1     M         1.858   1.928   2.047   2.182   2.297   2.472   2.047   2.152   2.362
2     A         0.271   0.178   0.063   0.453   0.257   0.106   0.230   0.078  -0.097
3     V        -1.231  -1.201  -1.109  -0.827  -0.830  -0.636  -1.092  -1.044  -0.909
4     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
9     H        -0.618  -0.629  -0.627  -0.833  -0.840  -0.753  -0.652  -0.674  -0.646
10    T        -1.120  -1.172  -1.066  -0.910  -0.981  -0.901  -0.989  -1.011  -0.870
11    N         1.107   1.021   0.939   1.396   1.342   1.228   1.162   1.014   0.830
12    R         1.107   1.014   0.945   1.227   1.119   1.048   1.162   1.001   0.841
13    Q        -0.559  -0.702  -0.609  -0.596  -0.740  -0.562  -0.610  -0.748  -0.635
14    I         0.392   0.175   0.099   0.718   0.414   0.215   0.403   0.092  -0.043
15    L         1.107   1.021   0.939   1.222   1.111   0.919   1.162   1.014   0.830
16    T         1.107   1.021   0.939   1.382   1.297   1.182   1.162   1.014   0.830
17    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
18    R         0.737   0.902   0.833   0.892   1.156   1.009   0.529   0.807   0.626
19    G         0.392   0.256   0.118   0.791   0.637   0.395   0.403   0.209  -0.014
20    K        -0.281  -0.518  -0.556  -0.614  -0.980  -1.042  -0.230  -0.517  -0.561
21    N        -1.250  -1.296  -1.115  -1.156  -1.111  -0.900  -1.116  -1.119  -0.916
22    Y         1.107   1.021   0.939   1.513   1.443   1.340   1.162   1.014   0.830
23    A        -0.905  -0.973  -1.019  -0.519  -0.592  -0.709  -0.736  -0.803  -0.818
24    T        -0.774  -0.800  -0.662  -0.878  -1.002  -0.792  -0.863  -0.864  -0.693
25    K         1.107   1.232   0.961   0.709   0.877   0.556   1.162   1.352   0.872
26    Q        -0.644  -0.623  -0.594  -0.894  -0.919  -0.833  -0.736  -0.688  -0.620
27    S        -1.465  -1.519  -1.452  -1.077  -1.211  -1.096  -1.116  -1.147  -1.036
28    K         0.392   0.256   0.118   0.123  -0.021  -0.176   0.403   0.209  -0.014
29    K         0.392   0.256   0.118   0.113  -0.031  -0.195   0.403   0.209  -0.014
30    F        -0.559  -0.589  -0.594  -0.029  -0.061  -0.046  -0.610  -0.643  -0.620
31    G        -0.281  -0.424  -0.524   0.096  -0.149  -0.359  -0.230  -0.408  -0.521
32    T        -0.559  -0.490  -0.563  -0.235  -0.122  -0.225  -0.610  -0.507  -0.576
33    D         0.737   0.643   0.720   0.532   0.311   0.377   0.529   0.322   0.400
34    E         1.858   1.928   2.047   1.525   1.611   1.811   2.047   2.152   2.362
35    V         0.737   0.643   0.720   0.910   0.765   0.855   0.529   0.322   0.400
36    T        -0.774  -0.703  -0.655  -0.653  -0.536  -0.525  -0.863  -0.777  -0.688
37    F         1.107   1.107   0.954   1.483   1.522   1.329   1.162   1.155   0.859
38    D         1.858   1.928   2.047   1.777   1.888   2.065   2.047   2.152   2.362
39    K         1.107   1.107   0.954   0.702   0.721   0.532   1.162   1.155   0.859
40    D         0.064   0.017   0.002  -0.064  -0.158  -0.219  -0.104  -0.172  -0.205
41    S        -0.281  -0.518  -0.556   0.035  -0.339  -0.450  -0.230  -0.517  -0.561
42    R         1.858   1.928   2.047   1.836   1.927   2.124   2.047   2.152   2.362
43    L        -1.120  -1.099  -1.088  -1.010  -1.074  -0.975  -0.989  -0.960  -0.892
44    D         0.737   0.902   0.833   0.364   0.597   0.485   0.529   0.807   0.626
45    Y         1.107   1.240   0.967   1.505   1.690   1.364   1.162   1.364   0.883
