1     M         1.694   1.736   1.805   2.031   2.094   2.204   1.874   1.937   2.056
2     S        -0.197  -0.232  -0.255  -0.229  -0.289  -0.337  -0.304  -0.358  -0.390
3     P        -0.957  -0.962  -0.918  -0.860  -0.907  -0.855  -0.926  -0.920  -0.853
4     M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     K        -0.405  -0.346  -0.344  -0.522  -0.428  -0.408  -0.615  -0.534  -0.517
8     V        -0.033  -0.162  -0.215  -0.075  -0.258  -0.353  -0.071  -0.256  -0.332
9     A        -0.319  -0.399  -0.326  -0.670  -0.821  -0.694  -0.503  -0.590  -0.493
10    V         0.797   0.922   0.678   0.718   0.903   0.531   0.793   0.988   0.565
11    V        -0.319  -0.202  -0.275  -0.419  -0.184  -0.347  -0.503  -0.329  -0.423
12    G         1.694   1.736   1.805   1.722   1.785   1.897   1.874   1.937   2.056
13    A        -0.033  -0.162  -0.215  -0.101  -0.316  -0.392  -0.071  -0.256  -0.332
14    S        -0.952  -0.859  -0.879  -0.754  -0.589  -0.630  -0.935  -0.821  -0.815
15    G         1.694   1.736   1.805   1.722   1.785   1.897   1.874   1.937   2.056
16    K         0.797   0.857   0.667   0.889   0.994   0.724   0.793   0.887   0.546
17    V         0.314   0.353   0.434  -0.121  -0.068   0.072  -0.071  -0.012   0.105
18    G         0.797   0.649   0.625   0.834   0.591   0.537   0.793   0.536   0.468
19    R        -1.412  -1.406  -1.357  -1.150  -1.177  -1.059  -1.151  -1.129  -1.050
20    L         0.797   0.825   0.663   0.855   0.912   0.684   0.793   0.835   0.538
21    L        -0.319  -0.294  -0.298  -0.460  -0.400  -0.418  -0.503  -0.478  -0.461
22    I        -1.412  -1.320  -1.324  -1.352  -1.203  -1.217  -1.151  -1.042  -1.020
23    N        -1.412  -1.285  -1.323  -1.414  -1.196  -1.271  -1.151  -1.008  -1.019
24    Q        -1.412  -1.408  -1.357  -1.374  -1.391  -1.278  -1.151  -1.131  -1.050
25    L         0.797   0.649   0.625   0.779   0.549   0.483   0.793   0.536   0.468
26    K        -0.778  -0.856  -0.880  -0.843  -0.967  -1.059  -0.719  -0.802  -0.812
27    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
28    A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
29    N         0.575   0.680   0.544   0.489   0.663   0.434   0.415   0.590   0.316
30    D        -1.871  -1.816  -1.741  -1.941  -1.810  -1.732  -1.367  -1.300  -1.200
31    S        -0.033  -0.119  -0.205   0.010  -0.154  -0.304  -0.071  -0.199  -0.318
32    F        -0.952  -0.988  -0.893  -0.914  -0.982  -0.839  -0.935  -0.951  -0.829
33    S        -1.871  -1.816  -1.741  -1.616  -1.473  -1.410  -1.367  -1.300  -1.200
34    T        -1.412  -1.423  -1.362  -1.320  -1.375  -1.247  -1.151  -1.142  -1.055
35    P        -0.033  -0.162  -0.215   0.270   0.038  -0.081  -0.071  -0.256  -0.332
36    L        -0.952  -0.952  -0.909  -1.062  -1.018  -0.966  -0.935  -0.919  -0.845
37    A         0.797   0.649   0.625   0.754   0.541   0.509   0.793   0.536   0.468
38    I        -0.319  -0.202  -0.275  -0.576  -0.380  -0.471  -0.503  -0.329  -0.423
39    V         1.694   1.736   1.805   1.593   1.666   1.769   1.874   1.937   2.056
40    R         1.694   1.736   1.805   1.852   1.914   2.026   1.874   1.937   2.056
41    T        -0.952  -0.978  -0.891  -0.944  -0.994  -0.843  -0.935  -0.941  -0.827
42    Q        -1.412  -1.408  -1.357  -1.172  -1.153  -1.073  -1.151  -1.131  -1.050
43    D        -0.033  -0.088  -0.200   0.073  -0.033  -0.235  -0.071  -0.160  -0.311
44    Q         1.694   1.736   1.805   1.962   2.036   2.136   1.874   1.937   2.056
45    V        -0.778  -0.856  -0.880  -0.857  -0.966  -1.012  -0.719  -0.802  -0.812
