1     M         1.415   1.415   1.415   1.810   1.809   1.810   1.415   1.415   1.415
2     T        -0.704  -0.704  -0.704  -0.459  -0.463  -0.459  -0.704  -0.704  -0.704
3     T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
6     Q         1.415   1.415   1.415   1.508   1.503   1.508   1.415   1.415   1.415
7     L        -0.704  -0.704  -0.704  -0.668  -0.651  -0.668  -0.704  -0.704  -0.704
8     L        -0.704  -0.704  -0.704  -0.668  -0.651  -0.668  -0.704  -0.704  -0.704
9     S        -0.704  -0.704  -0.704  -0.724  -0.732  -0.724  -0.704  -0.704  -0.704
10    N        -0.704  -0.704  -0.704  -0.772  -0.757  -0.772  -0.704  -0.704  -0.704
11    Y         1.415   1.415   1.415   1.769   1.767   1.769   1.415   1.415   1.415
12    Y         1.415   1.415   1.415   1.769   1.767   1.769   1.415   1.415   1.415
13    K        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
14    A        -0.704  -0.704  -0.704  -0.158  -0.158  -0.158  -0.704  -0.704  -0.704
15    K        -0.704  -0.704  -0.704  -0.621  -0.611  -0.621  -0.704  -0.704  -0.704
16    L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
17    D        -0.704  -0.704  -0.704  -0.716  -0.708  -0.716  -0.704  -0.704  -0.704
18    S        -0.704  -0.704  -0.704  -0.998  -0.992  -0.998  -0.704  -0.704  -0.704
19    E         1.415   1.415   1.415   1.390   1.394   1.390   1.415   1.415   1.415
20    R         1.415   1.415   1.415   1.368   1.362   1.368   1.415   1.415   1.415
21    I         1.415   1.415   1.415   1.614   1.610   1.614   1.415   1.415   1.415
22    Y         1.415   1.415   1.415   1.769   1.767   1.769   1.415   1.415   1.415
23    N        -0.704  -0.704  -0.704  -0.474  -0.463  -0.474  -0.704  -0.704  -0.704
24    E         1.415   1.415   1.415   1.390   1.394   1.390   1.415   1.415   1.415
25    Y         1.415   1.415   1.415   1.769   1.767   1.769   1.415   1.415   1.415
26    V        -0.704  -0.704  -0.704  -0.444  -0.433  -0.444  -0.704  -0.704  -0.704
27    Q        -0.704  -0.704  -0.704  -0.756  -0.757  -0.756  -0.704  -0.704  -0.704
28    S        -0.704  -0.704  -0.704  -0.998  -0.992  -0.998  -0.704  -0.704  -0.704
29    Q        -0.704  -0.704  -0.704  -0.629  -0.635  -0.629  -0.704  -0.704  -0.704
30    Y        -0.704  -0.704  -0.704  -0.436  -0.440  -0.436  -0.704  -0.704  -0.704
31    E         1.415   1.415   1.415   1.390   1.394   1.390   1.415   1.415   1.415
32    F        -0.704  -0.704  -0.704  -0.383  -0.379  -0.383  -0.704  -0.704  -0.704
33    A        -0.704  -0.704  -0.704  -0.332  -0.320  -0.332  -0.704  -0.704  -0.704
34    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
35    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
36    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
37    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
38    S         1.415   1.415   1.415   1.068   1.057   1.068   1.415   1.415   1.415
39    L        -0.704  -0.704  -0.704  -0.846  -0.839  -0.846  -0.704  -0.704  -0.704
40    D         1.415   1.415   1.415   1.368   1.373   1.368   1.415   1.415   1.415
41    K        -0.704  -0.704  -0.704  -0.797  -0.798  -0.797  -0.704  -0.704  -0.704
42    L        -0.704  -0.704  -0.704  -0.558  -0.548  -0.558  -0.704  -0.704  -0.704
43    N        -0.704  -0.704  -0.704  -0.998  -0.992  -0.998  -0.704  -0.704  -0.704
44    N        -0.704  -0.704  -0.704  -0.582  -0.572  -0.582  -0.704  -0.704  -0.704
45    N        -0.704  -0.704  -0.704  -0.998  -0.992  -0.998  -0.704  -0.704  -0.704
