1     M         1.503   1.503   1.503   1.741   1.740   1.741   1.503   1.503   1.503
2     Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
3     N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
9     P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
10    D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
11    M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
12    Y        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
13    N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
14    Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
15    G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
16    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
17    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
18    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
19    M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
20    A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
21    T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
22    Y        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
23    N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
24    A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
25    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
26    E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
27    K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
28    N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
29    L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
30    N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
31    E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
32    H        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
33    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
34    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
35    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
36    Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
37    I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
38    A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
39    Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
40    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
41    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
42    T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
43    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
44    Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
45    K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
46    L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
47    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
48    Y        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
49    R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
50    I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
51    N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
52    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
53    T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
54    T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
55    T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
56    N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
57    G         1.503   1.503   1.503   1.762   1.761   1.762   1.503   1.503   1.503
58    D        -0.663  -0.663  -0.663  -0.647  -0.643  -0.647  -0.663  -0.663  -0.663
59    T        -0.663  -0.663  -0.663  -0.392  -0.387  -0.392  -0.663  -0.663  -0.663
60    D        -0.663  -0.663  -0.663  -0.697  -0.693  -0.697  -0.663  -0.663  -0.663
61    I        -0.663  -0.663  -0.663  -0.534  -0.537  -0.534  -0.663  -0.663  -0.663
62    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
63    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
64    S         1.503   1.503   1.503   1.247   1.254   1.247   1.503   1.503   1.503
