1     M         1.509   1.527   1.604   1.697   1.726   1.839   1.627   1.650   1.770
2     V        -0.804  -0.688  -0.816  -0.742  -0.559  -0.771  -0.775  -0.632  -0.762
3     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
9     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
10    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
11    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
12    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
13    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
14    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
15    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
16    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
17    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
18    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
19    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
20    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
21    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
22    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
23    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
24    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
25    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
26    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
27    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
28    K        -0.966  -0.903  -0.894  -1.219  -1.123  -1.100  -0.975  -0.897  -0.850
29    V        -1.396  -1.416  -1.325  -1.249  -1.241  -1.122  -1.175  -1.182  -1.053
30    T        -0.374  -0.309  -0.336  -0.437  -0.345  -0.375  -0.574  -0.497  -0.506
31    A         0.670   0.679   0.532   0.796   0.810   0.580   0.626   0.638   0.366
32    A         0.670   0.599   0.521   0.801   0.697   0.568   0.626   0.505   0.346
33    C         0.670   0.679   0.532   0.970   0.989   0.760   0.626   0.638   0.366
34    I        -0.106   0.051  -0.220  -0.205   0.015  -0.395  -0.174   0.046  -0.334
35    I         1.509   1.527   1.604   1.390   1.416   1.540   1.627   1.650   1.770
36    I         1.509   1.527   1.604   1.390   1.416   1.540   1.627   1.650   1.770
37    G         1.509   1.527   1.604   1.502   1.531   1.649   1.627   1.650   1.770
38    D         1.509   1.527   1.604   1.432   1.455   1.580   1.627   1.650   1.770
39    E         1.509   1.527   1.604   1.448   1.486   1.596   1.627   1.650   1.770
40    V         0.324   0.333   0.367   0.079   0.086   0.115   0.026   0.036   0.060
41    L         1.509   1.527   1.604   1.374   1.390   1.524   1.627   1.650   1.770
42    N         0.670   0.589   0.518   0.813   0.701   0.573   0.626   0.489   0.340
43    G         1.509   1.527   1.604   1.502   1.531   1.649   1.627   1.650   1.770
44    K         1.509   1.527   1.604   1.423   1.450   1.571   1.627   1.650   1.770
45    V        -0.374  -0.377  -0.332  -0.608  -0.596  -0.525  -0.574  -0.558  -0.495
46    V        -1.827  -1.786  -1.682  -1.940  -1.892  -1.717  -1.375  -1.330  -1.190
47    D         1.509   1.527   1.604   1.432   1.455   1.580   1.627   1.650   1.770
48    T         0.670   0.767   0.549   0.714   0.846   0.522   0.626   0.775   0.396
49    N         1.509   1.527   1.604   1.599   1.628   1.744   1.627   1.650   1.770
50    S         1.509   1.527   1.604   1.480   1.516   1.627   1.627   1.650   1.770
