1     M         1.834   1.856   1.901   2.126   2.179   2.238   2.024   2.054   2.124
2     S         0.543   0.541   0.464   0.632   0.631   0.513   0.452   0.446   0.305
3     K        -0.552  -0.555  -0.566  -0.563  -0.560  -0.576  -0.596  -0.597  -0.600
4     S        -0.552  -0.561  -0.565  -0.563  -0.569  -0.574  -0.596  -0.604  -0.598
5     T        -1.347  -1.327  -1.296  -1.255  -1.222  -1.165  -1.120  -1.089  -1.035
6     N        -1.347  -1.327  -1.296  -1.245  -1.202  -1.155  -1.120  -1.089  -1.035
7     V        -0.552  -0.555  -0.566  -0.796  -0.783  -0.852  -0.596  -0.597  -0.600
8     S        -0.552  -0.555  -0.566  -0.465  -0.471  -0.476  -0.596  -0.597  -0.600
9     Y         0.543   0.464   0.442   0.822   0.719   0.684   0.452   0.316   0.267
10    E        -0.552  -0.606  -0.583  -0.582  -0.658  -0.631  -0.596  -0.661  -0.621
11    R        -1.347  -1.327  -1.296  -1.132  -1.113  -1.042  -1.120  -1.089  -1.035
12    V        -0.552  -0.606  -0.583  -0.624  -0.709  -0.682  -0.596  -0.661  -0.621
13    E        -1.347  -1.327  -1.296  -1.403  -1.378  -1.314  -1.120  -1.089  -1.035
14    L        -1.347  -1.327  -1.296  -1.507  -1.450  -1.419  -1.120  -1.089  -1.035
15    F        -0.552  -0.606  -0.583  -0.348  -0.434  -0.387  -0.596  -0.661  -0.621
16    E        -0.552  -0.507  -0.547  -0.495  -0.423  -0.476  -0.596  -0.531  -0.575
17    N        -0.552  -0.561  -0.565  -0.465  -0.476  -0.469  -0.596  -0.604  -0.598
18    P        -0.552  -0.561  -0.565  -0.446  -0.517  -0.486  -0.596  -0.604  -0.598
19    K         0.243   0.269   0.310   0.102   0.165   0.226  -0.072  -0.029   0.031
20    V        -1.347  -1.327  -1.296  -1.476  -1.460  -1.387  -1.120  -1.089  -1.035
21    P         0.543   0.464   0.442   0.817   0.678   0.618   0.452   0.316   0.267
22    I        -1.347  -1.327  -1.296  -1.091  -1.046  -1.000  -1.120  -1.089  -1.035
23    E         1.834   1.856   1.901   1.867   1.906   1.977   2.024   2.054   2.124
24    V         0.243   0.269   0.310  -0.027   0.021   0.082  -0.072  -0.029   0.031
25    E         1.834   1.856   1.901   1.867   1.906   1.977   2.024   2.054   2.124
26    D         1.834   1.856   1.901   1.777   1.817   1.887   2.024   2.054   2.124
27    E         1.834   1.856   1.901   1.867   1.906   1.977   2.024   2.054   2.124
28    I         0.543   0.541   0.464   0.501   0.499   0.366   0.452   0.446   0.305
29    L         1.834   1.856   1.901   1.501   1.527   1.609   2.024   2.054   2.124
30    E        -0.552  -0.507  -0.547  -0.574  -0.505  -0.564  -0.596  -0.531  -0.575
31    K        -1.347  -1.327  -1.296  -1.226  -1.186  -1.136  -1.120  -1.089  -1.035
32    Y         1.834   1.856   1.901   2.041   2.087   2.152   2.024   2.054   2.124
33    A        -0.552  -0.606  -0.583  -0.567  -0.693  -0.667  -0.596  -0.661  -0.621
34    E         0.243   0.269   0.310   0.032   0.078   0.146  -0.072  -0.029   0.031
35    S        -0.552  -0.561  -0.565  -0.502  -0.528  -0.536  -0.596  -0.604  -0.598
36    S         0.243   0.269   0.310   0.083   0.121   0.197  -0.072  -0.029   0.031
37    L         0.543   0.541   0.464   0.186   0.175   0.060   0.452   0.446   0.305
38    D         0.543   0.620   0.485   0.516   0.645   0.408   0.452   0.577   0.342
39    H        -0.552  -0.561  -0.565  -0.309  -0.338  -0.321  -0.596  -0.604  -0.598
40    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
41    D         0.543   0.541   0.464   0.457   0.459   0.324   0.452   0.446   0.305
42    M         0.243   0.269   0.310   0.295   0.346   0.401  -0.072  -0.029   0.031
43    T        -1.347  -1.327  -1.296  -1.298  -1.248  -1.209  -1.120  -1.089  -1.035
44    V        -0.552  -0.606  -0.583  -0.617  -0.725  -0.673  -0.596  -0.661  -0.621
45    N        -1.347  -1.327  -1.296  -0.993  -0.939  -0.902  -1.120  -1.089  -1.035
