1     M         1.958   1.980   2.064   2.181   2.214   2.345   2.193   2.227   2.362
2     N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
3     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     D         1.958   1.980   2.064   1.912   1.946   2.073   2.193   2.227   2.362
9     P         1.958   1.980   2.064   2.261   2.292   2.426   2.193   2.227   2.362
10    F         1.958   1.980   2.064   2.244   2.278   2.409   2.193   2.227   2.362
11    Q        -1.041  -1.073  -1.028  -1.074  -1.107  -1.041  -0.867  -0.887  -0.818
12    Q         0.272   0.310   0.296  -0.101  -0.031  -0.062  -0.043   0.012  -0.001
13    V         1.958   1.980   2.064   2.068   2.095   2.231   2.193   2.227   2.362
14    V        -0.741  -0.720  -0.689  -0.673  -0.649  -0.569  -0.749  -0.726  -0.669
15    K        -0.741  -0.751  -0.694  -0.881  -0.900  -0.832  -0.749  -0.751  -0.674
16    D         1.958   1.980   2.064   1.912   1.946   2.073   2.193   2.227   2.362
17    T        -0.215  -0.236  -0.234  -0.134  -0.169  -0.126  -0.396  -0.413  -0.392
18    K        -1.641  -1.627  -1.560  -1.414  -1.435  -1.294  -1.102  -1.087  -1.002
19    E        -0.628  -0.659  -0.665  -0.656  -0.691  -0.688  -0.632  -0.663  -0.644
20    Q         1.306   1.340   1.182   1.272   1.322   1.105   1.369   1.422   1.112
21    L         0.158   0.179   0.212  -0.129  -0.098  -0.043  -0.161  -0.132  -0.105
22    N        -1.341  -1.354  -1.301  -1.122  -1.171  -1.067  -0.985  -0.990  -0.915
23    R        -0.628  -0.622  -0.632  -0.684  -0.676  -0.678  -0.632  -0.615  -0.608
24    I        -0.141  -0.174  -0.210  -0.309  -0.363  -0.398  -0.279  -0.329  -0.358
25    N        -0.928  -0.815  -0.948  -0.858  -0.660  -0.942  -0.749  -0.630  -0.745
26    N        -0.741  -0.780  -0.692  -0.910  -0.939  -0.818  -0.749  -0.775  -0.672
27    Y        -0.328  -0.266  -0.280  -0.439  -0.375  -0.353  -0.514  -0.434  -0.443
28    I        -0.215  -0.285  -0.232  -0.336  -0.398  -0.309  -0.396  -0.464  -0.392
29    T        -1.041  -0.997  -0.992  -0.975  -0.904  -0.912  -0.867  -0.826  -0.791
30    R        -0.382  -0.375  -0.315  -0.646  -0.642  -0.565  -0.574  -0.561  -0.484
31    H        -0.724  -0.733  -0.697  -0.331  -0.341  -0.285  -0.728  -0.731  -0.674
32    N        -1.410  -1.394  -1.327  -1.243  -1.221  -1.121  -1.035  -1.018  -0.934
33    T        -1.041  -1.061  -1.000  -0.843  -0.876  -0.777  -0.867  -0.878  -0.797
34    A        -1.041  -1.037  -0.995  -0.907  -0.915  -0.845  -0.867  -0.859  -0.793
35    G        -0.252  -0.152  -0.233  -0.150  -0.012  -0.110  -0.420  -0.299  -0.382
36    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
37    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
38    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
39    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
40    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
41    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
42    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
43    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
44    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
45    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
46    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
47    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
48    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
49    -         0.207   0.240   0.244   0.311   0.342   0.364  -0.109  -0.073  -0.068
50    -        -0.743  -0.739  -0.692  -0.588  -0.586  -0.530  -0.736  -0.729  -0.666
51    D        -1.341  -1.338  -1.306  -1.353  -1.361  -1.346  -0.985  -0.978  -0.919
52    D        -1.041  -1.078  -1.013  -1.091  -1.139  -1.043  -0.867  -0.891  -0.806