46    K        -0.704  -0.704  -0.704  -0.797  -0.798  -0.797  -0.704  -0.704  -0.704
47    G        -0.704  -0.704  -0.704  -0.543  -0.548  -0.543  -0.704  -0.704  -0.704
48    D        -0.704  -0.704  -0.704  -0.676  -0.675  -0.676  -0.704  -0.704  -0.704
49    P        -0.704  -0.704  -0.704  -0.512  -0.502  -0.512  -0.704  -0.704  -0.704
50    K        -0.704  -0.704  -0.704  -0.589  -0.596  -0.589  -0.704  -0.704  -0.704
51    K        -0.704  -0.704  -0.704  -0.947  -0.949  -0.947  -0.704  -0.704  -0.704
52    V        -0.704  -0.704  -0.704  -0.621  -0.611  -0.621  -0.704  -0.704  -0.704
53    V        -0.704  -0.704  -0.704  -0.489  -0.479  -0.489  -0.704  -0.704  -0.704
54    D         1.415   1.415   1.415   1.368   1.373   1.368   1.415   1.415   1.415
55    E         1.415   1.415   1.415   1.390   1.394   1.390   1.415   1.415   1.415
56    T        -0.704  -0.704  -0.704  -0.574  -0.580  -0.574  -0.704  -0.704  -0.704
57    L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
58    F        -0.704  -0.704  -0.704  -0.339  -0.334  -0.339  -0.704  -0.704  -0.704
59    L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
60    Q         1.415   1.415   1.415   1.508   1.503   1.508   1.415   1.415   1.415
61    R         1.415   1.415   1.415   1.368   1.362   1.368   1.415   1.415   1.415
62    Q         1.415   1.415   1.415   1.508   1.503   1.508   1.415   1.415   1.415
63    I        -0.704  -0.704  -0.704  -0.369  -0.357  -0.369  -0.704  -0.704  -0.704
64    A        -0.704  -0.704  -0.704  -0.551  -0.541  -0.551  -0.704  -0.704  -0.704
65    Q        -0.704  -0.704  -0.704  -0.708  -0.716  -0.708  -0.704  -0.704  -0.704
66    L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
67    N        -0.704  -0.704  -0.704  -0.716  -0.708  -0.716  -0.704  -0.704  -0.704
68    K        -0.704  -0.704  -0.704  -0.621  -0.611  -0.621  -0.704  -0.704  -0.704
69    Q        -0.704  -0.704  -0.704  -0.629  -0.627  -0.629  -0.704  -0.704  -0.704
70    L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
71    Q         1.415   1.415   1.415   1.508   1.503   1.508   1.415   1.415   1.415
72    L        -0.704  -0.704  -0.704  -1.093  -1.098  -1.093  -0.704  -0.704  -0.704
73    S        -0.704  -0.704  -0.704  -0.613  -0.619  -0.613  -0.704  -0.704  -0.704
74    F        -0.704  -0.704  -0.704  -0.229  -0.224  -0.229  -0.704  -0.704  -0.704
75    Q        -0.704  -0.704  -0.704  -0.317  -0.320  -0.317  -0.704  -0.704  -0.704
76    E         1.415   1.415   1.415   1.390   1.394   1.390   1.415   1.415   1.415
77    N         1.415   1.415   1.415   1.314   1.328   1.314   1.415   1.415   1.415
78    E         1.415   1.415   1.415   1.390   1.394   1.390   1.415   1.415   1.415
79    K        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
80    L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
81    L        -0.704  -0.704  -0.704  -0.863  -0.864  -0.863  -0.704  -0.704  -0.704
82    S        -0.704  -0.704  -0.704  -0.938  -0.941  -0.938  -0.704  -0.704  -0.704
83    V        -0.704  -0.704  -0.704  -0.258  -0.238  -0.258  -0.704  -0.704  -0.704
84    Q         1.415   1.415   1.415   1.508   1.503   1.508   1.415   1.415   1.415
85    K         1.415   1.415   1.415   1.259   1.250   1.259   1.415   1.415   1.415
86    N        -0.704  -0.704  -0.704  -0.716  -0.708  -0.716  -0.704  -0.704  -0.704
87    Q         1.415   1.415   1.415   1.508   1.503   1.508   1.415   1.415   1.415
88    K         1.415   1.415   1.415   1.259   1.250   1.259   1.415   1.415   1.415
89    A        -0.704  -0.704  -0.704  -0.413  -0.417  -0.413  -0.704  -0.704  -0.704