46    N        -0.778  -0.819  -0.833  -0.694  -0.750  -0.770  -0.719  -0.763  -0.759
47    Y        -0.952  -0.950  -0.908  -0.784  -0.818  -0.695  -0.935  -0.917  -0.844
48    F         0.314   0.365   0.446   0.103   0.163   0.300  -0.071   0.012   0.128
49    K        -0.778  -0.795  -0.832  -0.671  -0.694  -0.736  -0.719  -0.736  -0.757
50    N        -0.778  -0.815  -0.833  -0.648  -0.724  -0.769  -0.719  -0.759  -0.759
51    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
52    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
53    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
54    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
55    E         0.575   0.470   0.498   0.586   0.408   0.420   0.415   0.211   0.229
56    V        -0.375  -0.379  -0.339  -0.528  -0.561  -0.449  -0.557  -0.564  -0.508
57    G        -0.197  -0.236  -0.304  -0.114  -0.167  -0.264  -0.304  -0.355  -0.459
58    V         0.355   0.381   0.441  -0.023   0.010   0.106   0.007   0.042   0.118
59    D        -0.778  -0.856  -0.880  -0.709  -0.834  -0.863  -0.719  -0.802  -0.812
60    A        -0.952  -0.966  -0.912  -1.181  -1.181  -1.108  -0.935  -0.930  -0.848
61    S        -0.778  -0.710  -0.826  -0.778  -0.661  -0.885  -0.719  -0.624  -0.750
62    L        -0.778  -0.856  -0.880  -0.714  -0.857  -0.848  -0.719  -0.802  -0.812
63    T        -1.412  -1.406  -1.357  -1.258  -1.195  -1.167  -1.151  -1.129  -1.050
64    D        -0.319  -0.226  -0.280  -0.427  -0.287  -0.360  -0.503  -0.381  -0.431
65    I        -0.319  -0.202  -0.275  -0.601  -0.387  -0.532  -0.503  -0.329  -0.423
66    E         0.427   0.468   0.494   0.322   0.397   0.406   0.145   0.209   0.221
67    N        -0.778  -0.781  -0.834  -0.648  -0.668  -0.770  -0.719  -0.721  -0.760
68    A         0.797   0.879   0.669   0.732   0.848   0.542   0.793   0.921   0.548
69    S         0.314   0.352   0.434   0.088   0.149   0.281  -0.071  -0.013   0.104
70    V         0.797   0.649   0.625   0.791   0.605   0.574   0.793   0.536   0.468
71    S        -1.412  -1.369  -1.334  -1.275  -1.211  -1.141  -1.151  -1.096  -1.030
72    E        -0.319  -0.291  -0.297  -0.345  -0.327  -0.300  -0.503  -0.474  -0.460
73    I         0.797   0.922   0.678   0.781   0.953   0.595   0.793   0.988   0.565
74    T        -0.033   0.149  -0.145  -0.028   0.221  -0.170  -0.071   0.189  -0.231
75    D        -1.412  -1.400  -1.336  -1.323  -1.258  -1.193  -1.151  -1.124  -1.031
76    A        -0.033  -0.136  -0.215  -0.094  -0.244  -0.381  -0.071  -0.222  -0.331
77    I        -0.319  -0.373  -0.295  -0.451  -0.543  -0.408  -0.503  -0.551  -0.451
78    K        -0.778  -0.795  -0.832  -0.775  -0.828  -0.874  -0.719  -0.736  -0.757
79    A        -0.778  -0.785  -0.835  -0.782  -0.791  -0.898  -0.719  -0.724  -0.761
80    Y        -0.778  -0.756  -0.835  -0.337  -0.363  -0.433  -0.719  -0.693  -0.761
81    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
82    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
83    D         0.797   0.879   0.669   0.861   0.981   0.675   0.793   0.921   0.548
84    A         0.797   0.649   0.625   0.701   0.462   0.410   0.793   0.536   0.468
85    V         1.694   1.736   1.805   1.593   1.666   1.769   1.874   1.937   2.056
86    V         0.797   0.649   0.625   0.718   0.491   0.437   0.793   0.536   0.468
87    F         1.694   1.736   1.805   1.893   1.969   2.067   1.874   1.937   2.056
88    S        -0.319  -0.374  -0.295  -0.447  -0.549  -0.423  -0.503  -0.553  -0.452
89    A         0.797   0.825   0.663   0.701   0.743   0.479   0.793   0.835   0.538