46    L         1.858   1.928   2.047   1.923   2.039   2.212   2.047   2.152   2.362
47    T         1.858   1.928   2.047   1.998   2.108   2.286   2.047   2.152   2.362
48    G         1.858   1.928   2.047   2.046   2.165   2.335   2.047   2.152   2.362
49    F         1.858   1.928   2.047   2.079   2.199   2.369   2.047   2.152   2.362
50    H         1.107   1.107   0.954   1.529   1.550   1.330   1.162   1.155   0.859
51    K         1.858   1.928   2.047   1.327   1.432   1.612   2.047   2.152   2.362
52    R         1.858   1.928   2.047   1.836   1.927   2.124   2.047   2.152   2.362
53    K         1.858   1.928   2.047   1.327   1.432   1.612   2.047   2.152   2.362
54    L         0.064  -0.046  -0.013   0.261   0.131   0.156  -0.104  -0.252  -0.227
55    Q        -0.281  -0.416  -0.520   0.024  -0.185  -0.398  -0.230  -0.398  -0.516
56    R         1.858   1.928   2.047   1.836   1.927   2.124   2.047   2.152   2.362
57    Q        -0.281  -0.518  -0.556   0.026  -0.308  -0.463  -0.230  -0.517  -0.561
58    K         1.107   1.107   0.954   0.641   0.648   0.397   1.162   1.155   0.859
59    K         0.392   0.175   0.099   0.138  -0.101  -0.167   0.403   0.092  -0.043
60    A         1.858   1.928   2.047   1.912   2.014   2.200   2.047   2.152   2.362
61    Q         0.737   0.746   0.732   0.647   0.648   0.469   0.529   0.521   0.424
62    E        -0.281  -0.403  -0.515  -0.312  -0.477  -0.609  -0.230  -0.385  -0.510
63    F        -0.559  -0.576  -0.611  -0.243  -0.317  -0.385  -0.610  -0.645  -0.638
64    I        -1.250  -1.205  -1.110  -0.768  -0.721  -0.568  -1.116  -1.047  -0.912
65    K         0.064   0.051  -0.013  -0.515  -0.620  -0.649  -0.104  -0.169  -0.227
66    E         1.107   1.014   0.945   0.908   0.797   0.729   1.162   1.001   0.841
67    Q         1.107   1.021   0.939   1.277   1.178   1.006   1.162   1.014   0.830
68    E        -0.559  -0.616  -0.612  -0.866  -1.009  -0.991  -0.610  -0.682  -0.639
69    R         1.858   1.928   2.047   1.836   1.927   2.124   2.047   2.152   2.362
70    L         0.392   0.371   0.146   0.535   0.506   0.058   0.403   0.365   0.027
71    R        -1.120  -1.048  -1.076  -1.078  -1.093  -1.062  -0.989  -0.914  -0.882
72    K         0.540   0.671   0.725   0.078   0.335   0.337   0.150   0.377   0.409
73    I         0.737   0.741   0.742   0.914   0.927   0.871   0.529   0.512   0.444
74    E         0.064  -0.088  -0.036  -0.174  -0.403  -0.291  -0.104  -0.322  -0.261
75    E         0.737   0.643   0.720   0.415   0.255   0.379   0.529   0.322   0.400
76    R         1.858   1.928   2.047   1.836   1.927   2.124   2.047   2.152   2.362
77    Q         0.392   0.617   0.173   0.097   0.381  -0.156   0.403   0.724   0.069
78    K         0.064  -0.051  -0.017  -0.324  -0.446  -0.362  -0.104  -0.259  -0.234
79    I        -0.084   0.008  -0.024   0.115   0.220   0.239  -0.357  -0.255  -0.254
80    R         1.107   1.232   0.961   1.134   1.297   0.874   1.162   1.352   0.872
81    Q        -0.774  -0.693  -0.650  -0.928  -0.894  -0.762  -0.863  -0.769  -0.682
82    E         0.392   0.371   0.146   0.274   0.246  -0.047   0.403   0.365   0.027
83    R         0.737   0.892   0.791   0.530   0.781   0.511   0.529   0.789   0.543
84    K         0.392   0.368   0.133   0.024   0.013  -0.358   0.403   0.362   0.008
85    E        -1.120  -1.033  -1.044  -1.435  -1.298  -1.288  -0.989  -0.895  -0.852
86    V        -1.465  -1.445  -1.439  -1.177  -1.192  -1.149  -1.116  -1.084  -1.025