46    E        -0.552  -0.561  -0.565  -0.590  -0.585  -0.595  -0.596  -0.604  -0.598
47    L        -0.552  -0.507  -0.547  -0.842  -0.793  -0.812  -0.596  -0.531  -0.575
48    P        -0.552  -0.507  -0.547  -0.337  -0.249  -0.340  -0.596  -0.531  -0.575
49    R        -1.347  -1.327  -1.296  -1.002  -0.974  -0.911  -1.120  -1.089  -1.035
50    F         0.243   0.259   0.304   0.234   0.271   0.335  -0.072  -0.047   0.019
51    F        -0.552  -0.606  -0.583  -0.574  -0.700  -0.657  -0.596  -0.661  -0.621
52    K        -1.347  -1.327  -1.296  -1.284  -1.233  -1.194  -1.120  -1.089  -1.035
53    D        -1.347  -1.327  -1.296  -1.288  -1.230  -1.199  -1.120  -1.089  -1.035
54    L         1.834   1.856   1.901   1.501   1.527   1.609   2.024   2.054   2.124
55    Q         0.543   0.630   0.486   0.779   0.919   0.677   0.452   0.592   0.344
56    L         0.243   0.269   0.310  -0.300  -0.242  -0.169  -0.072  -0.029   0.031
57    E        -0.552  -0.513  -0.551  -0.337  -0.265  -0.349  -0.596  -0.539  -0.580
58    P        -1.347  -1.327  -1.296  -1.114  -1.102  -1.023  -1.120  -1.089  -1.035
59    T        -1.347  -1.327  -1.296  -1.055  -1.007  -0.964  -1.120  -1.089  -1.035
60    I        -0.552  -0.513  -0.551  -0.366  -0.289  -0.358  -0.596  -0.539  -0.580
61    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
62    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
63    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
64    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
65    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
66    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
67    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
68    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
69    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
70    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
71    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
72    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
73    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
74    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
75    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
76    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
77    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
78    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
79    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
80    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
81    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
82    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
83    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
84    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
85    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
86    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
87    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
88    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
89    W         0.543   0.620   0.485   0.825   0.947   0.753   0.452   0.577   0.342
90    K         0.543   0.541   0.464   0.567   0.569   0.451   0.452   0.446   0.305
91    L        -0.552  -0.555  -0.566  -0.667  -0.675  -0.636  -0.596  -0.597  -0.600
92    V        -0.552  -0.606  -0.583  -0.679  -0.759  -0.748  -0.596  -0.661  -0.621
93    R        -0.552  -0.606  -0.583  -0.495  -0.602  -0.568  -0.596  -0.661  -0.621
94    N        -1.347  -1.327  -1.296  -1.179  -1.148  -1.089  -1.120  -1.089  -1.035
95    E        -1.347  -1.327  -1.296  -1.388  -1.329  -1.299  -1.120  -1.089  -1.035
96    D         0.243   0.259   0.304   0.121   0.155   0.227  -0.072  -0.047   0.019
97    V         0.243   0.269   0.310  -0.265  -0.243  -0.176  -0.072  -0.029   0.031
98    I        -0.552  -0.507  -0.547  -0.502  -0.423  -0.479  -0.596  -0.531  -0.575
99    I         0.243   0.269   0.310  -0.300  -0.291  -0.208  -0.072  -0.029   0.031