90    G         1.694   1.736   1.805   1.722   1.785   1.897   1.874   1.937   2.056
91    A         0.427   0.468   0.494   0.138   0.199   0.234   0.145   0.209   0.221
92    G         0.797   0.825   0.663   0.834   0.875   0.607   0.793   0.835   0.538
93    G         1.694   1.736   1.805   1.722   1.785   1.897   1.874   1.937   2.056
94    K         1.694   1.736   1.805   1.700   1.783   1.876   1.874   1.937   2.056
95    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
96    G         0.575   0.653   0.551   0.519   0.640   0.464   0.415   0.543   0.330
97    M        -1.065  -0.991  -0.938  -1.046  -0.894  -0.844  -1.043  -0.948  -0.874
98    E         1.694   1.736   1.805   1.763   1.848   1.938   1.874   1.937   2.056
99    R         0.427   0.468   0.494   0.428   0.490   0.520   0.145   0.209   0.221
100   I        -0.319  -0.399  -0.326  -0.549  -0.670  -0.546  -0.503  -0.590  -0.493
101   F        -0.319  -0.399  -0.326  -0.324  -0.439  -0.338  -0.503  -0.590  -0.493
102   T        -0.319  -0.399  -0.326  -0.322  -0.466  -0.347  -0.503  -0.590  -0.493
103   V         1.694   1.736   1.805   1.593   1.666   1.769   1.874   1.937   2.056
104   D         1.694   1.736   1.805   1.705   1.771   1.880   1.874   1.937   2.056
105   L         0.797   0.649   0.625   0.851   0.658   0.618   0.793   0.536   0.468
106   D         0.427   0.413   0.455   0.275   0.243   0.300   0.145   0.104   0.146
107   G         0.797   0.825   0.663   0.834   0.875   0.607   0.793   0.835   0.538
108   C         0.314   0.365   0.446   0.179   0.220   0.357  -0.071   0.012   0.128
109   I        -0.952  -0.860  -0.885  -1.142  -1.016  -0.998  -0.935  -0.828  -0.820
110   K         1.694   1.736   1.805   1.700   1.783   1.876   1.874   1.937   2.056
111   V         0.427   0.468   0.494   0.162   0.231   0.261   0.145   0.209   0.221
112   V        -0.952  -0.966  -0.912  -1.012  -0.980  -0.930  -0.935  -0.930  -0.848
113   E         0.427   0.401   0.450   0.322   0.259   0.309   0.145   0.081   0.135
114   A         1.694   1.736   1.805   1.588   1.651   1.765   1.874   1.937   2.056
115   C        -0.778  -0.856  -0.880  -0.394  -0.511  -0.607  -0.719  -0.802  -0.812
116   E        -0.319  -0.324  -0.315  -0.366  -0.378  -0.374  -0.503  -0.510  -0.482
117   K        -0.492  -0.444  -0.360  -0.763  -0.685  -0.549  -0.719  -0.647  -0.536
118   A         0.797   0.922   0.678   0.732   0.905   0.558   0.793   0.988   0.565
119   G        -0.778  -0.710  -0.826  -0.639  -0.534  -0.694  -0.719  -0.624  -0.750
120   I         0.427   0.468   0.494   0.128   0.186   0.211   0.145   0.209   0.221
121   K        -0.319  -0.187  -0.278  -0.359  -0.138  -0.293  -0.503  -0.317  -0.428
122   R         1.694   1.736   1.805   1.852   1.914   2.026   1.874   1.937   2.056
123   F         0.427   0.395   0.449   0.385   0.304   0.354   0.145   0.070   0.133
124   V         0.314   0.362   0.442  -0.121  -0.042   0.093  -0.071   0.006   0.119
125   V        -0.952  -0.978  -0.891  -1.123  -1.110  -0.985  -0.935  -0.941  -0.827
126   V         0.314   0.365   0.446  -0.121  -0.035   0.104  -0.071   0.012   0.128
127   S         1.694   1.736   1.805   1.743   1.814   1.918   1.874   1.937   2.056
128   A         1.694   1.736   1.805   1.588   1.651   1.765   1.874   1.937   2.056
129   L         0.314   0.352   0.434  -0.066  -0.011   0.127  -0.071  -0.013   0.104
130   K        -0.319  -0.399  -0.326  -0.323  -0.435  -0.319  -0.503  -0.590  -0.493
131   A         0.797   0.649   0.625   0.754   0.541   0.509   0.793   0.536   0.468