51    T        -1.827  -1.786  -1.682  -1.643  -1.559  -1.426  -1.375  -1.330  -1.190
52    F        -0.106  -0.244  -0.278   0.133  -0.061  -0.129  -0.174  -0.366  -0.415
53    F         0.670   0.589   0.518   0.882   0.781   0.671   0.626   0.489   0.340
54    A         1.509   1.527   1.604   1.587   1.610   1.731   1.627   1.650   1.770
55    K        -0.374  -0.333  -0.347  -0.475  -0.421  -0.406  -0.574  -0.531  -0.520
56    Y        -0.374  -0.424  -0.350  -0.249  -0.298  -0.187  -0.574  -0.629  -0.523
57    C         1.509   1.527   1.604   1.742   1.772   1.884   1.627   1.650   1.770
58    F         0.324   0.410   0.402   0.333   0.485   0.444   0.026   0.178   0.126
59    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
60    D        -0.966  -0.903  -0.894  -1.015  -0.890  -0.885  -0.975  -0.897  -0.850
61    H        -0.106   0.051  -0.220  -0.074   0.123  -0.204  -0.174   0.046  -0.334
62    G         0.670   0.599   0.521   0.712   0.616   0.482   0.626   0.505   0.346
63    I         0.670   0.679   0.532   0.580   0.592   0.358   0.626   0.638   0.366
64    Q        -0.966  -0.980  -0.901  -0.873  -0.887  -0.777  -0.975  -0.974  -0.857
65    L         1.509   1.527   1.604   1.374   1.390   1.524   1.627   1.650   1.770
66    K        -0.106  -0.027  -0.225  -0.062   0.050  -0.218  -0.174  -0.064  -0.340
67    E        -0.966  -0.898  -0.892  -1.047  -0.910  -0.926  -0.975  -0.893  -0.849
68    I        -0.106  -0.171  -0.265  -0.157  -0.256  -0.407  -0.174  -0.264  -0.397
69    A        -0.966  -0.938  -0.898  -1.108  -1.070  -0.992  -0.975  -0.935  -0.855
70    T         0.219   0.255   0.342  -0.058  -0.001   0.139  -0.174  -0.111   0.012
71    I        -0.374  -0.401  -0.348  -0.540  -0.557  -0.461  -0.574  -0.596  -0.519
72    G        -0.106  -0.179  -0.267  -0.000  -0.104  -0.236  -0.174  -0.276  -0.400
73    D         1.509   1.527   1.604   1.432   1.455   1.580   1.627   1.650   1.770
74    D         1.509   1.527   1.604   1.432   1.455   1.580   1.627   1.650   1.770
75    E         1.509   1.527   1.604   1.448   1.486   1.596   1.627   1.650   1.770
76    T        -0.804  -0.797  -0.843  -0.796  -0.785  -0.855  -0.775  -0.763  -0.792
77    Q        -0.374  -0.436  -0.364  -0.436  -0.550  -0.451  -0.574  -0.647  -0.541
78    I         1.509   1.527   1.604   1.390   1.416   1.540   1.627   1.650   1.770
79    V         0.670   0.599   0.521   0.660   0.552   0.417   0.626   0.505   0.346
80    D        -0.804  -0.736  -0.834  -0.766  -0.653  -0.810  -0.775  -0.694  -0.782
81    T        -0.374  -0.436  -0.364  -0.474  -0.565  -0.451  -0.574  -0.647  -0.541
82    V        -0.536  -0.516  -0.411  -0.926  -0.902  -0.725  -0.775  -0.743  -0.598
83    R        -0.804  -0.797  -0.843  -0.625  -0.605  -0.696  -0.775  -0.764  -0.792
84    R        -0.106  -0.098  -0.242   0.004   0.013  -0.243  -0.174  -0.167  -0.364
85    L         0.670   0.589   0.518   0.630   0.517   0.437   0.626   0.489   0.340
86    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
87    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
88    V        -0.804  -0.797  -0.843  -0.715  -0.691  -0.770  -0.775  -0.763  -0.792
89    K        -0.966  -0.903  -0.894  -1.119  -1.021  -0.985  -0.975  -0.897  -0.850
90    N        -0.374  -0.309  -0.335  -0.439  -0.349  -0.376  -0.574  -0.496  -0.504