87    M        -0.559  -0.415  -0.539  -0.197   0.011  -0.126  -0.610  -0.413  -0.550
88    E         0.392   0.361   0.143   0.298   0.249  -0.002   0.403   0.352   0.024
89    E        -0.559  -0.401  -0.558  -0.937  -0.740  -0.937  -0.610  -0.417  -0.576
90    Q        -0.281  -0.518  -0.556   0.086  -0.232  -0.345  -0.230  -0.517  -0.561
91    L         0.392   0.256   0.118   0.699   0.550   0.340   0.403   0.209  -0.014
92    K        -0.774  -0.734  -0.664  -1.191  -1.047  -0.968  -0.863  -0.817  -0.698
93    T        -1.250  -1.231  -1.102  -0.965  -0.904  -0.744  -1.116  -1.072  -0.907
94    F        -0.281  -0.518  -0.556   0.320   0.032  -0.026  -0.230  -0.517  -0.561
95    K        -0.281  -0.331  -0.502  -0.419  -0.446  -0.608  -0.230  -0.291  -0.494
96    E        -0.644  -0.515  -0.573  -1.214  -1.088  -1.061  -0.736  -0.592  -0.602
97    S        -1.250  -1.116  -1.103  -1.097  -0.900  -0.922  -1.116  -0.977  -0.907
98    L        -1.120  -1.077  -1.060  -0.626  -0.552  -0.513  -0.989  -0.931  -0.867
99    N        -1.465  -1.451  -1.431  -1.447  -1.368  -1.298  -1.116  -1.089  -1.017
100   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
101   E         0.064  -0.008   0.003  -0.204  -0.301  -0.281  -0.104  -0.189  -0.203
102   A        -0.774  -0.722  -0.657  -0.525  -0.462  -0.363  -0.863  -0.801  -0.691
103   E         0.129   0.275   0.056   0.003   0.188  -0.087   0.023   0.238  -0.109
104   -        -0.797  -0.657  -0.654  -0.740  -0.550  -0.552  -0.868  -0.687  -0.678
105   -        -0.797  -0.657  -0.654  -0.535  -0.349  -0.323  -0.868  -0.687  -0.678
106   -        -0.792  -0.751  -0.654  -0.559  -0.481  -0.366  -0.877  -0.813  -0.682
107   -        -1.349  -1.301  -1.153  -0.995  -0.903  -0.723  -1.191  -1.123  -0.948
108   -        -0.036   0.043   0.006   0.077   0.191   0.154  -0.220  -0.106  -0.184
109   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
110   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
111   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
112   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
113   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
114   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
115   I        -0.797  -0.587  -0.650  -0.925  -0.673  -0.697  -0.868  -0.600  -0.673
116   E         0.517   0.571   0.679  -0.297  -0.234  -0.106   0.104   0.180   0.316
117   D        -0.797  -0.740  -0.658  -1.186  -1.054  -1.050  -0.868  -0.796  -0.683
118   A        -0.244  -0.117  -0.094  -0.424  -0.208  -0.259  -0.544  -0.368  -0.337
119   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
120   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
121   D        -0.047  -0.008  -0.036  -0.153  -0.101  -0.178  -0.266  -0.238  -0.261
122   K        -0.836  -0.752  -0.672  -1.024  -0.833  -0.720  -0.927  -0.824  -0.704
123   T        -1.250  -1.216  -1.099  -1.061  -1.069  -0.863  -1.116  -1.062  -0.904
124   E        -0.214  -0.128  -0.080  -0.743  -0.604  -0.655  -0.483  -0.362  -0.315
125   D        -1.231  -1.249  -1.104  -1.206  -1.192  -0.982  -1.092  -1.082  -0.906
126   L        -1.941  -1.792  -1.780  -1.267  -1.063  -1.041  -1.369  -1.228  -1.156
127   Q        -1.120  -0.977  -1.045  -1.117  -0.976  -1.062  -0.989  -0.850  -0.853
128   V        -1.120  -1.075  -1.051  -1.130  -1.107  -1.084  -0.989  -0.936  -0.860
129   E        -0.559  -0.601  -0.595  -0.949  -1.047  -1.025  -0.610  -0.652  -0.620