100   E        -0.552  -0.606  -0.583  -0.563  -0.641  -0.609  -0.596  -0.661  -0.621
101   G         0.543   0.464   0.442   0.768   0.653   0.608   0.452   0.316   0.267
102   T         0.543   0.541   0.464   0.598   0.585   0.455   0.452   0.446   0.305
103   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
104   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
105   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
106   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
107   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
108   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
109   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
110   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
111   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
112   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
113   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
114   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
115   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
116   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
117   D         1.834   1.856   1.901   1.777   1.817   1.887   2.024   2.054   2.124
118   V         0.243   0.259   0.304  -0.027   0.004   0.071  -0.072  -0.047   0.019
119   I         0.243   0.259   0.304  -0.027   0.008   0.073  -0.072  -0.047   0.019
120   D         1.834   1.856   1.901   1.777   1.817   1.887   2.024   2.054   2.124
121   F         0.543   0.464   0.442   0.666   0.533   0.479   0.452   0.316   0.267
122   T        -0.552  -0.513  -0.551  -0.667  -0.607  -0.662  -0.596  -0.539  -0.580
123   K         1.834   1.856   1.901   1.831   1.868   1.941   2.024   2.054   2.124
124   L         1.834   1.856   1.901   1.501   1.527   1.609   2.024   2.054   2.124
125   V        -0.552  -0.561  -0.565  -0.969  -0.990  -0.978  -0.596  -0.604  -0.598
126   R        -0.552  -0.507  -0.547  -0.529  -0.443  -0.534  -0.596  -0.531  -0.575
127   C        -1.347  -1.327  -1.296  -1.269  -1.209  -1.180  -1.120  -1.089  -1.035
128   T         0.543   0.464   0.442   0.683   0.554   0.532   0.452   0.316   0.267
129   C        -0.552  -0.561  -0.565  -0.232  -0.243  -0.233  -0.596  -0.604  -0.598
130   Q        -1.347  -1.327  -1.296  -1.006  -1.002  -0.915  -1.120  -1.089  -1.035
131   L         0.543   0.630   0.486   0.170   0.294   0.076   0.452   0.592   0.344
132   L         0.543   0.464   0.442   0.186   0.058   0.024   0.452   0.316   0.267
133   I        -0.552  -0.555  -0.566  -0.675  -0.686  -0.703  -0.596  -0.597  -0.600
134   L         0.543   0.620   0.485   0.567   0.708   0.433   0.452   0.577   0.342
135   M         0.543   0.464   0.442   0.847   0.737   0.682   0.452   0.316   0.267
136   N         0.243   0.259   0.304   0.102   0.139   0.210  -0.072  -0.047   0.020
137   N         0.543   0.464   0.442   0.822   0.699   0.666   0.452   0.316   0.267
138   L        -0.552  -0.561  -0.565  -0.699  -0.689  -0.737  -0.596  -0.604  -0.598
139   T         0.543   0.541   0.464   0.624   0.612   0.489   0.452   0.446   0.305
140   V        -1.347  -1.327  -1.296  -1.424  -1.334  -1.335  -1.120  -1.089  -1.035
141   I         1.834   1.856   1.901   1.822   1.853   1.932   2.024   2.054   2.124
142   D         0.543   0.464   0.442   0.516   0.404   0.367   0.452   0.316   0.267
143   D        -1.347  -1.327  -1.296  -1.348  -1.293  -1.259  -1.120  -1.089  -1.035
144   L        -0.552  -0.606  -0.583  -0.813  -0.887  -0.816  -0.596  -0.661  -0.621
145   W         1.834   1.856   1.901   2.218   2.258   2.331   2.024   2.054   2.124
146   S        -0.552  -0.561  -0.565  -0.620  -0.644  -0.647  -0.596  -0.604  -0.598
147   M         0.543   0.620   0.485   0.278   0.382   0.213   0.452   0.577   0.342
148   L         0.543   0.464   0.442   0.235   0.114   0.093   0.452   0.316   0.267