91    Y        -0.106  -0.109  -0.245   0.066   0.052  -0.172  -0.174  -0.181  -0.369
92    D         0.670   0.767   0.549   0.675   0.799   0.516   0.626   0.775   0.396
93    F         0.670   0.599   0.521   0.819   0.715   0.564   0.626   0.505   0.346
94    I         0.324   0.324   0.364   0.043   0.036   0.087   0.026   0.019   0.053
95    I         0.324   0.333   0.364   0.079   0.087   0.108   0.026   0.036   0.054
96    S         0.670   0.767   0.545   0.725   0.858   0.534   0.626   0.776   0.389
97    T         0.324   0.417   0.412   0.148   0.317   0.280   0.026   0.190   0.144
98    G         1.509   1.527   1.604   1.502   1.531   1.649   1.627   1.650   1.770
99    G         1.509   1.527   1.604   1.502   1.531   1.649   1.627   1.650   1.770
100   I         0.670   0.599   0.521   0.580   0.471   0.338   0.626   0.505   0.346
101   G         1.509   1.527   1.604   1.502   1.531   1.649   1.627   1.650   1.770
102   P         0.670   0.599   0.521   0.799   0.697   0.563   0.626   0.505   0.346
103   T         1.509   1.527   1.604   1.515   1.538   1.661   1.627   1.650   1.770
104   H         1.509   1.527   1.604   1.736   1.764   1.878   1.627   1.650   1.770
105   D         1.509   1.527   1.604   1.432   1.455   1.580   1.627   1.650   1.770
106   D         1.509   1.527   1.604   1.432   1.455   1.580   1.627   1.650   1.770
107   I         1.509   1.527   1.604   1.390   1.416   1.540   1.627   1.650   1.770
108   T         1.509   1.527   1.604   1.515   1.538   1.661   1.627   1.650   1.770
109   Y         1.509   1.527   1.604   1.621   1.653   1.765   1.627   1.650   1.770
110   E        -0.106  -0.244  -0.278  -0.081  -0.275  -0.346  -0.174  -0.366  -0.415
111   C        -0.804  -0.797  -0.843  -0.682  -0.681  -0.726  -0.775  -0.763  -0.792
112   M        -0.106   0.040  -0.217  -0.111   0.090  -0.260  -0.174   0.030  -0.329
113   A         0.670   0.599   0.521   0.796   0.693   0.560   0.626   0.505   0.346
114   K         0.670   0.599   0.521   0.624   0.520   0.389   0.626   0.505   0.346
115   S        -0.966  -0.938  -0.898  -0.871  -0.817  -0.733  -0.975  -0.935  -0.855
116   F         1.509   1.527   1.604   1.630   1.662   1.774   1.627   1.650   1.770
117   N        -0.804  -0.909  -0.878  -0.643  -0.807  -0.784  -0.775  -0.889  -0.831
118   L         0.670   0.679   0.532   0.630   0.636   0.459   0.626   0.638   0.366
119   P        -0.804  -0.797  -0.843  -0.651  -0.659  -0.731  -0.775  -0.764  -0.792
120   C        -0.966  -1.015  -0.904  -0.896  -0.985  -0.815  -0.975  -1.008  -0.861
121   E        -1.396  -1.387  -1.315  -1.311  -1.296  -1.176  -1.175  -1.158  -1.044
122   L        -0.374  -0.318  -0.323  -0.630  -0.532  -0.520  -0.574  -0.484  -0.484
123   D        -0.106  -0.179  -0.267  -0.028  -0.130  -0.233  -0.174  -0.276  -0.400
124   E        -0.374  -0.401  -0.348  -0.453  -0.470  -0.387  -0.574  -0.596  -0.519
125   E         0.670   0.679   0.532   0.680   0.706   0.488   0.626   0.638   0.366
126   C        -0.966  -1.016  -0.901  -0.846  -0.929  -0.753  -0.975  -1.009  -0.858
127   K        -0.374  -0.436  -0.364  -0.546  -0.629  -0.506  -0.574  -0.647  -0.541
128   E        -0.536  -0.508  -0.408  -0.881  -0.832  -0.677  -0.775  -0.733  -0.595
129   R         0.670   0.589   0.518   0.779   0.658   0.520   0.626   0.489   0.340