65    V        -0.663  -0.663  -0.663  -0.462  -0.465  -0.462  -0.663  -0.663  -0.663
66    N        -0.663  -0.663  -0.663  -0.780  -0.777  -0.780  -0.663  -0.663  -0.663
67    S         1.503   1.503   1.503   1.247   1.254   1.247   1.503   1.503   1.503
68    N        -0.663  -0.663  -0.663  -0.926  -0.933  -0.926  -0.663  -0.663  -0.663
69    P         1.503   1.503   1.503   1.385   1.382   1.385   1.503   1.503   1.503
70    I        -0.663  -0.663  -0.663  -0.680  -0.677  -0.680  -0.663  -0.663  -0.663
71    Q        -0.663  -0.663  -0.663  -0.615  -0.619  -0.615  -0.663  -0.663  -0.663
72    P        -0.663  -0.663  -0.663  -0.550  -0.554  -0.550  -0.663  -0.663  -0.663
73    P        -0.663  -0.663  -0.663  -0.848  -0.855  -0.848  -0.663  -0.663  -0.663
74    L         1.503   1.503   1.503   1.487   1.484   1.487   1.503   1.503   1.503
75    P         1.503   1.503   1.503   1.385   1.382   1.385   1.503   1.503   1.503
76    N        -0.663  -0.663  -0.663  -1.006  -1.004  -1.006  -0.663  -0.663  -0.663
77    L        -0.663  -0.663  -0.663  -0.722  -0.727  -0.722  -0.663  -0.663  -0.663
78    M        -0.663  -0.663  -0.663  -0.446  -0.442  -0.446  -0.663  -0.663  -0.663
79    H        -0.663  -0.663  -0.663  -0.590  -0.594  -0.590  -0.663  -0.663  -0.663
80    L        -0.663  -0.663  -0.663  -0.823  -0.829  -0.823  -0.663  -0.663  -0.663
81    S        -0.663  -0.663  -0.663  -0.900  -0.898  -0.900  -0.663  -0.663  -0.663
82    G        -0.663  -0.663  -0.663  -0.322  -0.324  -0.322  -0.663  -0.663  -0.663
83    P         1.503   1.503   1.503   1.385   1.382   1.385   1.503   1.503   1.503
84    S        -0.663  -0.663  -0.663  -0.688  -0.685  -0.688  -0.663  -0.663  -0.663
85    D        -0.663  -0.663  -0.663  -0.647  -0.643  -0.647  -0.663  -0.663  -0.663
86    Y         1.503   1.503   1.503   1.751   1.751   1.751   1.503   1.503   1.503
87    R        -0.663  -0.663  -0.663  -0.518  -0.513  -0.518  -0.663  -0.663  -0.663
88    S        -0.663  -0.663  -0.663  -0.772  -0.760  -0.772  -0.663  -0.663  -0.663
89    M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
90    H        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
91    Q        -0.663  -0.663  -0.663  -0.953  -0.951  -0.953  -0.663  -0.663  -0.663
92    S        -0.663  -0.663  -0.663  -0.953  -0.951  -0.953  -0.663  -0.663  -0.663
93    P         1.503   1.503   1.503   1.385   1.382   1.385   1.503   1.503   1.503
94    I        -0.663  -0.663  -0.663  -0.797  -0.803  -0.797  -0.663  -0.663  -0.663
95    H         1.503   1.503   1.503   1.697   1.696   1.697   1.503   1.503   1.503
96    P        -0.663  -0.663  -0.663  -0.848  -0.855  -0.848  -0.663  -0.663  -0.663
97    S        -0.663  -0.663  -0.663  -0.953  -0.951  -0.953  -0.663  -0.663  -0.663
98    Y        -0.663  -0.663  -0.663  -0.330  -0.332  -0.330  -0.663  -0.663  -0.663
99    I        -0.663  -0.663  -0.663  -0.526  -0.529  -0.526  -0.663  -0.663  -0.663
100   I        -0.663  -0.663  -0.663  -0.566  -0.570  -0.566  -0.663  -0.663  -0.663
101   P        -0.663  -0.663  -0.663  -0.534  -0.537  -0.534  -0.663  -0.663  -0.663
102   P        -0.663  -0.663  -0.663  -0.534  -0.537  -0.534  -0.663  -0.663  -0.663
103   H         1.503   1.503   1.503   1.697   1.696   1.697   1.503   1.503   1.503
104   S        -0.663  -0.663  -0.663  -0.772  -0.760  -0.772  -0.663  -0.663  -0.663
105   N        -0.663  -0.663  -0.663  -0.900  -0.907  -0.900  -0.663  -0.663  -0.663
106   E        -0.663  -0.663  -0.663  -0.688  -0.693  -0.688  -0.663  -0.663  -0.663
107   R        -0.663  -0.663  -0.663  -0.764  -0.760  -0.764  -0.663  -0.663  -0.663
108   K        -0.663  -0.663  -0.663  -0.574  -0.578  -0.574  -0.663  -0.663  -0.663
