1     M         1.513   1.539   1.623   1.796   1.838   1.964   1.659   1.695   1.834
2     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
3     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
9     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
10    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
11    S         0.723   0.649   0.588   0.656   0.556   0.446   0.671   0.536   0.381
12    S         0.316   0.363   0.457  -0.011   0.079   0.216  -0.083  -0.003   0.121
13    L         0.794   0.847   0.628   0.575   0.656   0.309   0.788   0.868   0.457
14    L        -0.248  -0.261  -0.207  -0.399  -0.375  -0.267  -0.519  -0.523  -0.440
15    I        -1.829  -1.746  -1.685  -1.619  -1.498  -1.426  -1.342  -1.268  -1.160
16    S        -0.688  -0.697  -0.671  -0.702  -0.689  -0.611  -0.786  -0.783  -0.718
17    Y         1.513   1.539   1.623   1.767   1.808   1.936   1.659   1.695   1.834
18    E         1.513   1.539   1.623   1.532   1.563   1.707   1.659   1.695   1.834
19    S        -0.065  -0.190  -0.173  -0.173  -0.358  -0.342  -0.231  -0.402  -0.392
20    D         0.298   0.330   0.440   0.019   0.069   0.245  -0.120  -0.069   0.087
21    F        -0.614  -0.585  -0.654  -0.307  -0.279  -0.392  -0.675  -0.665  -0.696
22    K        -0.614  -0.656  -0.645  -0.682  -0.743  -0.784  -0.675  -0.704  -0.681
23    T        -0.918  -0.763  -0.999  -0.944  -0.737  -1.014  -0.786  -0.607  -0.846
24    T        -0.614  -0.686  -0.651  -0.631  -0.749  -0.711  -0.675  -0.737  -0.688
25    L        -0.803  -0.850  -0.719  -1.192  -1.250  -1.030  -0.897  -0.932  -0.768
26    E        -1.525  -1.444  -1.415  -1.541  -1.409  -1.385  -1.231  -1.150  -1.070
27    Q        -0.384  -0.389  -0.256  -0.644  -0.654  -0.448  -0.675  -0.678  -0.503
28    A        -0.614  -0.656  -0.668  -0.662  -0.773  -0.778  -0.675  -0.733  -0.713
29    K        -0.614  -0.661  -0.677  -0.542  -0.632  -0.654  -0.675  -0.738  -0.723
30    A        -1.525  -1.485  -1.418  -1.499  -1.441  -1.337  -1.231  -1.186  -1.072
31    S        -0.369  -0.229  -0.568  -0.233  -0.011  -0.628  -0.342  -0.162  -0.584
32    L         0.853   0.917   0.668   0.666   0.753   0.414   0.881   0.977   0.531
33    A        -1.411  -1.460  -1.394  -1.273  -1.349  -1.274  -1.120  -1.157  -1.052
34    E        -1.411  -1.395  -1.390  -1.299  -1.280  -1.303  -1.120  -1.099  -1.048
35    A        -0.195  -0.241  -0.176  -0.413  -0.483  -0.407  -0.453  -0.486  -0.397
36    P        -0.369  -0.236  -0.542  -0.228  -0.048  -0.439  -0.342  -0.170  -0.553
37    S        -1.411  -1.474  -1.396  -1.345  -1.435  -1.321  -1.120  -1.168  -1.053
38    Q        -1.204  -1.124  -1.104  -1.443  -1.354  -1.276  -1.099  -1.013  -0.950
39    P        -1.552  -1.547  -1.435  -1.451  -1.459  -1.284  -1.244  -1.229  -1.084
40    L        -0.726  -0.695  -0.675  -0.814  -0.738  -0.744  -0.809  -0.758  -0.716
41    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
42    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
43    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
44    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
45    S        -1.221  -1.175  -1.094  -1.229  -1.184  -1.005  -1.120  -1.069  -0.944
46    Q        -1.221  -1.220  -1.094  -1.124  -1.086  -0.913  -1.120  -1.100  -0.944
