1     M         1.851   1.870   1.983   2.163   2.196   2.369   2.118   2.151   2.345
2     D         0.501   0.360   0.243   0.681   0.510   0.345   0.516   0.300   0.103
3     Y         0.008  -0.062   0.038   0.197   0.105   0.252  -0.296  -0.373  -0.236
4     K        -1.209  -1.268  -1.252  -0.971  -1.049  -1.036  -0.962  -1.015  -0.958
5     E         1.160   1.060   0.999   0.753   0.624   0.546   1.256   1.083   0.934
6     E         1.851   1.870   1.983   1.364   1.390   1.564   2.118   2.151   2.345
7     Q         1.851   1.870   1.983   1.976   2.011   2.180   2.118   2.151   2.345
8     K        -1.357  -1.317  -1.275  -1.311  -1.234  -1.227  -1.100  -1.062  -0.978
9     Q         0.199   0.158   0.110   0.061  -0.083  -0.216   0.024  -0.064  -0.126
10    E         1.851   1.870   1.983   1.364   1.390   1.564   2.118   2.151   2.345
11    L         0.199   0.147   0.106   0.182   0.105   0.060   0.024  -0.079  -0.131
12    E         1.851   1.870   1.983   1.364   1.390   1.564   2.118   2.151   2.345
13    V         0.819   0.802   0.797   0.938   0.905   0.858   0.640   0.597   0.523
14    L         1.851   1.870   1.983   1.786   1.824   1.989   2.118   2.151   2.345
15    E        -0.375  -0.366  -0.413  -0.784  -0.777  -0.793  -0.469  -0.456  -0.496
16    S         1.851   1.870   1.983   2.037   2.066   2.242   2.118   2.151   2.345
17    I         1.851   1.870   1.983   1.970   2.001   2.174   2.118   2.151   2.345
18    Y         1.160   1.120   1.002   1.565   1.527   1.369   1.256   1.188   0.940
19    P         1.851   1.870   1.983   2.081   2.109   2.286   2.118   2.151   2.345
20    D         0.819   0.771   0.788   0.562   0.451   0.365   0.640   0.535   0.504
21    E         1.851   1.870   1.983   1.364   1.390   1.564   2.118   2.151   2.345
22    L        -0.057  -0.080  -0.005  -0.183  -0.211  -0.099  -0.346  -0.385  -0.290
23    R        -0.693  -0.727  -0.817  -0.423  -0.485  -0.691  -0.592  -0.635  -0.709
24    I        -1.209  -1.237  -1.219  -0.859  -0.889  -0.907  -0.962  -0.988  -0.929
25    I        -0.375  -0.287  -0.391  -0.248  -0.110  -0.260  -0.469  -0.353  -0.468
26    N        -0.375  -0.341  -0.416  -0.133  -0.089  -0.223  -0.469  -0.432  -0.501
27    D        -0.493  -0.405  -0.450  -0.380  -0.258  -0.301  -0.617  -0.509  -0.541
28    E        -0.135  -0.135  -0.027  -0.539  -0.494  -0.323  -0.469  -0.469  -0.323
29    Y        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
30    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
31    K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
32    I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
33    K        -0.693  -0.669  -0.557  -0.905  -0.860  -0.728  -0.839  -0.809  -0.663
34    F         0.199   0.243   0.133   0.462   0.520   0.343   0.024   0.070  -0.087
35    E        -1.209  -1.172  -1.223  -1.356  -1.312  -1.284  -0.962  -0.922  -0.933
36    V         0.501   0.612   0.295   0.747   0.896   0.445   0.516   0.683   0.185
37    A        -1.329  -1.255  -1.248  -1.082  -0.961  -0.956  -1.085  -1.016  -0.959
38    I         0.199   0.150   0.130   0.241   0.191   0.103   0.024  -0.033  -0.092
39    K        -1.209  -1.268  -1.252  -0.893  -0.963  -0.932  -0.962  -1.015  -0.958
40    L         1.160   1.060   0.999   1.179   1.060   0.968   1.256   1.083   0.934
41    E         0.819   0.896   0.868   0.562   0.719   0.571   0.640   0.781   0.671
42    L        -1.329  -1.343  -1.277  -1.052  -1.055  -0.940  -1.085  -1.089  -0.981