130   S        -0.299  -0.265  -0.133  -0.669  -0.622  -0.414  -0.610  -0.559  -0.390
131   D        -1.250  -1.230  -1.101  -1.256  -1.231  -1.046  -1.116  -1.071  -0.905
132   E         0.737   0.684   0.731   0.364   0.249   0.311   0.529   0.402   0.423
133   S         1.107   1.279   0.966   0.909   1.106   0.761   1.162   1.422   0.880
134   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
135   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
136   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
137   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
138   W         1.858   1.928   2.047   2.206   2.321   2.495   2.047   2.152   2.362
139   H        -1.713  -1.626  -1.516  -1.394  -1.311  -1.124  -1.326  -1.229  -1.086
140   G         1.858   1.928   2.047   2.036   2.156   2.324   2.047   2.152   2.362
141   F         0.960   0.766   0.822   1.249   0.983   1.030   0.923   0.559   0.605
142   D        -1.231  -1.139  -1.093  -1.024  -0.904  -0.849  -1.092  -0.986  -0.896
143   S        -0.292  -0.151  -0.089  -0.639  -0.463  -0.360  -0.597  -0.391  -0.326
144   D         1.858   1.928   2.047   1.778   1.886   2.066   2.047   2.152   2.362
145   K        -1.231  -1.189  -1.102  -1.430  -1.379  -1.298  -1.092  -1.036  -0.904
146   D        -0.687  -0.738  -0.641  -0.775  -0.855  -0.696  -0.762  -0.806  -0.670
147   D        -1.625  -1.606  -1.497  -1.457  -1.497  -1.284  -1.258  -1.219  -1.072
148   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
149   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
150   -        -0.797  -0.715  -0.645  -1.304  -1.161  -1.112  -0.868  -0.757  -0.668
151   -        -0.618  -0.535  -0.580  -0.864  -0.786  -0.837  -0.652  -0.539  -0.590
152   G        -1.625  -1.604  -1.487  -1.428  -1.391  -1.295  -1.258  -1.218  -1.064
153   D        -0.687  -0.775  -0.639  -0.893  -0.996  -0.779  -0.762  -0.831  -0.666
154   N        -1.082  -1.114  -1.085  -1.300  -1.393  -1.353  -0.927  -0.954  -0.885
155   D         0.271   0.285   0.086   0.294   0.296  -0.042   0.230   0.248  -0.062
156   N        -1.082  -1.032  -1.059  -0.774  -0.684  -0.797  -0.927  -0.870  -0.858
157   N        -0.687  -0.775  -0.639  -0.677  -0.837  -0.623  -0.762  -0.831  -0.666
158   E         0.540   0.621   0.698   0.137   0.233   0.372   0.150   0.279   0.354
159   S        -0.905  -0.913  -1.004  -0.520  -0.572  -0.715  -0.736  -0.734  -0.803
160   S        -0.687  -0.559  -0.613  -0.525  -0.375  -0.413  -0.762  -0.614  -0.639
161   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
162   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
163   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
164   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
165   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
166   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
167   V        -1.082  -1.142  -1.105  -0.428  -0.467  -0.405  -0.927  -0.980  -0.904
168   K         0.666   0.580   0.690  -0.057  -0.258  -0.104   0.395   0.199   0.337
169   P         0.497   0.553   0.675   0.637   0.722   0.887   0.064   0.144   0.306
170   I         1.041   0.879   0.882   1.242   0.987   0.914   1.056   0.766   0.722
171   L         0.271   0.042   0.027   0.517   0.210   0.150   0.230  -0.108  -0.153
172   K        -0.441  -0.461  -0.570  -0.606  -0.617  -0.670  -0.431  -0.463  -0.578
173   K        -0.687  -0.793  -0.661  -0.883  -1.038  -0.764  -0.762  -0.852  -0.690