47    R         0.223   0.139  -0.044   0.321   0.184  -0.082   0.214   0.088  -0.192
48    N        -0.688  -0.675  -0.669  -0.658  -0.621  -0.629  -0.786  -0.762  -0.717
49    T        -1.525  -1.414  -1.398  -1.543  -1.392  -1.344  -1.231  -1.132  -1.058
50    T        -1.525  -1.485  -1.418  -1.273  -1.231  -1.091  -1.231  -1.186  -1.072
51    L         0.223   0.102  -0.057   0.104  -0.065  -0.274   0.214   0.037  -0.210
52    K        -0.918  -0.967  -1.023  -0.826  -0.918  -1.105  -0.786  -0.840  -0.870
53    H        -1.221  -1.189  -1.099  -1.272  -1.242  -1.057  -1.120  -1.080  -0.947
54    V        -0.614  -0.713  -0.668  -0.474  -0.591  -0.518  -0.675  -0.774  -0.712
55    E         0.527   0.484   0.487   0.446   0.355   0.329   0.325   0.232   0.182
56    Q        -1.107  -0.954  -1.058  -1.098  -0.892  -1.004  -1.009  -0.844  -0.907
57    Q        -1.107  -1.134  -1.077  -1.130  -1.193  -1.091  -1.009  -1.018  -0.925
58    Q        -1.829  -1.706  -1.684  -1.762  -1.626  -1.514  -1.342  -1.233  -1.159
59    D        -0.614  -0.710  -0.678  -0.561  -0.697  -0.643  -0.675  -0.778  -0.723
60    E         1.513   1.539   1.623   1.532   1.563   1.707   1.659   1.695   1.834
61    L        -1.107  -1.069  -1.061  -1.222  -1.154  -1.112  -1.009  -0.959  -0.909
62    F        -1.525  -1.521  -1.404  -1.431  -1.419  -1.225  -1.231  -1.215  -1.063
63    D         0.527   0.625   0.568   0.452   0.604   0.493   0.325   0.494   0.341
64    L        -0.195  -0.196  -0.178  -0.478  -0.472  -0.406  -0.453  -0.449  -0.406
65    L         0.223   0.139  -0.044   0.104  -0.017  -0.256   0.214   0.088  -0.192
66    D         0.853   0.746   0.654   0.990   0.866   0.730   0.881   0.702   0.506
67    Q         1.513   1.539   1.623   1.544   1.590   1.719   1.659   1.695   1.834
68    M         0.853   0.848   0.662   1.160   1.158   0.823   0.881   0.870   0.521
69    D        -1.525  -1.460  -1.401  -1.549  -1.447  -1.351  -1.231  -1.167  -1.060
70    V        -0.614  -0.592  -0.642  -0.556  -0.509  -0.605  -0.675  -0.640  -0.682
71    E         1.513   1.539   1.623   1.532   1.563   1.707   1.659   1.695   1.834
72    V        -0.614  -0.679  -0.674  -0.524  -0.654  -0.697  -0.675  -0.755  -0.720
73    N        -0.688  -0.710  -0.679  -0.711  -0.729  -0.701  -0.786  -0.797  -0.725
74    N         0.853   0.746   0.654   1.094   0.968   0.827   0.881   0.702   0.506
75    S        -1.221  -1.202  -1.106  -1.484  -1.403  -1.245  -1.120  -1.085  -0.952
76    I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
77    G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
78    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
79    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
80    D         0.353   0.418   0.484   0.426   0.559   0.619  -0.008   0.106   0.176
81    A        -0.369  -0.350  -0.571  -0.267  -0.245  -0.543  -0.342  -0.325  -0.588
82    S        -0.614  -0.497  -0.622  -0.665  -0.478  -0.667  -0.675  -0.521  -0.654
83    E        -1.107  -1.142  -1.071  -1.151  -1.223  -1.116  -1.009  -1.032  -0.923
84    R         1.513   1.539   1.623   1.502   1.528   1.678   1.659   1.695   1.834
85    A        -0.614  -0.687  -0.665  -0.633  -0.706  -0.690  -0.675  -0.739  -0.705
86    T        -1.525  -1.553  -1.410  -1.494  -1.572  -1.321  -1.231  -1.236  -1.067