53    D        -1.041  -1.074  -0.998  -1.119  -1.156  -1.041  -0.867  -0.888  -0.795
54    Q        -1.041  -1.024  -0.996  -1.029  -0.980  -0.950  -0.867  -0.848  -0.794
55    E        -1.641  -1.627  -1.560  -1.644  -1.608  -1.527  -1.102  -1.087  -1.002
56    E        -1.041  -1.010  -0.995  -1.059  -1.011  -0.987  -0.867  -0.838  -0.793
57    E         0.758   0.775   0.856   0.328   0.355   0.472   0.310   0.332   0.441
58    I        -0.328  -0.252  -0.282  -0.501  -0.410  -0.426  -0.514  -0.424  -0.444
59    Q        -0.328  -0.325  -0.298  -0.599  -0.599  -0.549  -0.514  -0.517  -0.466
60    D        -0.741  -0.741  -0.689  -0.731  -0.704  -0.644  -0.749  -0.744  -0.670
61    I         0.158   0.136   0.191   0.046  -0.004   0.073  -0.161  -0.202  -0.138
62    L        -1.041  -1.004  -0.994  -0.971  -0.932  -0.878  -0.867  -0.832  -0.792
63    K        -0.741  -0.719  -0.688  -0.976  -0.944  -0.883  -0.749  -0.726  -0.669
64    D         0.272   0.246   0.285  -0.036  -0.052  -0.000  -0.043  -0.061  -0.015
65    V         0.100   0.232  -0.071   0.050   0.229  -0.204   0.075   0.254  -0.160
66    E        -0.628  -0.607  -0.624  -0.694  -0.651  -0.701  -0.632  -0.605  -0.604
67    E         1.958   1.980   2.064   1.906   1.939   2.067   2.193   2.227   2.362
68    T         0.685   0.635   0.475   0.904   0.829   0.577   0.663   0.583   0.317
69    I         0.272   0.307   0.292   0.004   0.051   0.065  -0.043   0.009  -0.007
70    V        -1.041  -1.080  -1.014  -1.017  -1.069  -0.966  -0.867  -0.892  -0.808
71    D         1.958   1.980   2.064   1.912   1.946   2.073   2.193   2.227   2.362
72    L         1.958   1.980   2.064   1.796   1.824   1.955   2.193   2.227   2.362
73    D        -1.041  -1.059  -1.008  -1.006  -1.021  -0.969  -0.867  -0.877  -0.803
74    R        -0.328  -0.341  -0.290  -0.598  -0.620  -0.544  -0.514  -0.520  -0.455
75    S         0.813   0.820   0.881   0.677   0.669   0.761   0.428   0.429   0.494
76    I         0.400   0.466   0.359   0.388   0.497   0.296   0.192   0.299   0.119
77    I        -0.928  -0.886  -0.945  -0.892  -0.818  -0.922  -0.749  -0.706  -0.743
78    V        -0.328  -0.325  -0.298  -0.357  -0.372  -0.306  -0.514  -0.517  -0.466
79    M        -0.441  -0.428  -0.349  -0.494  -0.485  -0.360  -0.632  -0.615  -0.518
80    K        -0.141  -0.155  -0.184  -0.206  -0.212  -0.267  -0.279  -0.283  -0.321
81    R        -1.041  -1.015  -0.992  -0.883  -0.843  -0.814  -0.867  -0.840  -0.790
82    D        -0.628  -0.608  -0.620  -0.706  -0.669  -0.719  -0.632  -0.611  -0.601
83    E        -0.441  -0.376  -0.554  -0.117  -0.013  -0.344  -0.396  -0.319  -0.516
84    N        -1.041  -1.041  -1.004  -1.079  -1.088  -1.029  -0.867  -0.861  -0.800
85    -         0.132   0.130   0.188   0.008   0.005   0.099  -0.217  -0.219  -0.147
86    -         1.092   1.068   1.043   1.376   1.343   1.296   0.988   0.934   0.837
87    -         0.313   0.387   0.293   0.368   0.496   0.294   0.084   0.198   0.024
88    -         1.178   1.176   1.106   1.015   1.011   0.898   1.147   1.137   0.965
89    -        -0.252  -0.242  -0.237  -0.245  -0.229  -0.219  -0.420  -0.402  -0.391
90    -        -1.067  -1.049  -1.015  -1.013  -0.996  -0.928  -0.881  -0.860  -0.806
91    E        -0.928  -0.895  -0.940  -0.731  -0.676  -0.724  -0.749  -0.715  -0.738
92    D         0.813   0.801   0.867   0.451   0.413   0.496   0.428   0.387   0.465
93    V         0.400   0.340   0.315   0.375   0.276   0.199   0.192   0.103   0.042
94    S        -0.741  -0.730  -0.686  -0.849  -0.819  -0.763  -0.749  -0.736  -0.668
95    G        -0.928  -0.963  -0.967  -0.705  -0.765  -0.779  -0.749  -0.782  -0.763