174   G        -0.797  -0.693  -0.658  -0.739  -0.542  -0.586  -0.868  -0.730  -0.683
175   A        -0.244  -0.264  -0.116  -0.438  -0.451  -0.242  -0.544  -0.559  -0.368
176   I        -0.792  -0.804  -0.666  -0.463  -0.470  -0.275  -0.877  -0.871  -0.696
177   T        -1.252  -1.208  -1.131  -0.980  -1.029  -0.867  -1.102  -1.042  -0.928
178   E        -0.618  -0.448  -0.615  -1.059  -0.821  -1.040  -0.652  -0.427  -0.632
179   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
180   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
181   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
182   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
183   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
184   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
185   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
186   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
187   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
188   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
189   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
190   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
191   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
192   I        -0.644  -0.483  -0.589  -0.327  -0.075  -0.253  -0.736  -0.541  -0.616
193   Y        -0.644  -0.710  -0.611  -0.274  -0.343  -0.218  -0.736  -0.773  -0.637
194   D        -0.281  -0.242  -0.472  -0.113  -0.091  -0.409  -0.230  -0.181  -0.456
195   D         0.392   0.256   0.118   0.504   0.324   0.103   0.403   0.209  -0.014
196   S        -1.120  -0.966  -1.030  -1.099  -0.843  -0.921  -0.989  -0.807  -0.834
197   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
198   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
199   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
200   T         1.107   1.014   0.945   1.298   1.170   1.006   1.162   1.001   0.841
201   T         0.392   0.369   0.148   0.818   0.813   0.541   0.403   0.362   0.030
202   V         1.858   1.928   2.047   1.998   2.110   2.286   2.047   2.152   2.362
203   E        -0.559  -0.337  -0.538  -0.433  -0.062  -0.392  -0.610  -0.316  -0.543
204   L        -0.084   0.059  -0.016   0.099   0.297   0.220  -0.357  -0.174  -0.240
205   E         1.858   1.928   2.047   1.525   1.611   1.811   2.047   2.152   2.362
206   T        -1.250  -1.210  -1.114  -0.830  -0.777  -0.607  -1.116  -1.051  -0.915
207   L        -0.084   0.007  -0.036   0.038   0.159   0.152  -0.357  -0.257  -0.267
208   E        -0.214  -0.178  -0.101  -0.563  -0.513  -0.383  -0.483  -0.438  -0.344
209   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
210   P         0.540   0.532   0.669   0.582   0.496   0.687   0.150   0.101   0.294
211   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
212   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
213   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
214   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
215   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
216   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
217   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
218   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
219   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
220   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
221   N        -1.465  -1.529  -1.473  -1.234  -1.413  -1.408  -1.116  -1.155  -1.052