87    Y        -0.369  -0.531  -0.627  -0.026  -0.276  -0.507  -0.342  -0.543  -0.656
88    K        -0.195  -0.168  -0.167  -0.236  -0.164  -0.192  -0.453  -0.399  -0.384
89    A        -0.369  -0.444  -0.593  -0.168  -0.272  -0.489  -0.342  -0.441  -0.616
90    K        -0.065  -0.149  -0.174  -0.027  -0.188  -0.228  -0.231  -0.367  -0.393
91    L         0.353   0.369   0.448  -0.006   0.004   0.092  -0.008   0.009   0.102
92    R         1.513   1.539   1.623   1.502   1.528   1.678   1.659   1.695   1.834
93    E        -1.107  -1.076  -1.059  -1.119  -1.079  -1.060  -1.009  -0.971  -0.910
94    W         0.527   0.625   0.568   0.782   0.929   0.836   0.325   0.494   0.341
95    K         0.298   0.335   0.444   0.039   0.088   0.266  -0.120  -0.059   0.096
96    K        -1.107  -1.025  -1.052  -1.168  -1.049  -1.084  -1.009  -0.914  -0.904
97    T        -1.107  -1.128  -1.068  -1.116  -1.152  -1.078  -1.009  -1.020  -0.920
98    I        -0.803  -0.782  -0.702  -0.864  -0.866  -0.710  -0.897  -0.870  -0.751
99    Q        -0.803  -0.773  -0.710  -0.925  -0.891  -0.776  -0.897  -0.865  -0.760
100   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
101   D        -1.107  -1.078  -1.053  -1.121  -1.067  -1.045  -1.009  -0.960  -0.905
102   I        -1.829  -1.816  -1.697  -1.632  -1.550  -1.444  -1.342  -1.320  -1.168
103   K        -0.065  -0.096  -0.161  -0.035  -0.128  -0.217  -0.231  -0.305  -0.374
104   R        -1.107  -1.025  -1.046  -1.095  -0.978  -0.991  -1.009  -0.913  -0.898
105   P        -1.411  -1.441  -1.413  -0.917  -0.963  -0.996  -1.120  -1.141  -1.067
106   L         0.853   0.917   0.668   0.699   0.783   0.485   0.881   0.977   0.531
107   Q        -0.688  -0.659  -0.656  -0.714  -0.659  -0.643  -0.786  -0.747  -0.703
108   S        -1.411  -1.458  -1.396  -1.232  -1.310  -1.262  -1.120  -1.155  -1.054
109   L         0.223   0.102  -0.057   0.099  -0.073  -0.283   0.214   0.037  -0.210
110   V        -0.726  -0.805  -0.699  -0.966  -1.092  -0.902  -0.809  -0.881  -0.745
111   D        -0.162  -0.277  -0.195  -0.215  -0.371  -0.269  -0.374  -0.523  -0.424
112   S        -1.411  -1.330  -1.371  -1.316  -1.187  -1.293  -1.120  -1.040  -1.033
113   G        -1.221  -1.197  -1.095  -1.263  -1.239  -1.074  -1.120  -1.083  -0.944
114   D         0.853   0.848   0.662   0.962   0.972   0.682   0.881   0.870   0.521
115   R         0.353   0.429   0.471   0.134   0.256   0.314  -0.008   0.127   0.150
116   D        -1.525  -1.517  -1.413  -1.325  -1.316  -1.149  -1.231  -1.211  -1.068
117   R        -0.614  -0.588  -0.651  -0.650  -0.657  -0.722  -0.675  -0.668  -0.693
118   L         1.513   1.539   1.623   1.265   1.304   1.448   1.659   1.695   1.834
119   F         0.853   0.890   0.669   1.151   1.212   0.827   0.881   0.936   0.533
120   G         0.853   0.890   0.669   1.129   1.174   0.850   0.881   0.936   0.533
121   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
122   -        -0.726  -0.716  -0.680  -0.625  -0.608  -0.572  -0.809  -0.792  -0.727
123   -         0.794   0.820   0.653   0.813   0.844   0.599   0.788   0.825   0.505
124   -        -1.073  -1.113  -1.071  -0.779  -0.854  -0.831  -0.954  -0.988  -0.917
125   -        -1.073  -1.113  -1.071  -0.918  -1.004  -0.955  -0.954  -0.988  -0.917
126   -        -0.510  -0.571  -0.623  -0.417  -0.507  -0.640  -0.519  -0.592  -0.652