90    L        -0.704  -0.704  -0.704  -0.676  -0.675  -0.676  -0.704  -0.704  -0.704
91    Y        -0.704  -0.704  -0.704  -0.558  -0.556  -0.558  -0.704  -0.704  -0.704
92    Q        -0.704  -0.704  -0.704  -0.613  -0.611  -0.613  -0.704  -0.704  -0.704
93    S         1.415   1.415   1.415   1.068   1.057   1.068   1.415   1.415   1.415
94    K         1.415   1.415   1.415   1.259   1.250   1.259   1.415   1.415   1.415
95    L        -0.704  -0.704  -0.704  -0.676  -0.675  -0.676  -0.704  -0.704  -0.704
96    S        -0.704  -0.704  -0.704  -0.846  -0.856  -0.846  -0.704  -0.704  -0.704
97    S        -0.704  -0.704  -0.704  -0.846  -0.856  -0.846  -0.704  -0.704  -0.704
98    K        -0.704  -0.704  -0.704  -0.947  -0.949  -0.947  -0.704  -0.704  -0.704
99    D        -0.704  -0.704  -0.704  -0.813  -0.814  -0.813  -0.704  -0.704  -0.704
100   A        -0.704  -0.704  -0.704  -0.589  -0.596  -0.589  -0.704  -0.704  -0.704
101   F        -0.704  -0.704  -0.704  -0.383  -0.379  -0.383  -0.704  -0.704  -0.704
102   I        -0.704  -0.704  -0.704  -0.369  -0.357  -0.369  -0.704  -0.704  -0.704
103   D         1.415   1.415   1.415   1.368   1.373   1.368   1.415   1.415   1.415
104   D        -0.704  -0.704  -0.704  -0.955  -0.958  -0.955  -0.704  -0.704  -0.704
105   L        -0.704  -0.704  -0.704  -0.558  -0.548  -0.558  -0.704  -0.704  -0.704
106   K         1.415   1.415   1.415   1.259   1.250   1.259   1.415   1.415   1.415
107   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
108   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
109   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
110   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
111   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
112   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
113   Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
114   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
115   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
116   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
117   D        -0.704  -0.704  -0.704  -0.772  -0.757  -0.772  -0.704  -0.704  -0.704
118   K        -0.704  -0.704  -0.704  -0.797  -0.798  -0.797  -0.704  -0.704  -0.704
119   H        -0.704  -0.704  -0.704  -0.413  -0.417  -0.413  -0.704  -0.704  -0.704
120   N         1.415   1.415   1.415   1.314   1.328   1.314   1.415   1.415   1.415
121   K        -0.704  -0.704  -0.704  -1.041  -1.054  -1.041  -0.704  -0.704  -0.704
122   E        -0.704  -0.704  -0.704  -0.938  -0.941  -0.938  -0.704  -0.704  -0.704
123   R        -0.704  -0.704  -0.704  -0.955  -0.967  -0.955  -0.704  -0.704  -0.704
124   T        -0.704  -0.704  -0.704  -0.896  -0.907  -0.896  -0.704  -0.704  -0.704
125   P        -0.704  -0.704  -0.704  -0.684  -0.691  -0.684  -0.704  -0.704  -0.704
126   S        -0.704  -0.704  -0.704  -0.621  -0.627  -0.621  -0.704  -0.704  -0.704
127   T        -0.704  -0.704  -0.704  -0.489  -0.479  -0.489  -0.704  -0.704  -0.704
128   G        -0.704  -0.704  -0.704  -0.543  -0.548  -0.543  -0.704  -0.704  -0.704
129   R        -0.704  -0.704  -0.704  -0.676  -0.683  -0.676  -0.704  -0.704  -0.704
130   D        -0.704  -0.704  -0.704  -0.474  -0.471  -0.474  -0.704  -0.704  -0.704
131   E        -0.704  -0.704  -0.704  -0.459  -0.455  -0.459  -0.704  -0.704  -0.704
132   Q        -0.704  -0.704  -0.704  -0.629  -0.635  -0.629  -0.704  -0.704  -0.704
133   Q         1.415   1.415   1.415   1.508   1.503   1.508   1.415   1.415   1.415