96    R         1.958   1.980   2.064   2.108   2.136   2.271   2.193   2.227   2.362
97    E        -0.328  -0.308  -0.288  -0.381  -0.337  -0.322  -0.514  -0.485  -0.454
98    A        -1.041  -0.975  -0.997  -0.965  -0.859  -0.915  -0.867  -0.808  -0.794
99    Q        -1.341  -1.339  -1.288  -1.330  -1.339  -1.244  -0.985  -0.979  -0.905
100   V        -0.141  -0.049  -0.166  -0.174  -0.035  -0.200  -0.279  -0.162  -0.297
101   K        -0.328  -0.360  -0.292  -0.388  -0.453  -0.345  -0.514  -0.542  -0.459
102   N        -0.441  -0.428  -0.350  -0.832  -0.810  -0.710  -0.632  -0.614  -0.520
103   I         0.685   0.665   0.483   0.617   0.585   0.326   0.663   0.627   0.330
104   K        -1.041  -1.080  -1.014  -0.956  -1.006  -0.915  -0.867  -0.892  -0.808
105   Q        -0.928  -0.875  -0.943  -0.835  -0.743  -0.892  -0.749  -0.694  -0.740
106   Q         0.158   0.142   0.190  -0.150  -0.192  -0.121  -0.161  -0.193  -0.139
107   L        -0.141  -0.135  -0.184  -0.283  -0.283  -0.315  -0.279  -0.268  -0.319
108   D        -1.341  -1.320  -1.283  -1.323  -1.278  -1.235  -0.985  -0.963  -0.901
109   A        -1.041  -0.975  -0.997  -0.942  -0.841  -0.855  -0.867  -0.808  -0.794
110   L        -0.441  -0.520  -0.586  -0.399  -0.513  -0.573  -0.396  -0.488  -0.552
111   K        -0.141  -0.139  -0.176  -0.252  -0.235  -0.304  -0.279  -0.262  -0.307
112   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
113   L        -0.039  -0.076  -0.173  -0.170  -0.241  -0.393  -0.113  -0.165  -0.296
114   R        -0.724  -0.726  -0.691  -0.725  -0.737  -0.696  -0.728  -0.724  -0.668
115   F        -0.724  -0.761  -0.709  -0.464  -0.543  -0.474  -0.728  -0.757  -0.685
116   D        -1.410  -1.390  -1.327  -1.422  -1.361  -1.302  -1.035  -1.016  -0.934
117   R        -1.067  -1.066  -1.018  -0.954  -0.970  -0.892  -0.881  -0.879  -0.808
118   R        -0.595  -0.533  -0.627  -0.430  -0.330  -0.507  -0.574  -0.504  -0.597
119   I        -0.348  -0.336  -0.302  -0.504  -0.473  -0.422  -0.519  -0.506  -0.462
120   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
121   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
122   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
123   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
124   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
125   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
126   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
127   Q        -0.382  -0.397  -0.316  -0.722  -0.711  -0.599  -0.574  -0.584  -0.485
128   E        -0.252  -0.186  -0.242  -0.277  -0.166  -0.275  -0.420  -0.333  -0.394
129   S        -0.141  -0.049  -0.166  -0.093   0.039  -0.137  -0.279  -0.162  -0.297
130   T         0.400   0.389   0.325   0.499   0.475   0.371   0.192   0.171   0.057
131   Q        -1.041  -1.064  -1.020  -1.035  -1.065  -1.012  -0.867  -0.881  -0.813
132   T        -0.441  -0.409  -0.542  -0.163  -0.119  -0.307  -0.396  -0.358  -0.503
133   T        -0.628  -0.659  -0.650  -0.430  -0.450  -0.435  -0.632  -0.653  -0.627
134   I        -1.041  -1.008  -1.013  -0.939  -0.883  -0.911  -0.867  -0.837  -0.807
135   P        -1.041  -1.001  -1.013  -0.951  -0.881  -0.917  -0.867  -0.830  -0.806
136   L        -0.741  -0.737  -0.702  -0.850  -0.837  -0.763  -0.749  -0.739  -0.681
137   E        -0.141  -0.145  -0.179  -0.285  -0.258  -0.309  -0.279  -0.267  -0.311
138   E        -0.741  -0.755  -0.697  -0.946  -0.944  -0.841  -0.749  -0.754  -0.676
139   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
140   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
141   T        -0.595  -0.566  -0.638  -0.340  -0.300  -0.425  -0.574  -0.542  -0.609