222   D         0.540   0.664   0.718   0.126   0.357   0.371   0.150   0.363   0.395
223   N        -0.644  -0.632  -0.605  -0.756  -0.750  -0.811  -0.736  -0.698  -0.630
224   F        -0.299  -0.183  -0.104  -0.465  -0.374  -0.234  -0.610  -0.445  -0.348
225   E        -0.644  -0.523  -0.582  -0.857  -0.711  -0.723  -0.736  -0.600  -0.611
226   Y        -1.082  -1.148  -1.105  -0.507  -0.602  -0.568  -0.927  -0.987  -0.904
227   L        -0.441  -0.591  -0.594  -0.191  -0.467  -0.469  -0.431  -0.619  -0.607
228   A         0.271   0.021   0.027   0.590   0.275   0.283   0.230  -0.136  -0.153
229   Q        -0.687  -0.641  -0.612  -1.129  -1.014  -0.952  -0.762  -0.692  -0.634
230   L        -1.120  -1.058  -1.073  -1.086  -1.126  -1.048  -0.989  -0.922  -0.879
231   N         1.107   1.014   0.945   1.312   1.212   1.051   1.162   1.001   0.841
232   N         1.107   1.014   0.945   1.383   1.318   1.208   1.162   1.001   0.841
233   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
234   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
235   V         0.392   0.175   0.099   0.701   0.406   0.230   0.403   0.092  -0.043
236   K        -0.559  -0.610  -0.582  -0.846  -0.877  -0.819  -0.610  -0.636  -0.599
237   L        -0.281  -0.518  -0.556   0.058  -0.281  -0.369  -0.230  -0.517  -0.561
238   E        -1.120  -1.168  -1.085  -1.462  -1.518  -1.378  -0.989  -1.014  -0.890
239   K        -0.281  -0.418  -0.517  -0.514  -0.699  -0.795  -0.230  -0.401  -0.513
240   A        -0.084  -0.149  -0.036   0.014  -0.059   0.113  -0.357  -0.421  -0.268
241   E        -0.084  -0.130  -0.032  -0.448  -0.496  -0.328  -0.357  -0.390  -0.260
242   K        -0.774  -0.739  -0.634  -1.179  -1.060  -0.906  -0.863  -0.787  -0.661
243   V        -0.644  -0.755  -0.619  -0.285  -0.388  -0.203  -0.736  -0.818  -0.648
244   L         0.392   0.175   0.099   0.728   0.479   0.370   0.403   0.092  -0.043
245   K        -0.644  -0.644  -0.594  -1.120  -1.068  -1.024  -0.736  -0.716  -0.622
246   Q        -0.559  -0.571  -0.583  -0.576  -0.562  -0.715  -0.610  -0.609  -0.604
247   S         0.392   0.175   0.099   0.701   0.407   0.275   0.403   0.092  -0.043
248   I         0.064  -0.088  -0.036   0.334   0.112   0.156  -0.104  -0.322  -0.261
249   N        -1.231  -1.057  -1.099  -1.487  -1.184  -1.300  -1.092  -0.907  -0.901
250   R         0.666   0.584   0.692   0.403   0.135   0.251   0.395   0.206   0.342
251   A         1.041   0.881   0.882   1.098   0.817   0.770   1.056   0.769   0.722
252   T        -0.687  -0.779  -0.647  -0.906  -0.971  -0.760  -0.762  -0.836  -0.673
253   K        -0.158  -0.220  -0.097  -0.623  -0.669  -0.468  -0.427  -0.496  -0.341
254   Y         0.960   0.831   0.822   1.295   1.120   1.076   0.923   0.678   0.605
255   A         1.858   1.928   2.047   1.929   2.030   2.217   2.047   2.152   2.362
256   K         0.477   0.541   0.674  -0.037   0.117   0.292   0.023   0.119   0.305
257   F        -0.618  -0.666  -0.655  -0.150  -0.194  -0.212  -0.652  -0.706  -0.680
258   L        -0.158  -0.220  -0.097   0.067  -0.003   0.176  -0.427  -0.496  -0.341
259   G         1.858   1.928   2.047   2.029   2.139   2.318   2.047   2.152   2.362
260   V         0.590   0.586   0.681   0.740   0.741   0.874   0.248   0.209   0.319
261   -        -0.797  -0.698  -0.658  -0.690  -0.541  -0.510  -0.868  -0.736  -0.683
262   D        -0.774  -0.773  -0.641  -1.461  -1.471  -1.274  -0.863  -0.830  -0.670
263   E        -0.905  -0.784  -0.994  -0.534  -0.342  -0.831  -0.736  -0.595  -0.792