134   R        -0.704  -0.704  -0.704  -0.676  -0.683  -0.676  -0.704  -0.704  -0.704
135   N        -0.704  -0.704  -0.704  -0.772  -0.765  -0.772  -0.704  -0.704  -0.704
136   S         1.415   1.415   1.415   1.068   1.057   1.068   1.415   1.415   1.415
137   K        -0.704  -0.704  -0.704  -0.621  -0.627  -0.621  -0.704  -0.704  -0.704
138   A         1.415   1.415   1.415   1.666   1.663   1.666   1.415   1.415   1.415
139   A        -0.704  -0.704  -0.704  -0.229  -0.231  -0.229  -0.704  -0.704  -0.704
140   H        -0.704  -0.704  -0.704  -0.361  -0.364  -0.361  -0.704  -0.704  -0.704
141   T        -0.704  -0.704  -0.704  -0.574  -0.580  -0.574  -0.704  -0.704  -0.704
142   S        -0.704  -0.704  -0.704  -0.756  -0.765  -0.756  -0.704  -0.704  -0.704
143   K         1.415   1.415   1.415   1.259   1.250   1.259   1.415   1.415   1.415
144   P        -0.704  -0.704  -0.704  -0.474  -0.471  -0.474  -0.704  -0.704  -0.704
145   T         1.415   1.415   1.415   1.444   1.438   1.444   1.415   1.415   1.415
146   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
147   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
148   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
149   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
150   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
151   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
152   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
153   I        -0.704  -0.704  -0.704  -0.266  -0.260  -0.266  -0.704  -0.704  -0.704
154   H         1.415   1.415   1.415   1.800   1.798   1.800   1.415   1.415   1.415
155   L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
156   L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
157   S         1.415   1.415   1.415   1.068   1.057   1.068   1.415   1.415   1.415
158   P         1.415   1.415   1.415   1.718   1.715   1.718   1.415   1.415   1.415
159   I         1.415   1.415   1.415   1.614   1.610   1.614   1.415   1.415   1.415
160   V         1.415   1.415   1.415   1.624   1.642   1.624   1.415   1.415   1.415
161   N        -0.704  -0.704  -0.704  -0.582  -0.572  -0.582  -0.704  -0.704  -0.704
162   R        -0.704  -0.704  -0.704  -0.772  -0.765  -0.772  -0.704  -0.704  -0.704
163   D        -0.704  -0.704  -0.704  -0.543  -0.525  -0.543  -0.704  -0.704  -0.704
164   K        -0.704  -0.704  -0.704  -0.855  -0.848  -0.855  -0.704  -0.704  -0.704
165   P         1.415   1.415   1.415   1.718   1.715   1.718   1.415   1.415   1.415
166   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
167   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
168   Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
169   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
170   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
171   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
172   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
173   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
174   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
175   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
176   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
177   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
178   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
179   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
180   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
181   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
182   S        -0.704  -0.704  -0.704  -0.756  -0.765  -0.756  -0.704  -0.704  -0.704