130   M         1.509   1.527   1.604   1.697   1.726   1.839   1.627   1.650   1.770
131   R        -1.396  -1.269  -1.302  -1.255  -1.090  -1.096  -1.175  -1.041  -1.032
132   H        -1.396  -1.346  -1.310  -1.225  -1.172  -1.072  -1.175  -1.118  -1.040
133   K        -0.536  -0.506  -0.406  -0.956  -0.918  -0.748  -0.775  -0.731  -0.592
134   S         0.670   0.599   0.521   0.712   0.626   0.500   0.626   0.505   0.346
135   D        -1.827  -1.786  -1.682  -1.718  -1.657  -1.500  -1.375  -1.330  -1.190
136   P        -0.106  -0.171  -0.265   0.048  -0.058  -0.217  -0.174  -0.264  -0.397
137   E        -0.804  -0.909  -0.878  -0.762  -0.899  -0.870  -0.775  -0.889  -0.831
138   A        -1.396  -1.415  -1.325  -1.475  -1.537  -1.382  -1.175  -1.182  -1.053
139   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
140   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
141   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
142   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
143   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
144   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
145   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
146   R        -0.804  -0.909  -0.878  -0.677  -0.860  -0.828  -0.775  -0.889  -0.831
147   L        -0.106  -0.179  -0.267  -0.187  -0.305  -0.447  -0.174  -0.276  -0.400
148   D        -0.804  -0.863  -0.860  -0.766  -0.849  -0.841  -0.775  -0.840  -0.811
149   A        -1.396  -1.356  -1.309  -1.282  -1.222  -1.160  -1.175  -1.128  -1.039
150   D        -0.804  -0.752  -0.832  -0.754  -0.669  -0.792  -0.775  -0.713  -0.780
151   A        -0.804  -0.855  -0.852  -0.650  -0.735  -0.743  -0.775  -0.832  -0.802
152   L         0.670   0.679   0.532   0.608   0.613   0.420   0.626   0.638   0.366
153   K        -0.374  -0.431  -0.364  -0.528  -0.605  -0.487  -0.574  -0.642  -0.541
154   A         0.324   0.410   0.402   0.209   0.363   0.314   0.026   0.178   0.126
155   H        -1.396  -1.415  -1.325  -1.107  -1.148  -0.999  -1.175  -1.182  -1.053
156   Y         0.324   0.298   0.357   0.215   0.148   0.212   0.026  -0.029   0.041
157   Q         0.670   0.767   0.545   0.830   0.964   0.657   0.626   0.776   0.389
158   M         1.509   1.527   1.604   1.697   1.726   1.839   1.627   1.650   1.770
159   A         0.670   0.589   0.518   0.794   0.673   0.549   0.626   0.489   0.340
160   T        -0.106  -0.179  -0.267  -0.048  -0.161  -0.323  -0.174  -0.276  -0.400
161   M        -0.106  -0.027  -0.227  -0.086   0.012  -0.230  -0.174  -0.063  -0.344
162   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
163   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
164   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
165   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
166   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
167   P         1.509   1.527   1.604   1.590   1.613   1.734   1.627   1.650   1.770
168   K        -0.966  -0.951  -0.892  -0.981  -0.951  -0.871  -0.975  -0.950  -0.850
169   G        -0.106  -0.244  -0.278  -0.065  -0.279  -0.359  -0.174  -0.366  -0.415
170   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
171   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
172   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
173   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