142   V        -0.252  -0.247  -0.255  -0.560  -0.560  -0.564  -0.420  -0.417  -0.415
143   E        -0.724  -0.755  -0.682  -0.903  -0.953  -0.831  -0.728  -0.752  -0.661
144   N        -1.067  -1.077  -1.015  -1.158  -1.196  -1.106  -0.881  -0.887  -0.806
145   S        -0.724  -0.671  -0.677  -0.707  -0.619  -0.637  -0.728  -0.675  -0.656
146   T        -0.743  -0.716  -0.685  -0.805  -0.775  -0.717  -0.736  -0.704  -0.659
147   L        -0.743  -0.693  -0.696  -0.591  -0.494  -0.544  -0.736  -0.679  -0.670
148   N         0.456   0.414   0.354   0.406   0.339   0.233   0.310   0.239   0.123
149   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
150   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
151   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
152   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
153   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
154   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
155   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
156   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
157   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
158   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
159   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
160   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
161   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
162   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
163   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
164   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
165   M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
166   A        -1.067  -1.069  -1.017  -0.992  -1.027  -0.932  -0.881  -0.879  -0.808
167   E        -0.724  -0.704  -0.674  -0.829  -0.806  -0.741  -0.728  -0.705  -0.654
168   N        -1.341  -1.363  -1.310  -1.317  -1.377  -1.308  -0.985  -0.996  -0.922
169   N        -1.641  -1.627  -1.560  -1.307  -1.292  -1.186  -1.102  -1.087  -1.002
170   D         0.400   0.366   0.329   0.315   0.274   0.204   0.192   0.152   0.066
171   G        -0.328  -0.321  -0.275  -0.275  -0.258  -0.172  -0.514  -0.494  -0.435
172   G         0.085   0.085   0.162  -0.084  -0.104   0.011  -0.279  -0.280  -0.183
173   M        -1.041  -1.024  -0.996  -0.876  -0.839  -0.829  -0.867  -0.848  -0.794
174   S        -1.041  -1.003  -0.994  -0.919  -0.881  -0.837  -0.867  -0.832  -0.792
175   N        -1.041  -1.064  -1.013  -1.007  -1.012  -0.957  -0.867  -0.880  -0.807
176   P        -0.628  -0.551  -0.635  -0.493  -0.404  -0.469  -0.632  -0.539  -0.610
177   F        -0.628  -0.618  -0.641  -0.520  -0.501  -0.507  -0.632  -0.610  -0.617
178   Q         1.306   1.313   1.183   1.304   1.322   1.162   1.369   1.377   1.114
179   E        -0.141  -0.186  -0.210  -0.323  -0.380  -0.431  -0.279  -0.327  -0.353
180   Q         0.400   0.420   0.347   0.188   0.228   0.099   0.192   0.226   0.102
181   M        -0.215  -0.201  -0.218  -0.328  -0.317  -0.327  -0.396  -0.378  -0.377
182   L        -0.215  -0.284  -0.249  -0.352  -0.407  -0.335  -0.396  -0.461  -0.409
183   R         0.272   0.272   0.267   0.073   0.064   0.050  -0.043  -0.045  -0.044
184   E         0.685   0.657   0.487   0.700   0.660   0.396   0.663   0.617   0.337
185   Q         1.958   1.980   2.064   1.864   1.901   2.025   2.193   2.227   2.362
186   D         1.958   1.980   2.064   1.912   1.946   2.073   2.193   2.227   2.362
187   V        -0.741  -0.739  -0.691  -0.928  -0.934  -0.838  -0.749  -0.743  -0.671
188   H        -0.141  -0.198  -0.210  -0.125  -0.189  -0.185  -0.279  -0.349  -0.360
189   L         1.958   1.980   2.064   1.796   1.824   1.955   2.193   2.227   2.362
190   D         1.958   1.980   2.064   1.912   1.946   2.073   2.193   2.227   2.362