43    D        -0.891  -0.859  -0.874  -0.773  -0.773  -0.807  -0.839  -0.803  -0.780
44    T        -1.011  -0.989  -0.924  -1.141  -1.168  -1.029  -0.962  -0.937  -0.829
45    G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
46    D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
47    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
48    T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
49    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
50    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
51    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
52    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
53    S         0.616   0.629   0.719   0.493   0.513   0.617   0.226   0.242   0.355
54    V        -1.103  -1.069  -0.973  -0.816  -0.774  -0.631  -1.036  -1.000  -0.870
55    L        -0.594  -0.623  -0.540  -0.571  -0.582  -0.463  -0.720  -0.756  -0.643
56    T        -1.357  -1.372  -1.284  -1.294  -1.394  -1.245  -1.100  -1.110  -0.986
57    K        -0.573  -0.593  -0.509  -0.626  -0.666  -0.565  -0.715  -0.732  -0.613
58    E        -1.329  -1.345  -1.272  -1.323  -1.292  -1.243  -1.085  -1.091  -0.977
59    H         0.199   0.141   0.100   0.554   0.447   0.380   0.024  -0.086  -0.142
60    T        -0.891  -0.796  -0.860  -0.505  -0.372  -0.429  -0.839  -0.730  -0.761
61    I        -0.119  -0.102  -0.317   0.057   0.090  -0.195  -0.099  -0.078  -0.359
62    I        -1.329  -1.318  -1.257  -1.121  -1.116  -1.065  -1.085  -1.067  -0.966
63    A        -0.693  -0.640  -0.807  -0.418  -0.352  -0.529  -0.592  -0.535  -0.699
64    E        -0.891  -0.810  -0.854  -0.762  -0.611  -0.739  -0.839  -0.747  -0.758
65    F         0.063   0.026   0.081   0.240   0.221   0.316  -0.223  -0.248  -0.172
66    K        -0.573  -0.542  -0.499  -0.517  -0.479  -0.394  -0.715  -0.689  -0.604
67    L         0.579   0.597   0.711   0.434   0.473   0.640   0.147   0.173   0.338
68    P         1.160   1.060   0.999   1.483   1.356   1.276   1.256   1.083   0.934
69    E        -0.119  -0.079  -0.327  -0.415  -0.367  -0.678  -0.099  -0.044  -0.372
70    N        -1.011  -1.023  -0.928  -1.202  -1.205  -1.077  -0.962  -0.963  -0.833
71    Y         1.851   1.870   1.983   2.155   2.192   2.361   2.118   2.151   2.345
72    P         1.851   1.870   1.983   2.081   2.109   2.286   2.118   2.151   2.345
73    D         0.637   0.662   0.737   0.115   0.171   0.206   0.270   0.312   0.394
74    E         0.063   0.039   0.081  -0.274  -0.321  -0.269  -0.223  -0.249  -0.180
75    P        -0.891  -0.808  -0.863  -0.544  -0.439  -0.492  -0.839  -0.752  -0.768
76    C         1.160   1.236   1.024   1.512   1.603   1.369   1.256   1.380   0.982
77    L        -1.329  -1.355  -1.260  -1.354  -1.372  -1.272  -1.085  -1.098  -0.968
78    I         0.063  -0.003   0.069  -0.044  -0.130  -0.026  -0.223  -0.301  -0.198
79    S        -0.891  -0.905  -0.880  -0.857  -0.915  -0.904  -0.839  -0.851  -0.786
80    L         0.819   0.835   0.803   0.813   0.838   0.719   0.640   0.662   0.535
81    E        -1.209  -1.237  -1.223  -1.313  -1.343  -1.231  -0.962  -0.988  -0.933
82    A        -1.965  -1.934  -1.836  -1.416  -1.375  -1.235  -1.331  -1.303  -1.172
83    Q        -1.329  -1.317  -1.259  -1.338  -1.279  -1.164  -1.085  -1.069  -0.967
84    E         0.501   0.465   0.256   0.177   0.132  -0.131   0.516   0.462   0.123
85    V        -1.647  -1.658  -1.570  -1.308  -1.322  -1.218  -1.208  -1.210  -1.086