149   I        -0.552  -0.606  -0.583  -0.821  -0.926  -0.907  -0.596  -0.661  -0.621
150   R        -0.552  -0.606  -0.583  -0.529  -0.637  -0.608  -0.596  -0.661  -0.621
151   N        -1.347  -1.327  -1.296  -1.046  -1.006  -0.955  -1.120  -1.089  -1.035
152   C        -1.347  -1.327  -1.296  -1.028  -1.004  -0.937  -1.120  -1.089  -1.035
153   G         0.543   0.464   0.442   0.735   0.606   0.562   0.452   0.316   0.267
154   R        -0.552  -0.555  -0.566  -0.461  -0.468  -0.496  -0.596  -0.597  -0.600
155   D         0.243   0.269   0.310  -0.336  -0.316  -0.241  -0.072  -0.029   0.031
156   V        -1.347  -1.327  -1.296  -1.132  -1.095  -1.042  -1.120  -1.089  -1.035
157   D        -0.552  -0.507  -0.547  -0.495  -0.428  -0.465  -0.596  -0.531  -0.575
158   F        -0.552  -0.555  -0.566  -0.410  -0.421  -0.432  -0.596  -0.597  -0.600
159   P         0.243   0.259   0.304   0.258   0.277   0.354  -0.072  -0.047   0.019
160   Q        -1.347  -1.327  -1.296  -1.279  -1.250  -1.189  -1.120  -1.089  -1.035
161   V        -0.552  -0.555  -0.566  -0.703  -0.738  -0.744  -0.596  -0.597  -0.600
162   A        -0.552  -0.555  -0.566  -0.439  -0.452  -0.480  -0.596  -0.597  -0.600
163   L        -0.552  -0.555  -0.566  -0.969  -0.972  -0.980  -0.596  -0.597  -0.600
164   R        -0.552  -0.555  -0.566  -0.461  -0.468  -0.496  -0.596  -0.597  -0.600
165   D        -0.552  -0.606  -0.583  -0.617  -0.686  -0.651  -0.596  -0.661  -0.621
166   H         0.543   0.464   0.442   0.929   0.807   0.762   0.452   0.316   0.267
167   V         0.543   0.464   0.442   0.624   0.524   0.480   0.452   0.316   0.267
168   L         0.543   0.541   0.464   0.170   0.155   0.039   0.452   0.446   0.305
169   S         0.543   0.464   0.442   0.601   0.467   0.433   0.452   0.316   0.267
170   V        -0.552  -0.555  -0.566  -0.800  -0.831  -0.857  -0.596  -0.597  -0.600
171   K         0.543   0.464   0.442   0.613   0.504   0.479   0.452   0.316   0.267
172   D         1.834   1.856   1.901   1.777   1.817   1.887   2.024   2.054   2.124
173   L        -0.552  -0.507  -0.547  -0.879  -0.817  -0.854  -0.596  -0.531  -0.575
174   Q         0.543   0.464   0.442   0.768   0.628   0.579   0.452   0.316   0.267
175   K         1.834   1.856   1.901   1.831   1.868   1.941   2.024   2.054   2.124
176   I         0.543   0.541   0.464   0.573   0.566   0.462   0.452   0.446   0.305
177   S        -1.347  -1.327  -1.296  -1.274  -1.246  -1.184  -1.120  -1.089  -1.035
178   N        -0.552  -0.606  -0.583  -0.417  -0.516  -0.487  -0.596  -0.661  -0.621
179   L        -1.347  -1.327  -1.296  -1.279  -1.218  -1.189  -1.120  -1.089  -1.035
180   I        -0.552  -0.513  -0.551  -0.969  -0.912  -0.959  -0.596  -0.539  -0.580
181   G        -0.552  -0.606  -0.583  -0.413  -0.497  -0.472  -0.596  -0.661  -0.621
182   A        -1.347  -1.327  -1.296  -1.373  -1.373  -1.284  -1.120  -1.089  -1.035
183   D         0.543   0.630   0.486   0.530   0.659   0.455   0.452   0.592   0.344
184   Q         0.543   0.464   0.442   0.779   0.643   0.594   0.452   0.316   0.267
185   S        -1.347  -1.327  -1.296  -1.033  -1.009  -0.942  -1.120  -1.089  -1.035
186   S         0.243   0.259   0.304  -0.001   0.021   0.101  -0.072  -0.047   0.020
187   G        -0.687  -0.669  -0.632  -0.615  -0.577  -0.522  -0.771  -0.741  -0.684
188   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
189   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
190   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
191   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
192   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
193   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
194   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
195   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