191   G        -0.141  -0.064  -0.173  -0.039   0.091  -0.094  -0.279  -0.172  -0.311
192   I         0.813   0.793   0.868   0.658   0.609   0.715   0.428   0.371   0.466
193   H         0.400   0.311   0.301   0.758   0.631   0.616   0.192   0.056   0.023
194   K        -0.441  -0.442  -0.538  -0.424  -0.427  -0.573  -0.396  -0.396  -0.499
195   T         1.958   1.980   2.064   2.108   2.139   2.271   2.193   2.227   2.362
196   M         0.400   0.318   0.300   0.548   0.409   0.366   0.192   0.062   0.021
197   Q        -1.041  -0.996  -1.004  -0.853  -0.767  -0.762  -0.867  -0.823  -0.800
198   N         0.685   0.611   0.466   0.910   0.815   0.589   0.663   0.547   0.303
199   L         0.985   0.982   0.959   0.725   0.713   0.652   0.781   0.764   0.662
200   H         0.085   0.114   0.173   0.109   0.143   0.229  -0.279  -0.238  -0.166
201   I        -1.041  -1.069  -1.021  -1.279  -1.291  -1.223  -0.867  -0.884  -0.813
202   Q         1.958   1.980   2.064   1.864   1.901   2.025   2.193   2.227   2.362
203   A         1.958   1.980   2.064   2.071   2.096   2.234   2.193   2.227   2.362
204   Q        -1.341  -1.309  -1.286  -1.323  -1.267  -1.258  -0.985  -0.955  -0.904
205   T        -0.928  -0.988  -0.992  -0.786  -0.920  -0.939  -0.749  -0.805  -0.786
206   M         1.958   1.980   2.064   2.181   2.214   2.345   2.193   2.227   2.362
207   G         1.306   1.313   1.183   1.563   1.572   1.396   1.369   1.377   1.114
208   D        -0.741  -0.742  -0.693  -0.973  -0.956  -0.898  -0.749  -0.743  -0.673
209   E         1.958   1.980   2.064   1.906   1.939   2.067   2.193   2.227   2.362
210   L         1.958   1.980   2.064   1.796   1.824   1.955   2.193   2.227   2.362
211   E         0.685   0.670   0.480   0.754   0.737   0.474   0.663   0.637   0.324
212   N        -0.141  -0.125  -0.186  -0.340  -0.312  -0.432  -0.279  -0.253  -0.328
213   Q         1.958   1.980   2.064   1.864   1.901   2.025   2.193   2.227   2.362
214   G         0.100  -0.019  -0.123   0.418   0.236   0.070   0.075  -0.086  -0.231
215   Q        -1.041  -1.073  -1.028  -0.932  -0.982  -0.901  -0.867  -0.887  -0.818
216   L         0.272   0.301   0.271   0.043   0.082   0.064  -0.043  -0.014  -0.039
217   L         1.306   1.313   1.183   1.200   1.210   1.032   1.369   1.377   1.114
218   D         0.813   0.819   0.874   0.451   0.453   0.512   0.428   0.426   0.480
219   N        -1.041  -1.059  -0.998  -1.087  -1.103  -1.006  -0.867  -0.877  -0.796
220   M         0.272   0.249   0.272   0.048   0.014   0.064  -0.043  -0.055  -0.029
221   D         1.958   1.980   2.064   1.912   1.946   2.073   2.193   2.227   2.362
222   E        -1.341  -1.354  -1.292  -1.284  -1.298  -1.198  -0.985  -0.990  -0.908
223   G        -1.341  -1.363  -1.310  -1.204  -1.269  -1.194  -0.985  -0.996  -0.922
224   M        -0.141  -0.184  -0.220   0.023  -0.062  -0.116  -0.279  -0.340  -0.370
225   D         1.306   1.259   1.170   1.297   1.235   1.091   1.369   1.284   1.091
226   G        -1.041  -1.053  -1.004  -0.829  -0.848  -0.775  -0.867  -0.871  -0.800
227   V         0.685   0.629   0.474   0.901   0.820   0.598   0.663   0.576   0.315
228   V        -0.928  -0.866  -0.945  -0.652  -0.557  -0.697  -0.749  -0.685  -0.742
229   N         0.158   0.135   0.184   0.116   0.071   0.138  -0.161  -0.202  -0.148
230   K         0.985   0.948   0.957   1.080   1.012   1.002   0.781   0.695   0.659
231   L         1.306   1.343   1.188   1.203   1.250   1.047   1.369   1.428   1.125
232   A        -0.141  -0.112  -0.189  -0.249  -0.196  -0.305  -0.279  -0.228  -0.324
233   R         1.306   1.239   1.166   1.522   1.431   1.334   1.369   1.249   1.083