86    A        -0.891  -0.886  -0.867  -0.743  -0.716  -0.746  -0.839  -0.827  -0.771
87    L        -0.573  -0.525  -0.507  -1.082  -0.977  -0.931  -0.715  -0.669  -0.610
88    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
89    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
90    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
91    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
92    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
93    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
94    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
95    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
96    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
97    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
98    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
99    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
100   N         0.259   0.315   0.146  -0.151  -0.073  -0.317   0.147   0.232  -0.052
101   D         0.259   0.284   0.126   0.165   0.210  -0.122   0.147   0.183  -0.084
102   N        -1.437  -1.416  -1.307  -1.398  -1.351  -1.216  -1.167  -1.143  -1.004
103   E        -0.589  -0.552  -0.516  -0.762  -0.704  -0.696  -0.729  -0.686  -0.618
104   E        -0.005  -0.028   0.039  -0.460  -0.474  -0.386  -0.291  -0.317  -0.227
105   D         0.259   0.318   0.159   0.165   0.265  -0.056   0.147   0.238  -0.031
106   N        -0.005   0.036   0.047  -0.575  -0.523  -0.470  -0.291  -0.234  -0.220
107   E        -0.005   0.011   0.039  -0.460  -0.461  -0.428  -0.291  -0.275  -0.232
108   E         0.683   0.704   0.754   0.019   0.050   0.108   0.366   0.400   0.430
109   D         1.024   0.965   0.905   1.045   0.969   0.870   1.023   0.911   0.747
110   E         0.390   0.472   0.223  -0.045   0.069  -0.310   0.348   0.472   0.071
111   D         0.008   0.052   0.055  -0.528  -0.503  -0.455  -0.296  -0.233  -0.211
112   E         0.390   0.398   0.204   0.056   0.061  -0.168   0.348   0.361   0.040
113   V        -1.357  -1.287  -1.263  -1.079  -0.985  -0.948  -1.100  -1.032  -0.967
114   E         0.097   0.150   0.093  -0.475  -0.405  -0.466  -0.135  -0.066  -0.149
115   Y        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
116   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
117   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
118   H        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
119   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
120   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
121   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
122   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
123   L        -1.013  -1.005  -0.927  -0.848  -0.832  -0.700  -0.948  -0.938  -0.826
124   K        -0.005  -0.043   0.044  -0.005  -0.033   0.090  -0.291  -0.335  -0.221
125   K        -0.005  -0.062   0.016  -0.238  -0.316  -0.222  -0.291  -0.366  -0.264
126   F        -0.589  -0.566  -0.513  -0.265  -0.228  -0.144  -0.729  -0.698  -0.614
127   E        -0.005  -0.062   0.016  -0.646  -0.714  -0.593  -0.291  -0.366  -0.264
128   N         1.851   1.870   1.983   2.075   2.108   2.279   2.118   2.151   2.345
129   L        -0.005   0.026   0.041  -0.107  -0.047  -0.043  -0.291  -0.243  -0.230
130   P        -0.493  -0.510  -0.495  -0.229  -0.275  -0.228  -0.617  -0.642  -0.595
131   D         0.598   0.612   0.715  -0.029  -0.016   0.104   0.187   0.204   0.346
132   L        -0.429  -0.425  -0.452  -0.250  -0.236  -0.337  -0.510  -0.507  -0.534