109   Q        -0.663  -0.663  -0.663  -0.823  -0.829  -0.823  -0.663  -0.663  -0.663
110   S         1.503   1.503   1.503   1.247   1.254   1.247   1.503   1.503   1.503
111   A        -0.663  -0.663  -0.663  -0.806  -0.794  -0.806  -0.663  -0.663  -0.663
112   S        -0.663  -0.663  -0.663  -0.814  -0.812  -0.814  -0.663  -0.663  -0.663
113   Y        -0.663  -0.663  -0.663  -0.623  -0.627  -0.623  -0.663  -0.663  -0.663
114   N        -0.663  -0.663  -0.663  -0.615  -0.619  -0.615  -0.663  -0.663  -0.663
115   R        -0.663  -0.663  -0.663  -0.688  -0.693  -0.688  -0.663  -0.663  -0.663
116   P        -0.663  -0.663  -0.663  -0.848  -0.855  -0.848  -0.663  -0.663  -0.663
117   Q         1.503   1.503   1.503   1.351   1.347   1.351   1.503   1.503   1.503
118   N        -0.663  -0.663  -0.663  -0.664  -0.668  -0.664  -0.663  -0.663  -0.663
119   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
120   H        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
121   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
122   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
123   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
124   Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
125   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
126   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
127   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
128   V        -0.663  -0.663  -0.663  -0.284  -0.286  -0.284  -0.663  -0.663  -0.663
129   F        -0.663  -0.663  -0.663  -0.224  -0.225  -0.224  -0.663  -0.663  -0.663
130   P         1.503   1.503   1.503   1.385   1.382   1.385   1.503   1.503   1.503
131   P         1.503   1.503   1.503   1.385   1.382   1.385   1.503   1.503   1.503
132   K        -0.663  -0.663  -0.663  -0.831  -0.829  -0.831  -0.663  -0.663  -0.663
133   S        -0.663  -0.663  -0.663  -0.655  -0.652  -0.655  -0.663  -0.663  -0.663
134   Y        -0.663  -0.663  -0.663  -0.623  -0.627  -0.623  -0.663  -0.663  -0.663
135   S        -0.663  -0.663  -0.663  -0.926  -0.924  -0.926  -0.663  -0.663  -0.663
136   I        -0.663  -0.663  -0.663  -0.647  -0.643  -0.647  -0.663  -0.663  -0.663
137   S        -0.663  -0.663  -0.663  -0.806  -0.794  -0.806  -0.663  -0.663  -0.663
138   Y         1.503   1.503   1.503   1.751   1.751   1.751   1.503   1.503   1.503
139   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
140   A        -0.663  -0.663  -0.663  -0.431  -0.426  -0.431  -0.663  -0.663  -0.663
141   P         1.503   1.503   1.503   1.385   1.382   1.385   1.503   1.503   1.503
142   Y        -0.663  -0.663  -0.663  -0.446  -0.450  -0.446  -0.663  -0.663  -0.663
143   Q         1.503   1.503   1.503   1.351   1.347   1.351   1.503   1.503   1.503
144   I        -0.663  -0.663  -0.663  -0.510  -0.513  -0.510  -0.663  -0.663  -0.663
145   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
146   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
147   P        -0.663  -0.663  -0.663  -0.797  -0.803  -0.797  -0.663  -0.663  -0.663
148   L        -0.663  -0.663  -0.663  -0.722  -0.727  -0.722  -0.663  -0.663  -0.663
149   P        -0.663  -0.663  -0.663  -0.623  -0.619  -0.623  -0.663  -0.663  -0.663
150   N        -0.663  -0.663  -0.663  -0.664  -0.668  -0.664  -0.663  -0.663  -0.663
151   G         1.503   1.503   1.503   1.762   1.761   1.762   1.503   1.503   1.503
152   L        -0.663  -0.663  -0.663  -0.722  -0.727  -0.722  -0.663  -0.663  -0.663
153   P         1.503   1.503   1.503   1.385   1.382   1.385   1.503   1.503   1.503
154   N        -0.663  -0.663  -0.663  -0.747  -0.744  -0.747  -0.663  -0.663  -0.663
155   Q        -0.663  -0.663  -0.663  -0.494  -0.497  -0.494  -0.663  -0.663  -0.663
