644  -0.488  -0.496  -0.503
277   I         0.339   0.347   0.379   0.087   0.095   0.154   0.020   0.034   0.079
278   S         1.887   1.895   1.933   1.878   1.908   1.953   2.050   2.061   2.117
279   H         1.887   1.895   1.933   2.001   2.018   2.077   2.050   2.061   2.117
280   I         0.631   0.637   0.557   0.611   0.617   0.501   0.527   0.537   0.395
281   G         1.887   1.895   1.933   1.883   1.894   1.958   2.050   2.061   2.117
282   G         1.887   1.895   1.933   1.883   1.894   1.958   2.050   2.061   2.117
283   H         1.887   1.895   1.933   2.001   2.018   2.077   2.050   2.061   2.117
284   I        -0.435  -0.442  -0.454  -0.547  -0.559  -0.572  -0.488  -0.496  -0.503
285   F         0.631   0.567   0.544   0.773   0.678   0.644   0.527   0.420   0.373
286   A         1.887   1.895   1.933   1.996   2.012   2.072   2.050   2.061   2.117
287   G         1.887   1.895   1.933   1.883   1.894   1.958   2.050   2.061   2.117
288   N         1.887   1.895   1.933   1.873   1.894   1.948   2.050   2.061   2.117
289   V        -0.435  -0.417  -0.448  -0.576  -0.551  -0.611  -0.488  -0.461  -0.496
290   I         0.631   0.661   0.565   0.513   0.560   0.390   0.527   0.576   0.408
291   F        -0.435  -0.382  -0.442  -0.319  -0.230  -0.333  -0.488  -0.415  -0.488
292   Y         0.631   0.567   0.544   0.810   0.710   0.673   0.527   0.420   0.373
293   K        -0.435  -0.473  -0.466  -0.447  -0.507  -0.476  -0.488  -0.535  -0.518
294   L        -0.435  -0.417  -0.448  -0.576  -0.546  -0.585  -0.488  -0.461  -0.496
295   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
296   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
297   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
298   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
299   F         0.465   0.489   0.456   0.365   0.404   0.347   0.245   0.285   0.218
300   G        -0.567  -0.564  -0.533  -0.582  -0.575  -0.526  -0.657  -0.650  -0.604
301   R         0.465   0.489   0.456   0.382   0.427   0.368   0.245   0.285   0.218
302   E        -0.567  -0.564  -0.533  -0.502  -0.497  -0.445  -0.657  -0.650  -0.604
303   K         0.465   0.489   0.456   0.278   0.325   0.250   0.245   0.285   0.218
304   M        -0.567  -0.564  -0.533  -0.495  -0.493  -0.438  -0.657  -0.650  -0.604
305   Q        -0.567  -0.564  -0.533  -0.398  -0.387  -0.341  -0.657  -0.650  -0.604
306   N        -0.435  -0.398  -0.445  -0.581  -0.526  -0.596  -0.488  -0.437  -0.492
307   K         0.631   0.567   0.544   0.569   0.474   0.446   0.527   0.420   0.373
308   L        -1.209  -1.203  -1.179  -1.415  -1.412  -1.365  -0.995  -0.985  -0.944
309   D         0.631   0.567   0.544   0.614   0.500   0.460   0.527   0.420   0.373
310   S         0.631   0.637   0.557   0.622   0.646   0.502   0.527   0.537   0.395
311   L         0.631   0.567   0.544   0.413   0.313   0.270   0.527   0.420   0.373
312   W         1.887   1.895   1.933   2.174   2.189   2.251   2.050   2.061   2.117
313   F        -0.435  -0.473  -0.466  -0.407  -0.464  -0.467  -0.488  -0.535  -0.518
314   G         0.631   0.637   0.557   0.625   0.638   0.505   0.527   0.537   0.395
315   K         0.631   0.567   0.544   0.559   0.459   0.433   0.527   0.420   0.373
316   V         0.631   0.637   0.557   0.572   0.575   0.434   0.527   0.537   0.395
317   Y        -1.209  -1.203  -1.179  -1.083  -1.068  -1.030  -0.995  -0.985  -0.944
318   P         1.887   1.895   1.933   1.952   1.964   2.028   2.050   2.061   2.117
319   H        -1.209  -1.203  -1.179  -0.944  -0.937  -0.891  -0.995  -0.985  -0.944
320   N         0.631   0.567   0.544   0.580   0.477   0.427   0.527   0.420   0.373
321   L         0.339   0.345   0.378  -0.025  -0.012   0.042   0.020   0.030   0.078
322   K        -1.209  -1.203  -1.179  -1.184  -1.157  -1.132  -0.995  -0.985  -0.944
323   L        -1.209  -1.203  -1.179  -1.237  -1.220  -1.186  -0.995  -0.985  -0.944
324   L        -0.435  -0.398  -0.445  -0.603  -0.540  -0.628  -0.488  -0.437  -0.492
325   C        -0.435  -0.398  -0.445  -0.302  -0.259  -0.305  -0.488  -0.437  -0.492
326   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
327   E        -0.435  -0.417  -0.448  -0.286  -0.261  -0.295  -0.488  -0.461  -0.496
328   N        -1.209  -1.203  -1.179  -1.059  -1.018  -1.006  -0.995  -0.985  -0.944
329   L         0.339   0.345   0.378  -0.025  -0.012   0.042   0.020   0.030   0.078
330   E        -1.209  -1.203  -1.179  -1.200  -1.198  -1.149  -0.995  -0.985  -0.944
331   N        -1.209  -1.203  -1.179  -1.252  -1.246  -1.200  -0.995  -0.985  -0.944
332   G         0.631   0.637   0.557   0.635   0.641   0.517   0.527   0.537   0.395
333   K        -1.209  -1.203  -1.179  -1.301  -1.291  -1.250  -0.995  -0.985  -0.944
334   I         1.887   1.895   1.933   1.833   1.843   1.908   2.050   2.061   2.117
335   I         0.631   0.637   0.557   0.513   0.520   0.376   0.527   0.537   0.395
336   D        -1.209  -1.203  -1.179  -1.107  -1.112  -1.055  -0.995  -0.985  -0.944
337   E        -0.435  -0.417  -0.448  -0.430  -0.401  -0.454  -0.488  -0.461  -0.496
338   M        -1.209  -1.203  -1.179  -1.128  -1.133  -1.077  -0.995  -0.985  -0.944
339   Y         0.631   0.661   0.565   0.810   0.856   0.708   0.527   0.576   0.408
340   R         1.887   1.895   1.933   2.016   2.030   2.092   2.050   2.061   2.117
341   G         1.887   1.895   1.933   1.883   1.894   1.958   2.050   2.061   2.117
342   G        -0.435  -0.473  -0.466  -0.404  -0.469  -0.447  -0.488  -0.535  -0.518
343   I        -1.209  -1.203  -1.179  -1.200  -1.185  -1.149  -0.995  -0.985  -0.944
344   S         1.887   1.895   1.933   1.837   1.848   1.912   2.050   2.061   2.117
345   M        -0.567  -0.564  -0.533  -0.582  -0.576  -0.526  -0.657  -0.650  -0.604
346   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
347   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
348   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
349   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q04689
Output conservation file - output/Q04689
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