133   I         1.024   0.965   0.905   1.200   1.122   1.019   1.023   0.911   0.747
134   S        -0.589  -0.590  -0.531  -0.759  -0.759  -0.629  -0.729  -0.727  -0.634
135   F         0.259   0.226   0.138   0.512   0.453   0.268   0.147   0.091  -0.064
136   K        -0.429  -0.369  -0.443  -0.602  -0.499  -0.692  -0.510  -0.431  -0.523
137   G        -1.437  -1.416  -1.307  -1.378  -1.329  -1.196  -1.167  -1.143  -1.004
138   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
139   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
140   Y         0.097   0.201   0.099   0.129   0.273   0.156  -0.135   0.022  -0.134
141   L        -0.993  -1.014  -0.917  -0.852  -0.858  -0.716  -0.939  -0.953  -0.820
142   P        -0.993  -1.013  -0.937  -0.608  -0.635  -0.517  -0.939  -0.952  -0.838
143   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
144   E        -0.891  -0.898  -0.864  -0.926  -0.912  -0.879  -0.839  -0.839  -0.769
145   L         1.160   1.243   1.027   1.220   1.328   1.088   1.256   1.391   0.988
146   T        -1.329  -1.341  -1.251  -1.015  -1.055  -0.909  -1.085  -1.088  -0.961
147   V        -1.329  -1.310  -1.255  -1.347  -1.337  -1.212  -1.085  -1.065  -0.964
148   Q        -0.693  -0.727  -0.817  -0.558  -0.590  -0.792  -0.592  -0.635  -0.709
149   L        -0.119  -0.243  -0.357   0.057  -0.104  -0.249  -0.099  -0.267  -0.411
150   E        -1.329  -1.312  -1.267  -1.494  -1.424  -1.334  -1.085  -1.065  -0.973
151   S         0.501   0.463   0.270   0.168   0.111  -0.129   0.516   0.451   0.145
152   Q        -0.891  -0.960  -0.912  -0.939  -1.028  -0.955  -0.839  -0.900  -0.815
153   I         0.063   0.073   0.073   0.097   0.100   0.134  -0.223  -0.216  -0.193
154   E         0.501   0.599   0.295   0.131   0.259  -0.158   0.516   0.663   0.185
155   T        -0.057   0.010   0.046  -0.667  -0.582  -0.519  -0.346  -0.245  -0.210
156   D        -0.453  -0.482  -0.457  -0.304  -0.298  -0.244  -0.592  -0.615  -0.554
157   M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
158   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
159   L         0.199   0.262   0.147   0.175   0.266   0.113   0.024   0.114  -0.063
160   G         1.851   1.870   1.983   2.090   2.122   2.295   2.118   2.151   2.345
161   M         1.160   1.185   1.014   1.555   1.594   1.360   1.256   1.297   0.963
162   Q        -0.135  -0.100  -0.011  -0.134  -0.082   0.054  -0.469  -0.419  -0.300
163   M         0.819   0.849   0.819   1.077   1.125   1.043   0.640   0.690   0.570
164   C        -0.135  -0.103  -0.013  -0.016   0.012   0.141  -0.469  -0.422  -0.303
165   F         1.851   1.870   1.983   2.098   2.129   2.303   2.118   2.151   2.345
166   A        -0.119  -0.237  -0.346   0.284   0.113  -0.028  -0.099  -0.259  -0.398
167   L         0.501   0.465   0.256   0.594   0.559   0.262   0.516   0.462   0.123
168   I        -0.375  -0.470  -0.445  -0.126  -0.239  -0.192  -0.469  -0.576  -0.535
169   S         0.819   0.853   0.832   0.961   1.012   0.957   0.640   0.699   0.596
170   S        -1.209  -1.233  -1.225  -0.756  -0.804  -0.784  -0.962  -0.984  -0.934
171   I         0.063   0.026   0.081  -0.087  -0.114  -0.031  -0.223  -0.248  -0.172
172   K         1.851   1.870   1.983   1.873   1.910   2.077   2.118   2.151   2.345
173   E         0.579   0.597   0.710  -0.113  -0.087   0.078   0.147   0.172   0.336
174   R        -0.693  -0.597  -0.794  -0.902  -0.791  -0.982  -0.592  -0.480  -0.684