174   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
175   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
176   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
177   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
178   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
179   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
180   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
181   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
182   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
183   T        -1.396  -1.356  -1.307  -1.354  -1.315  -1.223  -1.175  -1.128  -1.037
184   N        -1.396  -1.313  -1.310  -1.314  -1.183  -1.184  -1.175  -1.088  -1.040
185   V         0.670   0.589   0.518   0.666   0.545   0.422   0.626   0.489   0.340
186   K        -1.396  -1.421  -1.331  -1.380  -1.404  -1.266  -1.175  -1.186  -1.058
187   N        -0.966  -0.985  -0.897  -1.017  -1.036  -0.908  -0.975  -0.979  -0.854
188   Y        -0.106  -0.179  -0.267   0.046  -0.073  -0.244  -0.174  -0.276  -0.400
189   Y         0.324   0.273   0.347   0.329   0.240   0.340   0.026  -0.077   0.022
190   V        -0.804  -0.863  -0.860  -0.730  -0.839  -0.809  -0.775  -0.840  -0.811
191   C        -0.966  -0.953  -0.890  -0.849  -0.832  -0.744  -0.975  -0.951  -0.848
192   D        -0.374  -0.407  -0.350  -0.610  -0.653  -0.575  -0.574  -0.603  -0.523
193   D        -0.106  -0.244  -0.278  -0.144  -0.364  -0.438  -0.174  -0.366  -0.415
194   L         0.670   0.754   0.544   0.614   0.716   0.448   0.626   0.755   0.386
195   W         1.509   1.527   1.604   1.787   1.813   1.928   1.627   1.650   1.770
196   V         0.670   0.599   0.521   0.708   0.612   0.503   0.626   0.505   0.346
197   P         1.509   1.527   1.604   1.590   1.613   1.734   1.627   1.650   1.770
198   I         0.670   0.589   0.518   0.599   0.481   0.366   0.626   0.489   0.340
199   C        -0.374  -0.377  -0.332  -0.365  -0.368  -0.287  -0.574  -0.558  -0.495
200   S        -0.804  -0.909  -0.878  -0.780  -0.946  -0.913  -0.775  -0.889  -0.831
201   I        -0.374  -0.370  -0.334  -0.626  -0.607  -0.566  -0.574  -0.549  -0.498
202   S        -0.804  -0.688  -0.816  -0.660  -0.470  -0.699  -0.775  -0.632  -0.762
203   H        -1.396  -1.309  -1.310  -1.197  -1.089  -1.055  -1.175  -1.084  -1.039
204   K        -0.374  -0.424  -0.350  -0.459  -0.514  -0.394  -0.574  -0.629  -0.523
205   M         0.670   0.767   0.545   0.722   0.846   0.564   0.626   0.776   0.389
206   Y        -0.804  -0.812  -0.853  -0.507  -0.507  -0.569  -0.775  -0.781  -0.802
207   I         0.670   0.754   0.544   0.599   0.714   0.410   0.626   0.755   0.386
208   L         0.670   0.767   0.549   0.616   0.733   0.460   0.626   0.775   0.396
209   P         1.509   1.527   1.604   1.590   1.613   1.734   1.627   1.650   1.770
210   G         1.509   1.527   1.604   1.502   1.531   1.649   1.627   1.650   1.770
211   I         0.219   0.255   0.342  -0.150  -0.078   0.059  -0.174  -0.111   0.012
212   P         1.509   1.527   1.604   1.590   1.613   1.734   1.627   1.650   1.770
213   Q        -0.106  -0.179  -0.267   0.103   0.003  -0.163  -0.174  -0.276  -0.400
214   L         0.670   0.754   0.544   0.630   0.729   0.475   0.626   0.755   0.386
215   F         1.509   1.527   1.604   1.630   1.662   1.774   1.627   1.650   1.770