127   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
128   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
129   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
130   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
131   D        -0.153  -0.124  -0.153  -0.123  -0.075  -0.127  -0.333  -0.293  -0.353
132   L        -1.309  -1.273  -1.134  -1.523  -1.420  -1.262  -1.186  -1.142  -0.975
133   N        -1.223  -1.195  -1.102  -1.239  -1.207  -1.049  -1.107  -1.071  -0.947
134   A        -1.204  -1.155  -1.086  -1.151  -1.103  -0.963  -1.099  -1.045  -0.935
135   S        -0.726  -0.648  -0.668  -0.823  -0.714  -0.732  -0.809  -0.726  -0.712
136   N        -0.162  -0.070  -0.157  -0.137   0.003  -0.120  -0.374  -0.241  -0.368
137   I        -1.073  -1.108  -1.063  -0.964  -1.041  -0.969  -0.954  -0.985  -0.910
138   D        -1.221  -1.202  -1.094  -1.152  -1.107  -0.961  -1.120  -1.088  -0.943
139   D        -1.411  -1.460  -1.394  -1.285  -1.339  -1.301  -1.120  -1.157  -1.052
140   D        -0.195  -0.125  -0.163  -0.382  -0.296  -0.332  -0.453  -0.379  -0.388
141   Q         1.513   1.539   1.623   1.544   1.590   1.719   1.659   1.695   1.834
142   R         1.513   1.539   1.623   1.502   1.528   1.678   1.659   1.695   1.834
143   Q        -0.065  -0.091  -0.126  -0.061  -0.070  -0.151  -0.231  -0.245  -0.318
144   Q         0.853   0.746   0.654   0.939   0.797   0.640   0.881   0.702   0.506
145   L         1.513   1.539   1.623   1.265   1.304   1.448   1.659   1.695   1.834
146   L         1.513   1.539   1.623   1.265   1.304   1.448   1.659   1.695   1.834
147   S         0.223   0.202  -0.033   0.268   0.235  -0.100   0.214   0.172  -0.175
148   N         0.353   0.331   0.438   0.337   0.289   0.453  -0.008  -0.067   0.082
149   H        -0.803  -0.797  -0.724  -0.620  -0.633  -0.541  -0.897  -0.883  -0.772
150   A        -1.107  -1.179  -1.098  -1.165  -1.246  -1.148  -1.009  -1.059  -0.945
151   I        -0.803  -0.775  -0.713  -1.138  -1.109  -1.030  -0.897  -0.863  -0.761
152   L         1.513   1.539   1.623   1.265   1.304   1.448   1.659   1.695   1.834
153   Q        -0.384  -0.377  -0.251  -0.644  -0.634  -0.441  -0.675  -0.661  -0.497
154   K        -0.065  -0.089  -0.114  -0.117  -0.145  -0.195  -0.231  -0.243  -0.299
155   S         0.853   0.960   0.675   0.852   0.997   0.615   0.881   1.043   0.545
156   G        -0.195  -0.200  -0.169  -0.312  -0.312  -0.246  -0.453  -0.437  -0.387
157   D        -0.195  -0.082  -0.157  -0.353  -0.174  -0.272  -0.453  -0.303  -0.369
158   R         0.527   0.586   0.540   0.441   0.524   0.439   0.325   0.423   0.287
159   L         0.853   0.848   0.662   0.666   0.665   0.405   0.881   0.870   0.521
160   K        -1.107  -1.124  -1.055  -1.116  -1.189  -1.039  -1.009  -1.016  -0.908
161   D         0.223   0.062  -0.068   0.367   0.143  -0.096   0.214  -0.018  -0.228
162   A         0.353   0.418   0.484   0.034   0.155   0.240  -0.008   0.106   0.176
163   S        -0.065   0.032  -0.111  -0.129   0.045  -0.204  -0.231  -0.080  -0.295
164   R         0.853   0.804   0.656   0.902   0.828   0.615   0.881   0.798   0.511
165   I        -0.195  -0.195  -0.168  -0.488  -0.492  -0.420  -0.453  -0.447  -0.393
166   A         1.513   1.539   1.623   1.538   1.581   1.713   1.659   1.695   1.834