175   C        -0.119  -0.145  -0.316   0.312   0.261   0.062  -0.099  -0.140  -0.358
176   E         1.160   1.060   0.999   0.774   0.651   0.587   1.256   1.083   0.934
177   Q        -1.209  -1.216  -1.220  -0.888  -0.912  -0.925  -0.962  -0.967  -0.930
178   W        -0.375  -0.364  -0.419  -0.219  -0.207  -0.240  -0.469  -0.442  -0.500
179   Y        -0.693  -0.756  -0.823  -0.191  -0.307  -0.385  -0.592  -0.668  -0.717
180   S        -1.647  -1.646  -1.559  -1.256  -1.256  -1.131  -1.208  -1.202  -1.078
181   E         0.501   0.538   0.273   0.190   0.235  -0.085   0.516   0.572   0.150
182   Q         0.063   0.036   0.076   0.007  -0.014   0.059  -0.223  -0.253  -0.186
183   L        -0.119  -0.243  -0.357   0.055  -0.103  -0.251  -0.099  -0.267  -0.411
184   N        -1.647  -1.639  -1.554  -1.369  -1.372  -1.264  -1.208  -1.197  -1.074
185   K        -1.965  -1.934  -1.836  -1.855  -1.736  -1.676  -1.331  -1.303  -1.172
186   L        -1.329  -1.357  -1.261  -1.392  -1.485  -1.293  -1.085  -1.100  -0.968
187   E        -0.453  -0.528  -0.450  -0.782  -0.850  -0.733  -0.592  -0.662  -0.549
188   K         0.199   0.168   0.113   0.273   0.219   0.168   0.024  -0.041  -0.121
189   Q        -0.693  -0.663  -0.559  -1.056  -0.976  -0.870  -0.839  -0.802  -0.665
190   Y        -1.329  -1.363  -1.259  -0.847  -0.903  -0.764  -1.085  -1.104  -0.967
191   E         0.579   0.602   0.713  -0.113  -0.099   0.062   0.147   0.183   0.342
192   L        -0.891  -0.777  -0.856  -1.217  -1.094  -1.126  -0.839  -0.716  -0.761
193   E        -1.329  -1.312  -1.267  -1.526  -1.428  -1.379  -1.085  -1.065  -0.973
194   A        -1.329  -1.337  -1.259  -1.033  -1.011  -0.894  -1.085  -1.084  -0.967
195   Q        -0.573  -0.596  -0.492  -0.685  -0.690  -0.552  -0.715  -0.728  -0.592
196   E        -0.453  -0.491  -0.460  -0.799  -0.813  -0.740  -0.592  -0.624  -0.557
197   R        -0.891  -0.960  -0.912  -0.777  -0.939  -0.878  -0.839  -0.900  -0.815
198   E         1.160   1.060   0.999   0.762   0.634   0.563   1.256   1.083   0.934
199   K        -1.209  -1.268  -1.252  -1.147  -1.297  -1.280  -0.962  -1.015  -0.958
200   K        -0.119  -0.145  -0.316  -0.422  -0.460  -0.676  -0.099  -0.140  -0.358
201   E         1.851   1.870   1.983   1.364   1.390   1.564   2.118   2.151   2.345
202   Q         0.819   0.744   0.783   0.921   0.801   0.839   0.640   0.481   0.493
203   A         0.819   0.896   0.868   0.794   0.917   0.854   0.640   0.781   0.671
204   K         1.851   1.870   1.983   1.873   1.910   2.077   2.118   2.151   2.345
205   F         1.851   1.870   1.983   2.098   2.129   2.303   2.118   2.151   2.345
206   H        -0.119  -0.096  -0.315   0.433   0.464   0.147  -0.099  -0.071  -0.357
207   G         1.851   1.870   1.983   2.090   2.122   2.295   2.118   2.151   2.345
208   T         1.851   1.870   1.983   2.051   2.080   2.256   2.118   2.151   2.345
209   K         0.637   0.616   0.718   0.519   0.486   0.636   0.270   0.213   0.352
210   V         1.851   1.870   1.983   2.040   2.070   2.245   2.118   2.151   2.345
211   T         1.160   1.120   1.002   1.461   1.416   1.267   1.256   1.188   0.940
212   R        -0.375  -0.430  -0.443  -0.118  -0.189  -0.217  -0.469  -0.529  -0.530
213   E         0.501   0.545   0.266   0.131   0.191  -0.202   0.516   0.583   0.139
214   S         1.160   1.120   1.002   1.441   1.395   1.241   1.256   1.188   0.940
215   Y        -0.057   0.019   0.047   0.212   0.327   0.366  -0.346  -0.230  -0.209