132   E        -0.319  -0.399  -0.326  -0.377  -0.488  -0.378  -0.503  -0.590  -0.493
133   D         0.797   0.825   0.663   0.869   0.915   0.680   0.793   0.835   0.538
134   R         0.797   0.649   0.625   1.051   0.847   0.824   0.793   0.536   0.468
135   D        -0.952  -0.966  -0.912  -1.000  -1.013  -0.923  -0.935  -0.930  -0.848
136   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
137   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
138   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
139   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
140   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
141   F         0.427   0.395   0.449   0.508   0.450   0.523   0.145   0.070   0.133
142   W        -0.319  -0.399  -0.326  -0.024  -0.135  -0.034  -0.503  -0.590  -0.493
143   Y        -1.412  -1.406  -1.357  -1.139  -1.166  -1.069  -1.151  -1.129  -1.050
144   N        -1.412  -1.360  -1.359  -1.469  -1.418  -1.390  -1.151  -1.088  -1.051
145   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
146   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
147   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
148   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
149   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
150   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
151   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
152   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
153   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
154   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
155   K        -1.871  -1.816  -1.741  -1.713  -1.575  -1.506  -1.367  -1.300  -1.200
156   G        -0.778  -0.823  -0.839  -0.705  -0.792  -0.801  -0.719  -0.766  -0.765
157   L         0.797   0.649   0.625   0.792   0.566   0.508   0.793   0.536   0.468
158   R         0.797   0.649   0.625   0.990   0.756   0.709   0.793   0.536   0.468
159   E        -0.033  -0.088  -0.200   0.184   0.089  -0.086  -0.071  -0.160  -0.311
160   Y         1.694   1.736   1.805   1.942   2.011   2.116   1.874   1.937   2.056
161   Y         1.694   1.736   1.805   1.942   2.011   2.116   1.874   1.937   2.056
162   I         0.797   0.649   0.625   0.856   0.653   0.640   0.793   0.536   0.468
163   A         0.797   0.649   0.625   0.774   0.569   0.546   0.793   0.536   0.468
164   K         1.694   1.736   1.805   1.700   1.783   1.876   1.874   1.937   2.056
165   R        -1.412  -1.360  -1.359  -1.027  -0.938  -0.963  -1.151  -1.088  -1.051
166   S        -1.412  -1.408  -1.357  -1.400  -1.400  -1.279  -1.151  -1.131  -1.050
167   A         1.694   1.736   1.805   1.588   1.651   1.765   1.874   1.937   2.056
168   D         1.694   1.736   1.805   1.705   1.771   1.880   1.874   1.937   2.056
169   R        -0.319  -0.284  -0.295  -0.150  -0.110  -0.081  -0.503  -0.463  -0.457
170   E        -0.492  -0.452  -0.361  -0.612  -0.556  -0.400  -0.719  -0.658  -0.538
171   V         0.314   0.365   0.446  -0.112  -0.007   0.115  -0.071   0.012   0.128
172   R        -0.319  -0.307  -0.313  -0.347  -0.382  -0.343  -0.503  -0.492  -0.479
173   N        -0.778  -0.843  -0.842  -0.608  -0.719  -0.732  -0.719  -0.788  -0.769
174   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
175   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
176   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
177   S        -0.778  -0.710  -0.826  -0.686  -0.578  -0.764  -0.719  -0.624  -0.750
178   N        -0.492  -0.446  -0.363  -0.705  -0.631  -0.506  -0.719  -0.650  -0.540
179   L         0.797   0.649   0.625   0.792   0.566   0.508   0.793   0.536   0.468