196   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
197   T        -0.552  -0.513  -0.551  -0.935  -0.896  -0.921  -0.596  -0.539  -0.580
198   I         0.543   0.541   0.464   0.384   0.368   0.208   0.452   0.446   0.305
199   E        -0.552  -0.513  -0.551  -0.683  -0.617  -0.680  -0.596  -0.539  -0.580
200   M         1.834   1.856   1.901   2.126   2.179   2.238   2.024   2.054   2.124
201   I        -0.552  -0.561  -0.565  -0.800  -0.841  -0.855  -0.596  -0.604  -0.598
202   S         1.834   1.856   1.901   1.902   1.935   2.012   2.024   2.054   2.124
203   C        -0.552  -0.507  -0.547  -0.173  -0.080  -0.164  -0.596  -0.531  -0.575
204   A         0.543   0.464   0.442   0.865   0.748   0.726   0.452   0.316   0.267
205   T         1.834   1.856   1.901   1.937   1.965   2.047   2.024   2.054   2.124
206   D        -1.347  -1.327  -1.296  -1.188  -1.153  -1.098  -1.120  -1.089  -1.035
207   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
208   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
209   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
210   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
211   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
212   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
213   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
214   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
215   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
216   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
217   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
218   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
219   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
220   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
221   G         0.543   0.464   0.442   0.702   0.570   0.515   0.452   0.316   0.267
222   K         0.543   0.541   0.464   0.510   0.508   0.374   0.452   0.446   0.305
223   R         0.543   0.464   0.442   0.760   0.643   0.600   0.452   0.316   0.267
224   L        -0.552  -0.561  -0.565  -0.763  -0.759  -0.812  -0.596  -0.604  -0.598
225   F         0.243   0.259   0.304   0.234   0.271   0.335  -0.072  -0.047   0.019
226   M        -0.552  -0.513  -0.551  -0.544  -0.482  -0.531  -0.596  -0.539  -0.580
227   T         1.834   1.856   1.901   1.937   1.965   2.047   2.024   2.054   2.124
228   Y         0.543   0.464   0.442   0.699   0.568   0.511   0.452   0.316   0.267
229   L         0.543   0.464   0.442   0.173   0.035   0.006   0.452   0.316   0.267
230   D         1.834   1.856   1.901   1.777   1.817   1.887   2.024   2.054   2.124
231   F         1.834   1.856   1.901   2.006   2.050   2.117   2.024   2.054   2.124
232   G         0.543   0.620   0.485   0.809   0.925   0.720   0.452   0.577   0.342
233   C        -1.347  -1.327  -1.296  -1.123  -1.112  -1.033  -1.120  -1.089  -1.035
234   V        -0.552  -0.606  -0.583  -0.800  -0.905  -0.894  -0.596  -0.661  -0.621
235   L         1.834   1.856   1.901   1.501   1.527   1.609   2.024   2.054   2.124
236   G         1.834   1.856   1.901   2.041   2.083   2.152   2.024   2.054   2.124
237   K         0.543   0.464   0.442   0.581   0.465   0.436   0.452   0.316   0.267
238   L         0.543   0.541   0.464   0.278   0.276   0.183   0.452   0.446   0.305
239   G         1.834   1.856   1.901   2.041   2.083   2.152   2.024   2.054   2.124
240   Y        -0.552  -0.606  -0.583  -0.620  -0.733  -0.722  -0.596  -0.661  -0.621
241   L         1.834   1.856   1.901   1.501   1.527   1.609   2.024   2.054   2.124
242   K        -0.552  -0.561  -0.565  -0.529  -0.552  -0.572  -0.596  -0.604  -0.598
243   M        -0.687  -0.675  -0.632  -0.521  -0.499  -0.426  -0.771  -0.747  -0.684
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q04231
Output conservation file - output/Q04231
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