183   Q        -0.704  -0.704  -0.704  -0.708  -0.716  -0.708  -0.704  -0.704  -0.704
184   R        -0.704  -0.704  -0.704  -0.716  -0.716  -0.716  -0.704  -0.704  -0.704
185   R        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
186   S        -0.704  -0.704  -0.704  -0.724  -0.732  -0.724  -0.704  -0.704  -0.704
187   R        -0.704  -0.704  -0.704  -0.543  -0.548  -0.543  -0.704  -0.704  -0.704
188   G         1.415   1.415   1.415   1.624   1.621   1.624   1.415   1.415   1.415
189   L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
190   R        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
191   S        -0.704  -0.704  -0.704  -0.938  -0.941  -0.938  -0.704  -0.704  -0.704
192   L        -0.704  -0.704  -0.704  -0.805  -0.806  -0.805  -0.704  -0.704  -0.704
193   L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
194   S        -0.704  -0.704  -0.704  -1.041  -1.054  -1.041  -0.704  -0.704  -0.704
195   S        -0.704  -0.704  -0.704  -0.756  -0.748  -0.756  -0.704  -0.704  -0.704
196   G         1.415   1.415   1.415   1.624   1.621   1.624   1.415   1.415   1.415
197   K        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
198   N         1.415   1.415   1.415   1.314   1.328   1.314   1.415   1.415   1.415
199   T         1.415   1.415   1.415   1.444   1.438   1.444   1.415   1.415   1.415
200   I         1.415   1.415   1.415   1.614   1.610   1.614   1.415   1.415   1.415
201   F         1.415   1.415   1.415   1.769   1.778   1.769   1.415   1.415   1.415
202   D         1.415   1.415   1.415   1.368   1.373   1.368   1.415   1.415   1.415
203   S        -0.704  -0.704  -0.704  -1.041  -1.054  -1.041  -0.704  -0.704  -0.704
204   I        -0.704  -0.704  -0.704  -0.589  -0.580  -0.589  -0.704  -0.704  -0.704
205   S         1.415   1.415   1.415   1.068   1.057   1.068   1.415   1.415   1.415
206   K        -0.704  -0.704  -0.704  -1.041  -1.054  -1.041  -0.704  -0.704  -0.704
207   N        -0.704  -0.704  -0.704  -0.905  -0.890  -0.905  -0.704  -0.704  -0.704
208   L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
209   D         1.415   1.415   1.415   1.368   1.373   1.368   1.415   1.415   1.415
210   D         1.415   1.415   1.415   1.368   1.373   1.368   1.415   1.415   1.415
211   E        -0.704  -0.704  -0.704  -0.716  -0.708  -0.716  -0.704  -0.704  -0.704
212   I        -0.704  -0.704  -0.704  -0.551  -0.548  -0.551  -0.704  -0.704  -0.704
213   N        -0.704  -0.704  -0.704  -0.772  -0.757  -0.772  -0.704  -0.704  -0.704
214   E        -0.704  -0.704  -0.704  -0.716  -0.708  -0.716  -0.704  -0.704  -0.704
215   N        -0.704  -0.704  -0.704  -0.772  -0.757  -0.772  -0.704  -0.704  -0.704
216   A        -0.704  -0.704  -0.704  -0.512  -0.509  -0.512  -0.704  -0.704  -0.704
217   H        -0.704  -0.704  -0.704  -0.413  -0.410  -0.413  -0.704  -0.704  -0.704
218   I        -0.704  -0.704  -0.704  -0.535  -0.533  -0.535  -0.704  -0.704  -0.704
219   R        -0.704  -0.704  -0.704  -0.551  -0.556  -0.551  -0.704  -0.704  -0.704
220   N         1.415   1.415   1.415   1.314   1.328   1.314   1.415   1.415   1.415
221   D        -0.704  -0.704  -0.704  -0.543  -0.541  -0.543  -0.704  -0.704  -0.704
222   T         1.415   1.415   1.415   1.444   1.438   1.444   1.415   1.415   1.415
223   T        -0.704  -0.704  -0.704  -0.896  -0.907  -0.896  -0.704  -0.704  -0.704
224   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
225   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
226   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