234   G         1.958   1.980   2.064   2.156   2.185   2.320   2.193   2.227   2.362
235   R         0.085   0.106   0.167  -0.089  -0.051   0.016  -0.279  -0.249  -0.175
236   R         0.272   0.249   0.272   0.242   0.221   0.241  -0.043  -0.055  -0.029
237   Q        -0.328  -0.334  -0.306  -0.473  -0.470  -0.411  -0.514  -0.525  -0.475
238   L         0.400   0.429   0.330   0.182   0.220   0.071   0.192   0.233   0.067
239   E        -0.928  -0.988  -0.992  -0.850  -0.930  -0.935  -0.749  -0.805  -0.786
240   W        -0.441  -0.512  -0.585   0.075  -0.034  -0.163  -0.396  -0.479  -0.551
241   V         0.400   0.405   0.317   0.510   0.508   0.384   0.192   0.188   0.046
242   Y        -0.628  -0.698  -0.672  -0.476  -0.583  -0.549  -0.632  -0.695  -0.650
243   E         0.400   0.318   0.300   0.304   0.177   0.146   0.192   0.062   0.021
244   K        -0.141  -0.184  -0.206   0.100   0.036   0.013  -0.279  -0.335  -0.354
245   N         1.306   1.259   1.170   1.493   1.441   1.307   1.369   1.284   1.091
246   K         0.100  -0.019  -0.123   0.328   0.141  -0.068   0.075  -0.086  -0.231
247   E         0.985   0.921   0.940   0.788   0.662   0.655   0.781   0.641   0.623
248   K        -0.215  -0.209  -0.220  -0.147  -0.145  -0.136  -0.396  -0.386  -0.379
249   Y        -0.741  -0.737  -0.702  -0.733  -0.763  -0.682  -0.749  -0.739  -0.681
250   D        -0.141  -0.067  -0.183  -0.083   0.038  -0.149  -0.279  -0.175  -0.319
251   D        -0.141  -0.196  -0.219  -0.192  -0.277  -0.294  -0.279  -0.353  -0.369
252   C         1.306   1.340   1.182   1.748   1.797   1.608   1.369   1.422   1.112
253   C         1.958   1.980   2.064   2.304   2.339   2.470   2.193   2.227   2.362
254   I         1.958   1.980   2.064   2.045   2.084   2.208   2.193   2.227   2.362
255   G        -0.628  -0.627  -0.644  -0.375  -0.396  -0.381  -0.632  -0.634  -0.623
256   L         0.400   0.361   0.308   0.182   0.101   0.037   0.192   0.109   0.032
257   L         1.958   1.980   2.064   1.796   1.824   1.955   2.193   2.227   2.362
258   I         0.985   1.021   1.000   0.975   1.037   0.975   0.781   0.842   0.748
259   V        -0.215  -0.240  -0.217  -0.193  -0.217  -0.168  -0.396  -0.419  -0.376
260   V        -0.141  -0.213  -0.198  -0.032  -0.126  -0.109  -0.279  -0.355  -0.343
261   L         1.306   1.239   1.166   1.210   1.120   1.024   1.369   1.249   1.083
262   I         0.400   0.359   0.331   0.516   0.468   0.423   0.192   0.141   0.077
263   V         0.272   0.245   0.280   0.185   0.151   0.206  -0.043  -0.071  -0.027
264   L         1.306   1.239   1.166   1.204   1.112   1.013   1.369   1.249   1.083
265   L         1.306   1.239   1.166   1.204   1.112   1.013   1.369   1.249   1.083
266   V         0.685   0.639   0.480   0.909   0.845   0.620   0.663   0.588   0.324
267   L         1.306   1.239   1.166   1.203   1.112   1.012   1.369   1.249   1.083
268   A        -0.328  -0.371  -0.306  -0.566  -0.657  -0.574  -0.514  -0.555  -0.475
269   F        -0.215  -0.238  -0.235  -0.172  -0.208  -0.223  -0.396  -0.415  -0.394
270   I        -0.141  -0.231  -0.217  -0.076  -0.201  -0.189  -0.279  -0.382  -0.366
271   A         0.272   0.245   0.282  -0.016  -0.051   0.018  -0.043  -0.062  -0.020
272   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
273   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
274   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
275   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
276   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
277   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q03322
Output conservation file - output/Q03322
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