216   A        -0.966  -0.873  -0.890  -1.043  -0.908  -0.913  -0.975  -0.876  -0.848
217   R        -0.804  -0.863  -0.860  -0.670  -0.762  -0.786  -0.775  -0.840  -0.811
218   M         0.324   0.417   0.412   0.138   0.270   0.278   0.026   0.190   0.144
219   L         0.670   0.599   0.521   0.567   0.451   0.328   0.626   0.505   0.346
220   K        -0.966  -0.916  -0.888  -1.090  -1.027  -0.948  -0.975  -0.916  -0.846
221   A        -1.396  -1.309  -1.310  -1.385  -1.249  -1.259  -1.175  -1.084  -1.039
222   F        -0.966  -0.980  -0.901  -1.004  -1.026  -0.899  -0.975  -0.974  -0.857
223   T        -0.966  -0.938  -0.898  -1.148  -1.107  -1.048  -0.975  -0.935  -0.855
224   P         0.670   0.754   0.544   0.820   0.931   0.637   0.626   0.755   0.386
225   T        -0.804  -0.909  -0.878  -0.708  -0.865  -0.830  -0.775  -0.889  -0.831
226   L        -0.106  -0.117  -0.252  -0.205  -0.243  -0.450  -0.174  -0.193  -0.379
227   K        -0.966  -0.957  -0.890  -1.051  -1.018  -0.907  -0.975  -0.955  -0.848
228   K        -0.374  -0.337  -0.349  -0.444  -0.406  -0.365  -0.574  -0.543  -0.522
229   I        -0.966  -0.903  -0.894  -1.125  -0.991  -1.006  -0.975  -0.897  -0.850
230   Y        -0.374  -0.436  -0.364  -0.450  -0.571  -0.469  -0.574  -0.647  -0.541
231   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
232   L         0.462   0.360   0.399   0.289   0.093   0.156   0.276   0.086   0.121
233   D         0.462   0.518   0.429   0.341   0.434   0.260   0.276   0.368   0.176
234   K        -0.455  -0.401  -0.374  -0.633  -0.549  -0.508  -0.679  -0.610  -0.553
235   D        -0.374  -0.401  -0.348  -0.580  -0.625  -0.541  -0.574  -0.596  -0.519
236   P        -1.396  -1.415  -1.325  -1.363  -1.393  -1.240  -1.175  -1.182  -1.053
237   R        -0.804  -0.863  -0.860  -0.718  -0.820  -0.852  -0.775  -0.840  -0.811
238   E        -0.804  -0.909  -0.878  -0.782  -0.941  -0.898  -0.775  -0.889  -0.831
239   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
240   Y        -1.396  -1.421  -1.331  -1.255  -1.331  -1.178  -1.175  -1.186  -1.058
241   V        -1.396  -1.313  -1.310  -1.457  -1.333  -1.319  -1.175  -1.088  -1.040
242   R         1.509   1.527   1.604   1.590   1.620   1.734   1.627   1.650   1.770
243   Y        -0.804  -0.909  -0.878  -0.589  -0.753  -0.720  -0.775  -0.889  -0.831
244   F        -0.106  -0.244  -0.278   0.113  -0.089  -0.162  -0.174  -0.366  -0.415
245   V         0.670   0.589   0.518   0.660   0.537   0.410   0.626   0.489   0.340
246   R        -1.396  -1.415  -1.325  -1.331  -1.360  -1.204  -1.175  -1.182  -1.053
247   T         1.509   1.527   1.604   1.515   1.538   1.661   1.627   1.650   1.770
248   H        -1.396  -1.356  -1.309  -1.267  -1.224  -1.117  -1.175  -1.128  -1.039
249   L         0.670   0.599   0.521   0.585   0.476   0.361   0.626   0.505   0.346
250   T        -0.966  -0.938  -0.898  -0.986  -0.930  -0.872  -0.975  -0.935  -0.855
251   E         1.509   1.527   1.604   1.448   1.486   1.596   1.627   1.650   1.770
252   S         0.670   0.599   0.521   0.697   0.606   0.473   0.626   0.505   0.346
253   Q        -0.966  -0.985  -0.896  -0.963  -0.964  -0.840  -0.975  -0.979  -0.853
254   I        -0.374  -0.367  -0.345  -0.607  -0.602  -0.534  -0.574  -0.561  -0.516