216   L        -0.693  -0.697  -0.805  -0.487  -0.492  -0.623  -0.592  -0.600  -0.697
217   E        -0.119  -0.108  -0.310  -0.396  -0.390  -0.625  -0.099  -0.086  -0.350
218   W         1.851   1.870   1.983   2.242   2.274   2.447   2.118   2.151   2.345
219   R         1.160   1.060   0.999   1.471   1.341   1.241   1.256   1.083   0.934
220   S        -1.329  -1.278  -1.249  -1.206  -1.183  -1.105  -1.085  -1.037  -0.959
221   K        -0.375  -0.430  -0.445  -0.213  -0.285  -0.278  -0.469  -0.545  -0.537
222   F         1.851   1.870   1.983   2.098   2.129   2.303   2.118   2.151   2.345
223   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
224   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
225   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
226   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
227   R         0.501   0.360   0.243   0.877   0.686   0.492   0.516   0.300   0.103
228   Q        -0.573  -0.560  -0.508  -0.869  -0.890  -0.827  -0.715  -0.699  -0.614
229   E         1.160   1.060   0.999   0.755   0.627   0.550   1.256   1.083   0.934
230   L         0.063   0.116   0.087   0.072   0.139   0.152  -0.223  -0.154  -0.170
231   K         0.063   0.057   0.094  -0.069  -0.082  -0.062  -0.223  -0.215  -0.161
232   L        -0.119  -0.126  -0.340   0.031   0.027  -0.269  -0.099  -0.109  -0.389
233   D        -0.375  -0.419  -0.442  -0.596  -0.716  -0.771  -0.469  -0.532  -0.535
234   E        -1.209  -1.257  -1.222  -1.474  -1.506  -1.430  -0.962  -1.006  -0.932
235   R        -0.891  -0.929  -0.906  -0.731  -0.853  -0.821  -0.839  -0.875  -0.810
236   D        -0.119  -0.243  -0.357  -0.058  -0.232  -0.503  -0.099  -0.267  -0.411
237   Q        -1.011  -0.961  -0.917  -1.346  -1.289  -1.213  -0.962  -0.913  -0.824
238   V        -0.375  -0.373  -0.408  -0.816  -0.831  -0.836  -0.469  -0.460  -0.490
239   R        -0.375  -0.421  -0.444  -0.256  -0.376  -0.446  -0.469  -0.535  -0.536
240   R        -0.129  -0.136  -0.029  -0.343  -0.454  -0.286  -0.456  -0.470  -0.327
241   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
242   M        -1.209  -1.176  -1.215  -1.141  -1.100  -1.169  -0.962  -0.926  -0.925
243   K        -0.891  -0.908  -0.869  -0.699  -0.719  -0.642  -0.839  -0.853  -0.774
244   A         0.819   0.853   0.832   0.982   1.027   0.991   0.640   0.699   0.596
245   H        -0.119  -0.243  -0.357   0.322   0.123  -0.110  -0.099  -0.267  -0.411
246   H        -1.647  -1.651  -1.575  -1.016  -1.022  -0.927  -1.208  -1.205  -1.089
247   G         0.501   0.360   0.243   0.879   0.689   0.498   0.516   0.300   0.103
248   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
249   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
250   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
251   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
252   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
253   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
254   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
255   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
256   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
257   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
258   K         0.637   0.649   0.737   0.525   0.545   0.670   0.270   0.283   0.394
259   L         0.819   0.771   0.788   0.759   0.694   0.712   0.640   0.535   0.504
260   T         0.819   0.887   0.826   0.970   1.075   0.953   0.640   0.764   0.583