264   K        -1.595  -1.521  -1.451  -1.535  -1.352  -1.298  -1.242  -1.159  -1.038
265   Q        -2.286  -2.222  -2.088  -1.684  -1.654  -1.416  -1.495  -1.423  -1.258
266   K        -0.774  -0.705  -0.650  -0.886  -0.719  -0.634  -0.863  -0.782  -0.681
267   K         0.271   0.248   0.091  -0.186  -0.242  -0.511   0.230   0.191  -0.055
268   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
269   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
270   K         0.392   0.371   0.146   0.112   0.104  -0.162   0.403   0.365   0.027
271   P        -0.905  -0.783  -0.972  -0.961  -0.829  -0.962  -0.736  -0.595  -0.770
272   R        -0.281  -0.321  -0.490  -0.503  -0.548  -0.742  -0.230  -0.280  -0.480
273   V         0.392   0.617   0.173   0.120   0.403  -0.112   0.403   0.724   0.069
274   K         1.107   1.021   0.939   0.690   0.593   0.482   1.162   1.014   0.830
275   K         1.858   1.928   2.047   1.327   1.432   1.612   2.047   2.152   2.362
276   F         1.858   1.928   2.047   2.079   2.199   2.369   2.047   2.152   2.362
277   R         1.107   1.021   0.939   1.227   1.128   1.039   1.162   1.014   0.830
278   Y         1.858   1.928   2.047   2.105   2.221   2.394   2.047   2.152   2.362
279   L         0.737   0.643   0.720   0.677   0.455   0.512   0.529   0.322   0.400
280   T         0.540   0.532   0.669   0.551   0.509   0.709   0.150   0.101   0.294
281   K         0.392   0.256   0.118   0.083  -0.085  -0.257   0.403   0.209  -0.014
282   N        -1.595  -1.638  -1.487  -0.967  -0.954  -0.770  -1.242  -1.244  -1.065
283   E         1.107   1.021   0.939   0.881   0.767   0.660   1.162   1.014   0.830
284   R         1.858   1.928   2.047   1.836   1.927   2.124   2.047   2.152   2.362
285   R        -0.281  -0.518  -0.556  -0.069  -0.406  -0.525  -0.230  -0.517  -0.561
286   I        -1.250  -1.185  -1.098  -1.289  -1.179  -1.056  -1.116  -1.036  -0.903
287   N         0.392   0.175   0.099   0.744   0.492   0.334   0.403   0.092  -0.043
288   Q        -1.465  -1.529  -1.473  -1.047  -1.212  -1.109  -1.116  -1.155  -1.052
289   R         0.392   0.454   0.166   0.628   0.696   0.358   0.403   0.492   0.058
290   K         1.858   1.928   2.047   1.327   1.432   1.612   2.047   2.152   2.362
291   A        -0.084  -0.092  -0.023  -0.358  -0.363  -0.233  -0.357  -0.327  -0.240
292   N        -0.299  -0.279  -0.131  -0.709  -0.707  -0.498  -0.610  -0.576  -0.386
293   -        -0.244  -0.223  -0.096  -0.209  -0.168   0.014  -0.544  -0.505  -0.340
294   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
295   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
296   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
297   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
298   D        -0.905  -0.603  -0.949  -1.032  -0.643  -1.039  -0.736  -0.378  -0.745
299   N        -0.774  -0.766  -0.672  -0.872  -0.973  -0.814  -0.863  -0.833  -0.704
300   K        -0.281  -0.331  -0.502  -0.468  -0.521  -0.694  -0.230  -0.291  -0.494
301   R        -0.644  -0.636  -0.602  -0.895  -0.907  -0.787  -0.736  -0.702  -0.627
302   R         0.540   0.617   0.700   0.078   0.204   0.263   0.150   0.272   0.359
303   R        -0.559  -0.675  -0.607  -1.009  -1.170  -1.045  -0.610  -0.726  -0.633
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q04031
Output conservation file - output/Q04031
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