255   S         0.219   0.255   0.342   0.004   0.083   0.211  -0.174  -0.111   0.012
256   K        -1.396  -1.313  -1.310  -1.202  -1.076  -1.075  -1.175  -1.088  -1.040
257   E        -0.106   0.051  -0.220   0.117   0.344  -0.056  -0.174   0.046  -0.334
258   L         1.509   1.527   1.604   1.374   1.390   1.524   1.627   1.650   1.770
259   K        -0.374  -0.337  -0.350  -0.437  -0.403  -0.417  -0.574  -0.542  -0.525
260   L        -0.966  -0.915  -0.889  -1.019  -0.931  -0.898  -0.975  -0.916  -0.847
261   I        -0.804  -0.622  -0.819  -0.803  -0.553  -0.808  -0.775  -0.552  -0.765
262   Q         0.670   0.589   0.518   0.866   0.757   0.637   0.626   0.489   0.340
263   D        -0.804  -0.752  -0.832  -0.805  -0.711  -0.857  -0.775  -0.713  -0.780
264   E        -0.536  -0.507  -0.407  -0.780  -0.720  -0.571  -0.775  -0.732  -0.593
265   S        -0.966  -0.938  -0.898  -0.926  -0.875  -0.803  -0.975  -0.935  -0.855
266   T        -0.966  -1.015  -0.904  -1.003  -1.080  -0.913  -0.975  -1.008  -0.861
267   K        -0.426  -0.345  -0.359  -0.639  -0.491  -0.541  -0.625  -0.507  -0.528
268   V        -0.426  -0.434  -0.381  -0.475  -0.513  -0.407  -0.625  -0.637  -0.558
269   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
270   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
271   S        -0.804  -0.909  -0.878  -0.787  -0.946  -0.923  -0.775  -0.889  -0.831
272   E        -1.396  -1.309  -1.310  -1.402  -1.270  -1.263  -1.175  -1.084  -1.039
273   A        -1.396  -1.381  -1.315  -1.419  -1.405  -1.291  -1.175  -1.153  -1.044
274   I        -0.106  -0.244  -0.278  -0.193  -0.419  -0.487  -0.174  -0.366  -0.415
275   K         1.509   1.527   1.604   1.423   1.450   1.571   1.627   1.650   1.770
276   I        -0.374  -0.424  -0.350  -0.676  -0.762  -0.637  -0.574  -0.629  -0.523
277   G         1.509   1.527   1.604   1.502   1.531   1.649   1.627   1.650   1.770
278   S         1.509   1.527   1.604   1.480   1.516   1.627   1.627   1.650   1.770
279   Y         1.509   1.527   1.604   1.621   1.653   1.765   1.627   1.650   1.770
280   P         1.509   1.527   1.604   1.590   1.613   1.734   1.627   1.650   1.770
281   H         0.670   0.589   0.518   0.965   0.855   0.730   0.626   0.489   0.340
282   F        -0.374  -0.436  -0.364  -0.206  -0.273  -0.158  -0.574  -0.647  -0.541
283   G        -0.106  -0.171  -0.265  -0.031  -0.119  -0.283  -0.174  -0.264  -0.397
284   M        -0.966  -0.948  -0.901  -0.959  -0.966  -0.862  -0.975  -0.944  -0.857
285   G        -0.374  -0.431  -0.364  -0.473  -0.552  -0.434  -0.574  -0.642  -0.541
286   F        -0.804  -0.909  -0.878  -0.619  -0.783  -0.768  -0.775  -0.889  -0.831
287   N         1.509   1.527   1.604   1.599   1.628   1.744   1.627   1.650   1.770
288   T         1.509   1.527   1.604   1.515   1.538   1.661   1.627   1.650   1.770
289   V         0.670   0.599   0.521   0.660   0.552   0.417   0.626   0.505   0.346
290   S         0.670   0.589   0.518   0.697   0.592   0.467   0.626   0.489   0.340
291   I         0.670   0.589   0.518   0.580   0.456   0.331   0.626   0.489   0.340
292   L        -0.374  -0.436  -0.364  -0.681  -0.791  -0.662  -0.574  -0.647  -0.541
293   G         1.509   1.527   1.604   1.502   1.531   1.649   1.627   1.650   1.770
294   E        -1.396  -1.421  -1.331  -1.359  -1.379  -1.249  -1.175  -1.186  -1.058