261   G         1.851   1.870   1.983   2.090   2.122   2.295   2.118   2.151   2.345
262   K         0.819   0.802   0.797   0.818   0.795   0.767   0.640   0.597   0.523
263   Q         0.637   0.630   0.721   0.242   0.188   0.266   0.270   0.244   0.360
264   M        -0.057  -0.059   0.014  -0.075  -0.112  -0.008  -0.346  -0.356  -0.261
265   F         1.160   1.120   1.002   1.528   1.490   1.354   1.256   1.188   0.940
266   E         1.851   1.870   1.983   1.364   1.390   1.564   2.118   2.151   2.345
267   Q        -0.453  -0.527  -0.471  -0.376  -0.448  -0.353  -0.592  -0.660  -0.569
268   G         1.160   1.060   0.999   1.499   1.379   1.299   1.256   1.083   0.934
269   V         0.501   0.612   0.295   0.594   0.745   0.321   0.516   0.683   0.185
270   V        -0.375  -0.352  -0.416  -0.248  -0.222  -0.355  -0.469  -0.450  -0.502
271   G         0.501   0.417   0.255   0.888   0.771   0.534   0.516   0.385   0.122
272   T        -0.594  -0.631  -0.540  -0.618  -0.704  -0.592  -0.720  -0.765  -0.643
273   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
274   D         1.851   1.870   1.983   1.789   1.821   1.992   2.118   2.151   2.345
275   E         0.598   0.605   0.712  -0.119  -0.095   0.069   0.187   0.190   0.340
276   Y        -0.266  -0.156  -0.352  -0.232  -0.074  -0.410  -0.296  -0.149  -0.405
277   M        -0.589  -0.585  -0.507  -1.000  -0.996  -0.841  -0.729  -0.721  -0.609
278   E         1.024   1.101   0.964   0.551   0.660   0.453   1.023   1.155   0.866
279   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
280   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
281   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
282   D         0.683   0.723   0.754   0.213   0.294   0.241   0.366   0.437   0.431
283   D         0.683   0.723   0.754   0.520   0.584   0.618   0.366   0.437   0.431
284   A        -1.013  -1.005  -0.933  -1.185  -1.161  -1.018  -0.948  -0.938  -0.832
285   S        -0.589  -0.614  -0.517  -0.546  -0.573  -0.432  -0.729  -0.752  -0.619
286   V        -0.005   0.046   0.037  -0.010   0.071   0.018  -0.291  -0.224  -0.231
287   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
288   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
289   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
290   V        -0.085  -0.085  -0.000  -0.267  -0.285  -0.206  -0.405  -0.403  -0.286
291   A        -0.594  -0.599  -0.540  -0.422  -0.441  -0.375  -0.720  -0.726  -0.643
292   K        -0.493  -0.408  -0.465  -1.017  -0.910  -0.948  -0.617  -0.516  -0.558
293   G        -1.357  -1.367  -1.284  -1.283  -1.389  -1.242  -1.100  -1.105  -0.986
294   L         0.097   0.116   0.106   0.166   0.221   0.190  -0.135  -0.094  -0.123
295   A        -0.630  -0.608  -0.526  -0.685  -0.650  -0.538  -0.778  -0.751  -0.632
296   K        -0.993  -0.926  -0.914  -0.826  -0.737  -0.711  -0.939  -0.873  -0.818
297   T        -0.589  -0.552  -0.511  -0.628  -0.583  -0.499  -0.729  -0.683  -0.613
298   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
299   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
300   A        -0.594  -0.572  -0.510  -0.472  -0.433  -0.362  -0.720  -0.695  -0.607
301   N        -1.965  -1.934  -1.836  -1.764  -1.810  -1.585  -1.331  -1.303  -1.172
302   Q        -1.329  -1.321  -1.250  -1.314  -1.299  -1.218  -1.085  -1.072  -0.960
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q03768
Output conservation file - output/Q03768
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