156   S        -0.663  -0.663  -0.663  -0.953  -0.951  -0.953  -0.663  -0.663  -0.663
157   I        -0.663  -0.663  -0.663  -0.526  -0.529  -0.526  -0.663  -0.663  -0.663
158   S        -0.663  -0.663  -0.663  -0.806  -0.794  -0.806  -0.663  -0.663  -0.663
159   L        -0.663  -0.663  -0.663  -0.518  -0.521  -0.518  -0.663  -0.663  -0.663
160   N        -0.663  -0.663  -0.663  -0.926  -0.933  -0.926  -0.663  -0.663  -0.663
161   K        -0.663  -0.663  -0.663  -0.730  -0.735  -0.730  -0.663  -0.663  -0.663
162   E        -0.663  -0.663  -0.663  -0.738  -0.744  -0.738  -0.663  -0.663  -0.663
163   Y        -0.663  -0.663  -0.663  -0.330  -0.332  -0.330  -0.663  -0.663  -0.663
164   I        -0.663  -0.663  -0.663  -0.510  -0.513  -0.510  -0.663  -0.663  -0.663
165   A        -0.663  -0.663  -0.663  -0.631  -0.627  -0.631  -0.663  -0.663  -0.663
166   E        -0.663  -0.663  -0.663  -0.558  -0.562  -0.558  -0.663  -0.663  -0.663
167   E        -0.663  -0.663  -0.663  -0.814  -0.812  -0.814  -0.663  -0.663  -0.663
168   Q        -0.663  -0.663  -0.663  -0.953  -0.951  -0.953  -0.663  -0.663  -0.663
169   L        -0.663  -0.663  -0.663  -0.722  -0.727  -0.722  -0.663  -0.663  -0.663
170   S        -0.663  -0.663  -0.663  -0.655  -0.652  -0.655  -0.663  -0.663  -0.663
171   T         1.503   1.503   1.503   1.587   1.596   1.587   1.503   1.503   1.503
172   L        -0.663  -0.663  -0.663  -0.470  -0.473  -0.470  -0.663  -0.663  -0.663
173   P        -0.663  -0.663  -0.663  -0.705  -0.702  -0.705  -0.663  -0.663  -0.663
174   S        -0.663  -0.663  -0.663  -1.006  -1.004  -1.006  -0.663  -0.663  -0.663
175   R        -0.663  -0.663  -0.663  -0.407  -0.410  -0.407  -0.663  -0.663  -0.663
176   N        -0.663  -0.663  -0.663  -1.006  -1.004  -1.006  -0.663  -0.663  -0.663
177   T        -0.663  -0.663  -0.663  -0.672  -0.668  -0.672  -0.663  -0.663  -0.663
178   S        -0.663  -0.663  -0.663  -0.639  -0.635  -0.639  -0.663  -0.663  -0.663
179   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
180   T        -0.663  -0.663  -0.663  -0.697  -0.693  -0.697  -0.663  -0.663  -0.663
181   T        -0.663  -0.663  -0.663  -0.672  -0.668  -0.672  -0.663  -0.663  -0.663
182   A        -0.663  -0.663  -0.663  -0.730  -0.727  -0.730  -0.663  -0.663  -0.663
183   P         1.503   1.503   1.503   1.385   1.382   1.385   1.503   1.503   1.503
184   P        -0.663  -0.663  -0.663  -0.848  -0.855  -0.848  -0.663  -0.663  -0.663
185   S        -0.663  -0.663  -0.663  -0.772  -0.760  -0.772  -0.663  -0.663  -0.663
186   F        -0.663  -0.663  -0.663  -0.446  -0.450  -0.446  -0.663  -0.663  -0.663
187   Q        -0.663  -0.663  -0.663  -0.558  -0.562  -0.558  -0.663  -0.663  -0.663
188   N        -0.663  -0.663  -0.663  -0.631  -0.635  -0.631  -0.663  -0.663  -0.663
189   S        -0.663  -0.663  -0.663  -0.639  -0.635  -0.639  -0.663  -0.663  -0.663
190   A        -0.663  -0.663  -0.663  -0.705  -0.702  -0.705  -0.663  -0.663  -0.663
191   D        -0.663  -0.663  -0.663  -0.647  -0.643  -0.647  -0.663  -0.663  -0.663
192   T        -0.663  -0.663  -0.663  -0.672  -0.668  -0.672  -0.663  -0.663  -0.663
193   A        -0.663  -0.663  -0.663  -0.680  -0.677  -0.680  -0.663  -0.663  -0.663
194   K        -0.663  -0.663  -0.663  -0.755  -0.760  -0.755  -0.663  -0.663  -0.663
195   N        -0.663  -0.663  -0.663  -0.664  -0.668  -0.664  -0.663  -0.663  -0.663
196   S        -0.663  -0.663  -0.663  -0.806  -0.794  -0.806  -0.663  -0.663  -0.663
197   A        -0.663  -0.663  -0.663  -0.680  -0.677  -0.680  -0.663  -0.663  -0.663
198   D         1.503   1.503   1.503   1.653   1.663   1.653   1.503   1.503   1.503
199   N        -0.663  -0.663  -0.663  -0.615  -0.619  -0.615  -0.663  -0.663  -0.663