167   N        -0.918  -0.849  -1.006  -0.706  -0.591  -0.915  -0.786  -0.707  -0.853
168   E         1.513   1.539   1.623   1.532   1.563   1.707   1.659   1.695   1.834
169   T         1.513   1.539   1.623   1.629   1.665   1.802   1.659   1.695   1.834
170   E         1.513   1.539   1.623   1.532   1.563   1.707   1.659   1.695   1.834
171   G        -0.688  -0.719  -0.672  -0.599  -0.640  -0.591  -0.786  -0.802  -0.720
172   I         0.853   0.890   0.669   0.982   1.033   0.742   0.881   0.936   0.533
173   G         1.513   1.539   1.623   1.730   1.762   1.900   1.659   1.695   1.834
174   S        -0.195  -0.075  -0.152  -0.392  -0.200  -0.277  -0.453  -0.290  -0.367
175   Q        -0.384  -0.389  -0.256  -0.605  -0.626  -0.429  -0.675  -0.678  -0.503
176   I         0.853   0.804   0.656   0.969   0.908   0.695   0.881   0.798   0.511
177   M         0.353   0.418   0.484   0.027   0.116   0.237  -0.008   0.106   0.176
178   M        -1.107  -1.179  -1.098  -0.851  -0.979  -0.891  -1.009  -1.059  -0.945
179   D         1.513   1.539   1.623   1.561   1.612   1.736   1.659   1.695   1.834
180   L         1.513   1.539   1.623   1.265   1.304   1.448   1.659   1.695   1.834
181   R         0.527   0.445   0.487   0.521   0.384   0.470   0.325   0.158   0.183
182   S        -0.065  -0.168  -0.174  -0.141  -0.298  -0.298  -0.231  -0.384  -0.394
183   Q         1.513   1.539   1.623   1.544   1.590   1.719   1.659   1.695   1.834
184   R         1.513   1.539   1.623   1.502   1.528   1.678   1.659   1.695   1.834
185   E         0.853   0.746   0.654   0.951   0.808   0.682   0.881   0.702   0.506
186   T        -0.195  -0.200  -0.169  -0.273  -0.257  -0.192  -0.453  -0.437  -0.387
187   L         0.298   0.321   0.436  -0.182  -0.152   0.043  -0.120  -0.086   0.079
188   E        -0.369  -0.267  -0.573  -0.201  -0.072  -0.511  -0.342  -0.212  -0.591
189   N        -0.310  -0.305  -0.228  -0.183  -0.168  -0.056  -0.564  -0.563  -0.464
190   A        -0.195  -0.232  -0.182  -0.415  -0.467  -0.378  -0.453  -0.492  -0.411
191   R         0.223   0.062  -0.068   0.279   0.016  -0.211   0.214  -0.018  -0.228
192   Q        -1.107  -1.146  -1.081  -1.007  -1.063  -0.987  -1.009  -1.032  -0.930
193   T         0.223   0.062  -0.068   0.481   0.264   0.062   0.214  -0.018  -0.228
194   L         1.513   1.539   1.623   1.265   1.304   1.448   1.659   1.695   1.834
195   F        -1.411  -1.441  -1.413  -1.022  -1.085  -1.097  -1.120  -1.141  -1.067
196   Q        -1.107  -1.113  -1.077  -1.025  -1.059  -0.953  -1.009  -1.012  -0.928
197   A         0.223   0.062  -0.068   0.343   0.117  -0.118   0.214  -0.018  -0.228
198   D         0.223   0.062  -0.068   0.350   0.120  -0.131   0.214  -0.018  -0.228
199   S        -0.195  -0.116  -0.160  -0.244  -0.104  -0.147  -0.453  -0.340  -0.374
200   Y         0.853   0.746   0.654   1.211   1.085   0.959   0.881   0.702   0.506
201   V         0.853   0.746   0.654   1.080   0.923   0.731   0.881   0.702   0.506
202   D         1.513   1.539   1.623   1.561   1.612   1.736   1.659   1.695   1.834
203   K         0.353   0.339   0.441   0.175   0.125   0.272  -0.008  -0.050   0.088
204   S         1.513   1.539   1.623   1.438   1.486   1.617   1.659   1.695   1.834
205   I        -0.065  -0.164  -0.161  -0.079  -0.249  -0.272  -0.231  -0.361  -0.374