180   D         0.797   0.879   0.669   0.869   0.987   0.690   0.793   0.921   0.548
181   Y        -0.319  -0.298  -0.294  -0.049  -0.012   0.009  -0.503  -0.478  -0.455
182   T         1.694   1.736   1.805   1.785   1.851   1.960   1.874   1.937   2.056
183   I         1.694   1.736   1.805   1.653   1.710   1.829   1.874   1.937   2.056
184   L         1.694   1.736   1.805   1.666   1.742   1.842   1.874   1.937   2.056
185   Q        -0.319  -0.399  -0.326  -0.248  -0.365  -0.267  -0.503  -0.590  -0.493
186   P         1.694   1.736   1.805   2.003   2.077   2.176   1.874   1.937   2.056
187   G        -0.319  -0.324  -0.315  -0.446  -0.469  -0.431  -0.503  -0.510  -0.482
188   S        -0.778  -0.781  -0.834  -0.590  -0.627  -0.651  -0.719  -0.721  -0.760
189   L         0.797   0.649   0.625   0.869   0.684   0.653   0.793   0.536   0.468
190   E        -0.952  -0.875  -0.883  -0.973  -0.846  -0.861  -0.935  -0.837  -0.818
191   L        -0.952  -0.859  -0.879  -1.019  -0.881  -0.898  -0.935  -0.821  -0.815
192   N        -0.778  -0.843  -0.842  -0.622  -0.731  -0.751  -0.719  -0.788  -0.769
193   K        -0.778  -0.679  -0.814  -0.789  -0.616  -0.861  -0.719  -0.588  -0.737
194   G        -0.033   0.030  -0.161  -0.002   0.089  -0.228  -0.071   0.022  -0.255
195   T         0.797   0.649   0.625   0.928   0.704   0.654   0.793   0.536   0.468
196   G         1.694   1.736   1.805   1.722   1.785   1.897   1.874   1.937   2.056
197   L         0.797   0.916   0.675   0.828   1.019   0.635   0.793   0.980   0.560
198   L        -0.319  -0.399  -0.326  -0.601  -0.745  -0.633  -0.503  -0.590  -0.493
199   Q        -1.412  -1.360  -1.359  -1.207  -1.179  -1.127  -1.151  -1.088  -1.051
200   P        -0.952  -0.966  -0.912  -0.922  -0.982  -0.867  -0.935  -0.930  -0.848
201   L        -0.405  -0.346  -0.344  -0.621  -0.542  -0.486  -0.615  -0.534  -0.517
202   D        -0.197  -0.236  -0.304  -0.272  -0.345  -0.482  -0.304  -0.355  -0.459
203   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
204   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
205   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
206   E        -1.412  -1.388  -1.333  -1.250  -1.231  -1.116  -1.151  -1.113  -1.028
207   K        -0.033   0.012  -0.194   0.052   0.135  -0.189  -0.071  -0.003  -0.302
208   A        -1.412  -1.408  -1.357  -1.516  -1.522  -1.444  -1.151  -1.131  -1.050
209   S        -0.952  -0.909  -0.885  -1.045  -0.967  -0.921  -0.935  -0.870  -0.820
210   V        -1.871  -1.816  -1.741  -1.972  -1.880  -1.762  -1.367  -1.300  -1.200
211   N        -0.778  -0.710  -0.826  -0.616  -0.507  -0.712  -0.719  -0.624  -0.750
212   Y        -1.412  -1.423  -1.362  -1.063  -1.056  -0.990  -1.151  -1.142  -1.055
213   S        -1.412  -1.398  -1.336  -1.272  -1.222  -1.143  -1.151  -1.122  -1.031
214   I         0.797   0.649   0.625   0.857   0.653   0.641   0.793   0.536   0.468
215   N        -1.412  -1.382  -1.334  -1.272  -1.252  -1.135  -1.151  -1.108  -1.029
216   R         1.694   1.736   1.805   1.852   1.914   2.026   1.874   1.937   2.056
217   E        -0.778  -0.710  -0.826  -0.767  -0.642  -0.896  -0.719  -0.624  -0.750
218   D         0.797   0.649   0.625   0.869   0.657   0.618   0.793   0.536   0.468
219   V         1.694   1.736   1.805   1.593   1.666   1.769   1.874   1.937   2.056
220   A         1.694   1.736   1.805   1.588   1.651   1.765   1.874   1.937   2.056
221   S        -0.952  -0.877  -0.883  -0.928  -0.798  -0.816  -0.935  -0.839  -0.819
222   F        -0.319  -0.362  -0.293  -0.467  -0.520  -0.407  -0.503  -0.535  -0.448