227   S        -0.704  -0.704  -0.704  -0.955  -0.967  -0.955  -0.704  -0.704  -0.704
228   S         1.415   1.415   1.415   1.068   1.057   1.068   1.415   1.415   1.415
229   K        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
230   I        -0.704  -0.704  -0.704  -0.369  -0.357  -0.369  -0.704  -0.704  -0.704
231   A        -0.704  -0.704  -0.704  -0.459  -0.463  -0.459  -0.704  -0.704  -0.704
232   G         1.415   1.415   1.415   1.624   1.621   1.624   1.415   1.415   1.415
233   K        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
234   S        -0.704  -0.704  -0.704  -1.041  -1.054  -1.041  -0.704  -0.704  -0.704
235   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
236   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
237   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
238   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
239   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
240   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
241   L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
242   Q        -0.704  -0.704  -0.704  -0.629  -0.635  -0.629  -0.704  -0.704  -0.704
243   K        -0.704  -0.704  -0.704  -1.041  -1.054  -1.041  -0.704  -0.704  -0.704
244   S         1.415   1.415   1.415   1.068   1.057   1.068   1.415   1.415   1.415
245   P        -0.704  -0.704  -0.704  -0.684  -0.691  -0.684  -0.704  -0.704  -0.704
246   E        -0.704  -0.704  -0.704  -0.938  -0.941  -0.938  -0.704  -0.704  -0.704
247   L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
248   R        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
249   K        -0.704  -0.704  -0.704  -0.813  -0.814  -0.813  -0.704  -0.704  -0.704
250   E        -0.704  -0.704  -0.704  -0.938  -0.941  -0.938  -0.704  -0.704  -0.704
251   R        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
252   N         1.415   1.415   1.415   1.314   1.328   1.314   1.415   1.415   1.415
253   N         1.415   1.415   1.415   1.314   1.328   1.314   1.415   1.415   1.415
254   M        -0.704  -0.704  -0.704  -0.108  -0.108  -0.108  -0.704  -0.704  -0.704
255   I         1.415   1.415   1.415   1.614   1.610   1.614   1.415   1.415   1.415
256   L        -0.704  -0.704  -0.704  -0.846  -0.839  -0.846  -0.704  -0.704  -0.704
257   K        -0.704  -0.704  -0.704  -0.797  -0.798  -0.797  -0.704  -0.704  -0.704
258   E         1.415   1.415   1.415   1.390   1.394   1.390   1.415   1.415   1.415
259   H        -0.704  -0.704  -0.704  -0.398  -0.395  -0.398  -0.704  -0.704  -0.704
260   I        -0.704  -0.704  -0.704  -0.339  -0.342  -0.339  -0.704  -0.704  -0.704
261   L        -0.704  -0.704  -0.704  -0.527  -0.525  -0.527  -0.704  -0.704  -0.704
262   R        -0.704  -0.704  -0.704  -0.716  -0.716  -0.716  -0.704  -0.704  -0.704
263   S        -0.704  -0.704  -0.704  -0.644  -0.643  -0.644  -0.704  -0.704  -0.704
264   K        -0.704  -0.704  -0.704  -0.756  -0.765  -0.756  -0.704  -0.704  -0.704
265   D        -0.704  -0.704  -0.704  -0.676  -0.675  -0.676  -0.704  -0.704  -0.704
266   D         1.415   1.415   1.415   1.368   1.373   1.368   1.415   1.415   1.415
267   Q        -0.704  -0.704  -0.704  -0.668  -0.659  -0.668  -0.704  -0.704  -0.704
268   N        -0.704  -0.704  -0.704  -0.998  -0.992  -0.998  -0.704  -0.704  -0.704
269   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
270   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
271   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
272   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