206   K        -0.195  -0.160  -0.167  -0.326  -0.299  -0.282  -0.453  -0.419  -0.393
207   T         1.513   1.539   1.623   1.629   1.665   1.802   1.659   1.695   1.834
208   L         1.513   1.539   1.623   1.265   1.304   1.448   1.659   1.695   1.834
209   K         0.853   0.848   0.662   1.013   1.022   0.724   0.881   0.870   0.521
210   T        -0.614  -0.591  -0.639  -0.530  -0.488  -0.559  -0.675  -0.638  -0.678
211   M         1.513   1.539   1.623   1.796   1.838   1.964   1.659   1.695   1.834
212   T        -0.803  -0.759  -0.710  -0.901  -0.848  -0.757  -0.897  -0.849  -0.760
213   R         1.513   1.539   1.623   1.502   1.528   1.678   1.659   1.695   1.834
214   R         1.513   1.539   1.623   1.502   1.528   1.678   1.659   1.695   1.834
215   L         0.527   0.495   0.498   0.273   0.228   0.254   0.325   0.255   0.204
216   V        -0.803  -0.681  -0.697  -0.869  -0.695  -0.689  -0.897  -0.754  -0.742
217   A        -0.065  -0.168  -0.174   0.002  -0.143  -0.140  -0.231  -0.384  -0.394
218   N         1.513   1.539   1.623   1.667   1.716   1.839   1.659   1.695   1.834
219   K         0.527   0.445   0.487   0.516   0.357   0.382   0.325   0.158   0.183
220   F        -0.369  -0.391  -0.579   0.042   0.014  -0.313  -0.342  -0.368  -0.599
221   I         0.223   0.102  -0.057   0.360   0.196  -0.082   0.214   0.037  -0.210
222   S         0.353   0.331   0.438   0.084   0.044   0.218  -0.008  -0.067   0.082
223   Y         0.223   0.062  -0.068   0.590   0.361   0.126   0.214  -0.018  -0.228
224   A         0.223   0.257  -0.031   0.333   0.376  -0.074   0.214   0.261  -0.172
225   I         1.513   1.539   1.623   1.555   1.593   1.730   1.659   1.695   1.834
226   I         1.513   1.539   1.623   1.555   1.593   1.730   1.659   1.695   1.834
227   A         0.853   0.804   0.656   0.951   0.896   0.678   0.881   0.798   0.511
228   V         0.853   0.746   0.654   1.118   0.977   0.818   0.881   0.702   0.506
229   L         1.513   1.539   1.623   1.265   1.304   1.448   1.659   1.695   1.834
230   I         0.353   0.331   0.438   0.234   0.191   0.363  -0.008  -0.067   0.082
231   L         0.527   0.465   0.490   0.188   0.074   0.109   0.325   0.196   0.188
232   L         1.513   1.539   1.623   1.265   1.304   1.448   1.659   1.695   1.834
233   I         1.513   1.539   1.623   1.555   1.593   1.730   1.659   1.695   1.834
234   L        -0.310  -0.251  -0.211  -0.625  -0.552  -0.465  -0.564  -0.479  -0.441
235   L         0.853   0.804   0.656   0.663   0.603   0.389   0.881   0.798   0.511
236   V         1.513   1.539   1.623   1.716   1.758   1.886   1.659   1.695   1.834
237   L         0.353   0.372   0.451  -0.112  -0.088   0.047  -0.008   0.016   0.109
238   F        -0.614  -0.712  -0.674  -0.339  -0.459  -0.440  -0.675  -0.772  -0.718
239   S         1.513   1.539   1.623   1.438   1.486   1.617   1.659   1.695   1.834
240   K         1.513   1.539   1.623   1.617   1.670   1.791   1.659   1.695   1.834
241   F         1.513   1.539   1.623   1.787   1.833   1.956   1.659   1.695   1.834
242   K        -0.803  -0.721  -0.686  -0.797  -0.690  -0.627  -0.897  -0.797  -0.732
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q04338
Output conservation file - output/Q04338
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