200   N        -0.663  -0.663  -0.663  -0.664  -0.668  -0.664  -0.663  -0.663  -0.663
201   D        -0.663  -0.663  -0.663  -0.550  -0.546  -0.550  -0.663  -0.663  -0.663
202   N        -0.663  -0.663  -0.663  -0.780  -0.777  -0.780  -0.663  -0.663  -0.663
203   N        -0.663  -0.663  -0.663  -1.006  -1.004  -1.006  -0.663  -0.663  -0.663
204   D        -0.663  -0.663  -0.663  -0.647  -0.643  -0.647  -0.663  -0.663  -0.663
205   N        -0.663  -0.663  -0.663  -0.747  -0.744  -0.747  -0.663  -0.663  -0.663
206   V        -0.663  -0.663  -0.663  -0.510  -0.513  -0.510  -0.663  -0.663  -0.663
207   T        -0.663  -0.663  -0.663  -0.558  -0.546  -0.558  -0.663  -0.663  -0.663
208   K        -0.663  -0.663  -0.663  -0.582  -0.578  -0.582  -0.663  -0.663  -0.663
209   P         1.503   1.503   1.503   1.385   1.382   1.385   1.503   1.503   1.503
210   V        -0.663  -0.663  -0.663  -0.284  -0.286  -0.284  -0.663  -0.663  -0.663
211   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
212   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
213   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
214   D        -0.663  -0.663  -0.663  -0.353  -0.348  -0.353  -0.663  -0.663  -0.663
215   T         1.503   1.503   1.503   1.587   1.596   1.587   1.503   1.503   1.503
216   Q        -0.663  -0.663  -0.663  -0.697  -0.693  -0.697  -0.663  -0.663  -0.663
217   L         1.503   1.503   1.503   1.487   1.484   1.487   1.503   1.503   1.503
218   I        -0.663  -0.663  -0.663  -0.722  -0.727  -0.722  -0.663  -0.663  -0.663
219   S        -0.663  -0.663  -0.663  -0.772  -0.760  -0.772  -0.663  -0.663  -0.663
220   S         1.503   1.503   1.503   1.247   1.254   1.247   1.503   1.503   1.503
221   S         1.503   1.503   1.503   1.247   1.254   1.247   1.503   1.503   1.503
222   G        -0.663  -0.663  -0.663  -0.431  -0.426  -0.431  -0.663  -0.663  -0.663
223   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
224   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
225   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
226   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
227   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
228   K         1.503   1.503   1.503   1.509   1.507   1.509   1.503   1.503   1.503
229   T         1.503   1.503   1.503   1.587   1.596   1.587   1.503   1.503   1.503
230   L        -0.663  -0.663  -0.663  -0.655  -0.660  -0.655  -0.663  -0.663  -0.663
231   R        -0.663  -0.663  -0.663  -0.574  -0.578  -0.574  -0.663  -0.663  -0.663
232   N         1.503   1.503   1.503   1.282   1.277   1.282   1.503   1.503   1.503
233   T         1.503   1.503   1.503   1.587   1.596   1.587   1.503   1.503   1.503
234   R        -0.663  -0.663  -0.663  -0.574  -0.578  -0.574  -0.663  -0.663  -0.663
235   R         1.503   1.503   1.503   1.598   1.596   1.598   1.503   1.503   1.503
236   A         1.503   1.503   1.503   1.543   1.552   1.543   1.503   1.503   1.503
237   A        -0.663  -0.663  -0.663  -0.446  -0.442  -0.446  -0.663  -0.663  -0.663
238   Q         1.503   1.503   1.503   1.351   1.347   1.351   1.503   1.503   1.503
239   N         1.503   1.503   1.503   1.282   1.277   1.282   1.503   1.503   1.503
240   R         1.503   1.503   1.503   1.598   1.596   1.598   1.503   1.503   1.503
241   T        -0.663  -0.663  -0.663  -0.582  -0.578  -0.582  -0.663  -0.663  -0.663
242   A         1.503   1.503   1.503   1.543   1.552   1.543   1.503   1.503   1.503
243   Q         1.503   1.503   1.503   1.351   1.347   1.351   1.503   1.503   1.503
244   K         1.503   1.503   1.503   1.509   1.507   1.509   1.503   1.503   1.503
245   A         1.503   1.503   1.503   1.543   1.552   1.543   1.503   1.503   1.503