223   I         0.797   0.649   0.625   0.767   0.521   0.472   0.793   0.536   0.468
224   V        -0.033  -0.162  -0.215  -0.059  -0.261  -0.327  -0.071  -0.256  -0.332
225   E        -0.952  -0.969  -0.880  -0.877  -0.910  -0.772  -0.935  -0.934  -0.817
226   S        -0.952  -0.975  -0.894  -1.027  -1.042  -0.909  -0.935  -0.939  -0.829
227   L        -0.033  -0.162  -0.215  -0.094  -0.319  -0.439  -0.071  -0.256  -0.332
228   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
229   H        -0.319  -0.399  -0.326  -0.165  -0.311  -0.210  -0.503  -0.590  -0.493
230   P        -0.319  -0.218  -0.248  -0.294  -0.147  -0.172  -0.503  -0.349  -0.384
231   N        -0.952  -0.870  -0.875  -1.027  -0.877  -0.902  -0.935  -0.836  -0.812
232   A        -1.871  -1.816  -1.741  -1.801  -1.656  -1.593  -1.367  -1.300  -1.200
233   T         0.797   0.649   0.625   0.928   0.704   0.654   0.793   0.536   0.468
234   V        -0.952  -0.840  -0.881  -1.055  -0.889  -0.964  -0.935  -0.808  -0.816
235   K        -1.412  -1.360  -1.359  -1.212  -1.098  -1.099  -1.151  -1.088  -1.051
236   K         0.797   0.649   0.625   0.828   0.616   0.545   0.793   0.536   0.468
237   T        -0.319  -0.399  -0.326  -0.446  -0.593  -0.484  -0.503  -0.590  -0.493
238   I        -0.319  -0.399  -0.326  -0.442  -0.584  -0.454  -0.503  -0.590  -0.493
239   S        -0.952  -0.966  -0.912  -0.883  -0.910  -0.792  -0.935  -0.930  -0.848
240   L        -0.319  -0.399  -0.326  -0.471  -0.557  -0.431  -0.503  -0.590  -0.493
241   V        -0.778  -0.798  -0.833  -0.932  -0.973  -1.038  -0.719  -0.740  -0.759
242   N        -0.033  -0.136  -0.215   0.203   0.029  -0.080  -0.071  -0.222  -0.331
243   G         1.694   1.736   1.805   1.722   1.785   1.897   1.874   1.937   2.056
244   N        -0.319  -0.285  -0.296  -0.418  -0.373  -0.371  -0.503  -0.464  -0.458
245   E        -0.319  -0.259  -0.296  -0.574  -0.499  -0.535  -0.503  -0.435  -0.458
246   P        -0.319  -0.253  -0.288  -0.282  -0.171  -0.252  -0.503  -0.412  -0.441
247   M         0.797   0.916   0.675   0.857   1.006   0.715   0.793   0.980   0.560
248   E        -0.952  -0.950  -0.908  -0.897  -0.865  -0.823  -0.935  -0.917  -0.844
249   K         0.427   0.411   0.455   0.226   0.185   0.234   0.145   0.101   0.145
250   F         0.575   0.446   0.498   0.635   0.359   0.421   0.415   0.166   0.229
251   I         0.575   0.653   0.551   0.476   0.591   0.406   0.415   0.543   0.330
252   Q        -0.778  -0.798  -0.833  -0.655  -0.720  -0.718  -0.719  -0.740  -0.759
253   S        -0.952  -0.988  -0.893  -0.973  -1.034  -0.862  -0.935  -0.951  -0.829
254   L        -0.319  -0.399  -0.326  -0.513  -0.612  -0.495  -0.503  -0.590  -0.493
255   -        -0.375  -0.348  -0.311  -0.356  -0.350  -0.278  -0.557  -0.519  -0.469
256   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
257   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
258   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
259   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
260   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
261   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
262   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
263   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
264   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
265   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
266   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q04304
Output conservation file - output/Q04304
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