273   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
274   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
275   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
276   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
277   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
278   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
279   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
280   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
281   S        -0.704  -0.704  -0.704  -0.955  -0.958  -0.955  -0.704  -0.704  -0.704
282   S        -0.704  -0.704  -0.704  -0.938  -0.941  -0.938  -0.704  -0.704  -0.704
283   I        -0.704  -0.704  -0.704  -0.369  -0.357  -0.369  -0.704  -0.704  -0.704
284   G         1.415   1.415   1.415   1.624   1.621   1.624   1.415   1.415   1.415
285   D        -0.704  -0.704  -0.704  -0.863  -0.856  -0.863  -0.704  -0.704  -0.704
286   S        -0.704  -0.704  -0.704  -0.613  -0.619  -0.613  -0.704  -0.704  -0.704
287   T        -0.704  -0.704  -0.704  -0.660  -0.659  -0.660  -0.704  -0.704  -0.704
288   A        -0.704  -0.704  -0.704  -0.332  -0.334  -0.332  -0.704  -0.704  -0.704
289   M        -0.704  -0.704  -0.704  -0.527  -0.525  -0.527  -0.704  -0.704  -0.704
290   T        -0.704  -0.704  -0.704  -0.756  -0.765  -0.756  -0.704  -0.704  -0.704
291   S        -0.704  -0.704  -0.704  -1.093  -1.098  -1.093  -0.704  -0.704  -0.704
292   R         1.415   1.415   1.415   1.368   1.362   1.368   1.415   1.415   1.415
293   S        -0.704  -0.704  -0.704  -0.955  -0.958  -0.955  -0.704  -0.704  -0.704
294   S        -0.704  -0.704  -0.704  -0.756  -0.765  -0.756  -0.704  -0.704  -0.704
295   T        -0.704  -0.704  -0.704  -0.896  -0.907  -0.896  -0.704  -0.704  -0.704
296   V        -0.704  -0.704  -0.704  -0.332  -0.320  -0.332  -0.704  -0.704  -0.704
297   N        -0.704  -0.704  -0.704  -0.855  -0.848  -0.855  -0.704  -0.704  -0.704
298   A         1.415   1.415   1.415   1.666   1.663   1.666   1.415   1.415   1.415
299   N         1.415   1.415   1.415   1.314   1.328   1.314   1.415   1.415   1.415
300   D        -0.704  -0.704  -0.704  -0.863  -0.856  -0.863  -0.704  -0.704  -0.704
301   I        -0.704  -0.704  -0.704  -0.451  -0.455  -0.451  -0.704  -0.704  -0.704
302   L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
303   G        -0.704  -0.704  -0.704  -0.295  -0.297  -0.295  -0.704  -0.704  -0.704
304   N        -0.704  -0.704  -0.704  -0.998  -0.992  -0.998  -0.704  -0.704  -0.704
305   E        -0.704  -0.704  -0.704  -0.527  -0.525  -0.527  -0.704  -0.704  -0.704
306   E        -0.704  -0.704  -0.704  -0.938  -0.941  -0.938  -0.704  -0.704  -0.704
307   N        -0.704  -0.704  -0.704  -0.905  -0.890  -0.905  -0.704  -0.704  -0.704
308   D        -0.704  -0.704  -0.704  -0.955  -0.958  -0.955  -0.704  -0.704  -0.704
309   G        -0.704  -0.704  -0.704  -0.295  -0.297  -0.295  -0.704  -0.704  -0.704
310   I        -0.704  -0.704  -0.704  -0.551  -0.548  -0.551  -0.704  -0.704  -0.704
311   T        -0.704  -0.704  -0.704  -0.660  -0.659  -0.660  -0.704  -0.704  -0.704
312   K        -0.704  -0.704  -0.704  -0.813  -0.814  -0.813  -0.704  -0.704  -0.704
313   L        -0.704  -0.704  -0.704  -0.805  -0.806  -0.805  -0.704  -0.704  -0.704
314   K        -0.704  -0.704  -0.704  -0.708  -0.716  -0.708  -0.704  -0.704  -0.704
315   R        -0.704  -0.704  -0.704  -0.955  -0.967  -0.955  -0.704  -0.704  -0.704
316   V        -0.704  -0.704  -0.704  -0.756  -0.748  -0.756  -0.704  -0.704  -0.704