246   F         1.503   1.503   1.503   1.859   1.859   1.859   1.503   1.503   1.503
247   R         1.503   1.503   1.503   1.598   1.596   1.598   1.503   1.503   1.503
248   Q         1.503   1.503   1.503   1.351   1.347   1.351   1.503   1.503   1.503
249   R         1.503   1.503   1.503   1.598   1.596   1.598   1.503   1.503   1.503
250   K         1.503   1.503   1.503   1.509   1.507   1.509   1.503   1.503   1.503
251   E         1.503   1.503   1.503   1.532   1.529   1.532   1.503   1.503   1.503
252   K        -0.663  -0.663  -0.663  -0.755  -0.760  -0.755  -0.663  -0.663  -0.663
253   Y         1.503   1.503   1.503   1.751   1.751   1.751   1.503   1.503   1.503
254   I         1.503   1.503   1.503   1.419   1.416   1.419   1.503   1.503   1.503
255   K         1.503   1.503   1.503   1.509   1.507   1.509   1.503   1.503   1.503
256   N        -0.663  -0.663  -0.663  -0.823  -0.829  -0.823  -0.663  -0.663  -0.663
257   L         1.503   1.503   1.503   1.487   1.484   1.487   1.503   1.503   1.503
258   E         1.503   1.503   1.503   1.532   1.529   1.532   1.503   1.503   1.503
259   Q        -0.663  -0.663  -0.663  -0.926  -0.933  -0.926  -0.663  -0.663  -0.663
260   K        -0.663  -0.663  -0.663  -0.623  -0.627  -0.623  -0.663  -0.663  -0.663
261   S        -0.663  -0.663  -0.663  -0.806  -0.794  -0.806  -0.663  -0.663  -0.663
262   K         1.503   1.503   1.503   1.509   1.507   1.509   1.503   1.503   1.503
263   I        -0.663  -0.663  -0.663  -0.722  -0.727  -0.722  -0.663  -0.663  -0.663
264   F        -0.663  -0.663  -0.663  -0.446  -0.450  -0.446  -0.663  -0.663  -0.663
265   D         1.503   1.503   1.503   1.653   1.663   1.653   1.503   1.503   1.503
266   D         1.503   1.503   1.503   1.653   1.663   1.653   1.503   1.503   1.503
267   L        -0.663  -0.663  -0.663  -0.462  -0.465  -0.462  -0.663  -0.663  -0.663
268   L        -0.663  -0.663  -0.663  -0.486  -0.489  -0.486  -0.663  -0.663  -0.663
269   A        -0.663  -0.663  -0.663  -0.615  -0.611  -0.615  -0.663  -0.663  -0.663
270   E        -0.663  -0.663  -0.663  -0.623  -0.627  -0.623  -0.663  -0.663  -0.663
271   N         1.503   1.503   1.503   1.282   1.277   1.282   1.503   1.503   1.503
272   N        -0.663  -0.663  -0.663  -0.926  -0.933  -0.926  -0.663  -0.663  -0.663
273   N        -0.663  -0.663  -0.663  -0.697  -0.693  -0.697  -0.663  -0.663  -0.663
274   F        -0.663  -0.663  -0.663  -0.400  -0.402  -0.400  -0.663  -0.663  -0.663
275   K        -0.663  -0.663  -0.663  -0.582  -0.578  -0.582  -0.663  -0.663  -0.663
276   S         1.503   1.503   1.503   1.247   1.254   1.247   1.503   1.503   1.503
277   L        -0.663  -0.663  -0.663  -0.639  -0.643  -0.639  -0.663  -0.663  -0.663
278   N         1.503   1.503   1.503   1.282   1.277   1.282   1.503   1.503   1.503
279   D        -0.663  -0.663  -0.663  -0.518  -0.513  -0.518  -0.663  -0.663  -0.663
280   S        -0.663  -0.663  -0.663  -0.953  -0.951  -0.953  -0.663  -0.663  -0.663
281   L         1.503   1.503   1.503   1.487   1.484   1.487   1.503   1.503   1.503
282   R         1.503   1.503   1.503   1.598   1.596   1.598   1.503   1.503   1.503
283   N        -0.663  -0.663  -0.663  -0.697  -0.693  -0.697  -0.663  -0.663  -0.663
284   D        -0.663  -0.663  -0.663  -0.231  -0.225  -0.231  -0.663  -0.663  -0.663
285   N        -0.663  -0.663  -0.663  -0.823  -0.829  -0.823  -0.663  -0.663  -0.663
286   N         1.503   1.503   1.503   1.282   1.277   1.282   1.503   1.503   1.503
287   I        -0.663  -0.663  -0.663  -0.639  -0.643  -0.639  -0.663  -0.663  -0.663
288   L         1.503   1.503   1.503   1.487   1.484   1.487   1.503   1.503   1.503