295   K         1.509   1.527   1.604   1.428   1.458   1.576   1.627   1.650   1.770
296   K        -0.260  -0.354  -0.344  -0.386  -0.551  -0.551  -0.390  -0.520  -0.507
297   D        -0.106  -0.109  -0.245  -0.078  -0.092  -0.278  -0.174  -0.181  -0.369
298   D        -0.804  -0.909  -0.878  -0.861  -1.040  -1.002  -0.775  -0.889  -0.831
299   S        -1.396  -1.387  -1.314  -1.386  -1.357  -1.257  -1.175  -1.157  -1.043
300   Y        -0.374  -0.422  -0.354  -0.345  -0.417  -0.326  -0.574  -0.628  -0.529
301   L         1.509   1.527   1.604   1.374   1.390   1.524   1.627   1.650   1.770
302   K        -0.966  -1.016  -0.901  -1.020  -1.088  -0.914  -0.975  -1.009  -0.858
303   S        -1.396  -1.352  -1.307  -1.310  -1.210  -1.170  -1.175  -1.124  -1.037
304   I         0.670   0.767   0.549   0.580   0.714   0.387   0.626   0.775   0.396
305   V        -0.804  -0.752  -0.831  -0.779  -0.702  -0.828  -0.775  -0.713  -0.778
306   N        -1.396  -1.356  -1.307  -1.254  -1.189  -1.127  -1.175  -1.128  -1.037
307   R        -1.827  -1.786  -1.682  -1.695  -1.636  -1.477  -1.375  -1.330  -1.190
308   V        -0.804  -0.746  -0.829  -0.856  -0.782  -0.925  -0.775  -0.705  -0.776
309   V        -0.804  -0.803  -0.842  -0.893  -0.891  -0.965  -0.775  -0.771  -0.791
310   N        -1.827  -1.786  -1.682  -1.586  -1.513  -1.370  -1.375  -1.330  -1.190
311   N        -0.804  -0.752  -0.831  -0.619  -0.534  -0.672  -0.775  -0.713  -0.778
312   L        -0.106  -0.244  -0.278  -0.205  -0.436  -0.495  -0.174  -0.366  -0.415
313   E        -0.804  -0.736  -0.834  -0.813  -0.712  -0.860  -0.775  -0.694  -0.782
314   G         1.509   1.527   1.604   1.502   1.531   1.649   1.627   1.650   1.770
315   E        -0.106  -0.244  -0.278  -0.079  -0.273  -0.342  -0.174  -0.366  -0.415
316   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
317   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
318   V        -0.106  -0.105  -0.246  -0.131  -0.131  -0.371  -0.174  -0.178  -0.370
319   I         0.670   0.589   0.518   0.599   0.481   0.366   0.626   0.489   0.340
320   S         0.219   0.245   0.337  -0.049   0.002   0.143  -0.174  -0.131   0.002
321   S        -1.396  -1.415  -1.325  -1.319  -1.324  -1.196  -1.175  -1.182  -1.053
322   E        -0.106  -0.109  -0.245  -0.091  -0.084  -0.308  -0.174  -0.181  -0.369
323   L        -0.804  -0.803  -0.842  -0.697  -0.696  -0.809  -0.775  -0.771  -0.791
324   E         0.670   0.589   0.518   0.649   0.541   0.407   0.626   0.489   0.340
325   N        -1.396  -1.269  -1.302  -1.372  -1.181  -1.222  -1.175  -1.041  -1.032
326   K        -1.396  -1.421  -1.331  -1.441  -1.489  -1.337  -1.175  -1.186  -1.058
327   F        -0.966  -0.984  -0.898  -0.833  -0.851  -0.726  -0.975  -0.978  -0.854
328   S         1.509   1.527   1.604   1.480   1.516   1.627   1.627   1.650   1.770
329   N        -1.396  -1.421  -1.331  -1.256  -1.304  -1.173  -1.175  -1.186  -1.058
330   Q        -0.426  -0.368  -0.368  -0.513  -0.417  -0.430  -0.625  -0.540  -0.540
331   E        -1.072  -1.041  -0.939  -1.086  -1.025  -0.882  -1.075  -1.033  -0.894
332   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
333   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q03219
Output conservation file - output/Q03219
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