317   N         1.415   1.415   1.415   1.314   1.328   1.314   1.415   1.415   1.415
318   K        -0.704  -0.704  -0.704  -0.797  -0.798  -0.797  -0.704  -0.704  -0.704
319   L        -0.704  -0.704  -0.704  -0.846  -0.839  -0.846  -0.704  -0.704  -0.704
320   T         1.415   1.415   1.415   1.444   1.438   1.444   1.415   1.415   1.415
321   S        -0.704  -0.704  -0.704  -0.896  -0.907  -0.896  -0.704  -0.704  -0.704
322   S        -0.704  -0.704  -0.704  -0.998  -0.992  -0.998  -0.704  -0.704  -0.704
323   P        -0.704  -0.704  -0.704  -0.421  -0.425  -0.421  -0.704  -0.704  -0.704
324   V        -0.704  -0.704  -0.704  -0.543  -0.533  -0.543  -0.704  -0.704  -0.704
325   K         1.415   1.415   1.415   1.259   1.250   1.259   1.415   1.415   1.415
326   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
327   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
328   C        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
329   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
330   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
331   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
332   K         1.415   1.415   1.415   1.259   1.250   1.259   1.415   1.415   1.415
333   K        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
334   R         1.415   1.415   1.415   1.368   1.362   1.368   1.415   1.415   1.415
335   K        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
336   L         1.415   1.415   1.415   1.192   1.194   1.192   1.415   1.415   1.415
337   T         1.415   1.415   1.415   1.444   1.438   1.444   1.415   1.415   1.415
338   K        -0.704  -0.704  -0.704  -0.813  -0.823  -0.813  -0.704  -0.704  -0.704
339   Q        -0.704  -0.704  -0.704  -0.629  -0.635  -0.629  -0.704  -0.704  -0.704
340   R         1.415   1.415   1.415   1.368   1.362   1.368   1.415   1.415   1.415
341   I         1.415   1.415   1.415   1.614   1.610   1.614   1.415   1.415   1.415
342   A        -0.704  -0.704  -0.704  -0.413  -0.417  -0.413  -0.704  -0.704  -0.704
343   T         1.415   1.415   1.415   1.444   1.438   1.444   1.415   1.415   1.415
344   L        -0.704  -0.704  -0.704  -0.527  -0.525  -0.527  -0.704  -0.704  -0.704
345   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
346   N         1.415   1.415   1.415   1.314   1.328   1.314   1.415   1.415   1.415
347   S         1.415   1.415   1.415   1.068   1.057   1.068   1.415   1.415   1.415
348   D         1.415   1.415   1.415   1.368   1.373   1.368   1.415   1.415   1.415
349   E        -0.704  -0.704  -0.704  -0.756  -0.740  -0.756  -0.704  -0.704  -0.704
350   E        -0.704  -0.704  -0.704  -0.938  -0.941  -0.938  -0.704  -0.704  -0.704
351   L        -0.704  -0.704  -0.704  -1.093  -1.098  -1.093  -0.704  -0.704  -0.704
352   S         1.415   1.415   1.415   1.068   1.057   1.068   1.415   1.415   1.415
353   N        -0.704  -0.704  -0.704  -0.756  -0.740  -0.756  -0.704  -0.704  -0.704
354   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
355   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
356   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
357   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
358   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
359   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
360   F        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
361   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q04087
Output conservation file - output/Q04087
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