289   I         1.503   1.503   1.503   1.419   1.416   1.419   1.503   1.503   1.503
290   A        -0.663  -0.663  -0.663  -0.598  -0.594  -0.598  -0.663  -0.663  -0.663
291   Q        -0.663  -0.663  -0.663  -0.755  -0.760  -0.755  -0.663  -0.663  -0.663
292   H        -0.663  -0.663  -0.663  -0.518  -0.521  -0.518  -0.663  -0.663  -0.663
293   E        -0.663  -0.663  -0.663  -0.623  -0.627  -0.623  -0.663  -0.663  -0.663
294   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
295   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
296   R        -0.663  -0.663  -0.663  -0.470  -0.465  -0.470  -0.663  -0.663  -0.663
297   N         1.503   1.503   1.503   1.282   1.277   1.282   1.503   1.503   1.503
298   A        -0.663  -0.663  -0.663  -0.431  -0.426  -0.431  -0.663  -0.663  -0.663
299   I         1.503   1.503   1.503   1.419   1.416   1.419   1.503   1.503   1.503
300   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
301   M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
302   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
303   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
304   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
305   E         1.503   1.503   1.503   1.532   1.529   1.532   1.503   1.503   1.503
306   Y        -0.663  -0.663  -0.663  -0.276  -0.278  -0.276  -0.663  -0.663  -0.663
307   D         1.503   1.503   1.503   1.653   1.663   1.653   1.503   1.503   1.503
308   V        -0.663  -0.663  -0.663  -0.510  -0.513  -0.510  -0.663  -0.663  -0.663
309   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
310   C        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
311   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
312   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
313   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
314   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
315   M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
316   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
317   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
318   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
319   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
320   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
321   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
322   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
323   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
324   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
325   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
326   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
327   H        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
328   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
329   M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
330   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
331   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
332   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
333   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
334   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
335   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
336   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
337   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
338   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
339   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
340   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
341   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
342   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
343   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
344   F        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
345   H        -0.663  -0.663  -0.663  -0.590  -0.594  -0.590  -0.663  -0.663  -0.663
346   A        -0.663  -0.663  -0.663  -0.806  -0.794  -0.806  -0.663  -0.663  -0.663
347   E        -0.663  -0.663  -0.663  -0.518  -0.513  -0.518  -0.663  -0.663  -0.663
348   Y        -0.663  -0.663  -0.663  -0.216  -0.218  -0.216  -0.663  -0.663  -0.663
349   I        -0.663  -0.663  -0.663  -0.722  -0.727  -0.722  -0.663  -0.663  -0.663
350   R        -0.663  -0.663  -0.663  -0.470  -0.465  -0.470  -0.663  -0.663  -0.663
351   M        -0.663  -0.663  -0.663  -0.470  -0.473  -0.470  -0.663  -0.663  -0.663
352   I         1.503   1.503   1.503   1.419   1.416   1.419   1.503   1.503   1.503
353   E        -0.663  -0.663  -0.663  -0.789  -0.794  -0.789  -0.663  -0.663  -0.663
354   D        -0.663  -0.663  -0.663  -0.510  -0.497  -0.510  -0.663  -0.663  -0.663
355   I        -0.663  -0.663  -0.663  -0.900  -0.898  -0.900  -0.663  -0.663  -0.663
356   E        -0.663  -0.663  -0.663  -0.688  -0.693  -0.688  -0.663  -0.663  -0.663
357   N        -0.663  -0.663  -0.663  -1.006  -1.004  -1.006  -0.663  -0.663  -0.663
358   T        -0.663  -0.663  -0.663  -0.558  -0.546  -0.558  -0.663  -0.663  -0.663
359   K        -0.663  -0.663  -0.663  -0.831  -0.829  -0.831  -0.663  -0.663  -0.663
360   R         1.503   1.503   1.503   1.598   1.596   1.598   1.503   1.503   1.503
361   K        -0.663  -0.663  -0.663  -0.574  -0.578  -0.574  -0.663  -0.663  -0.663
362   E        -0.663  -0.663  -0.663  -0.639  -0.643  -0.639  -0.663  -0.663  -0.663
363   Q         1.503   1.503   1.503   1.351   1.347   1.351   1.503   1.503   1.503
364   E         1.503   1.503   1.503   1.532   1.529   1.532   1.503   1.503   1.503
365   Q         1.503   1.503   1.503   1.351   1.347   1.351   1.503   1.503   1.503
366   R        -0.663  -0.663  -0.663  -0.439  -0.442  -0.439  -0.663  -0.663  -0.663
367   D        -0.663  -0.663  -0.663  -0.518  -0.513  -0.518  -0.663  -0.663  -0.663
368   E         1.503   1.503   1.503   1.532   1.529   1.532   1.503   1.503   1.503
369   I         1.503   1.503   1.503   1.419   1.416   1.419   1.503   1.503   1.503
370   E        -0.663  -0.663  -0.663  -0.814  -0.812  -0.814  -0.663  -0.663  -0.663
371   Q        -0.663  -0.663  -0.663  -0.755  -0.760  -0.755  -0.663  -0.663  -0.663
372   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
373   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
374   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
375   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
376   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
377   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
378   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
379   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
380   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
381   E        -0.663  -0.663  -0.663  -0.814  -0.812  -0.814  -0.663  -0.663  -0.663
382   I         1.503   1.503   1.503   1.419   1.416   1.419   1.503   1.503   1.503
383   V        -0.663  -0.663  -0.663  -0.423  -0.418  -0.423  -0.663  -0.663  -0.663
384   G         1.503   1.503   1.503   1.762   1.761   1.762   1.503   1.503   1.503
385   R        -0.663  -0.663  -0.663  -0.558  -0.562  -0.558  -0.663  -0.663  -0.663
386   H        -0.663  -0.663  -0.663  -0.502  -0.505  -0.502  -0.663  -0.663  -0.663
387   S         1.503   1.503   1.503   1.247   1.254   1.247   1.503   1.503   1.503
388   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
389   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
390   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
391   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q03935
Output conservation file - output/Q03935
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
