1     M         2.107   2.114   2.165   2.396   2.407   2.490   2.370   2.381   2.461
2     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
3     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
9     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
10    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
11    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
12    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
13    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
14    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
15    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
16    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
17    P         0.930   0.862   0.869   0.978   0.859   0.852   0.798   0.671   0.663
18    K        -0.795  -0.786  -0.750  -0.857  -0.853  -0.785  -0.773  -0.762  -0.710
19    V        -0.069  -0.098  -0.079  -0.336  -0.398  -0.364  -0.249  -0.291  -0.264
20    I        -0.069  -0.105  -0.086  -0.294  -0.352  -0.324  -0.249  -0.301  -0.274
21    L        -0.069  -0.098  -0.079  -0.128  -0.161  -0.130  -0.249  -0.291  -0.264
22    E        -0.795  -0.786  -0.750  -0.789  -0.768  -0.715  -0.773  -0.762  -0.710
23    S         0.118   0.114   0.027   0.112   0.108  -0.029   0.023   0.018  -0.111
24    H        -0.681  -0.661  -0.679  -0.512  -0.484  -0.507  -0.647  -0.622  -0.632
25    S        -0.681  -0.693  -0.697  -0.779  -0.796  -0.804  -0.647  -0.659  -0.653
26    K        -0.681  -0.665  -0.666  -0.767  -0.739  -0.748  -0.647  -0.627  -0.617
27    P        -1.262  -1.260  -1.219  -1.087  -1.086  -1.016  -0.983  -0.979  -0.922
28    T        -0.681  -0.665  -0.666  -0.725  -0.700  -0.696  -0.647  -0.627  -0.617
29    D        -0.101  -0.106  -0.096  -0.111  -0.116  -0.093  -0.312  -0.317  -0.295
30    S         0.118   0.114   0.027   0.103   0.101  -0.040   0.023   0.018  -0.111
31    V         1.060   1.054   0.971   0.981   0.971   0.823   1.029   1.019   0.854
32    F        -0.681  -0.692  -0.690  -0.586  -0.602  -0.596  -0.647  -0.658  -0.645
33    L         0.118   0.114   0.027   0.138   0.133   0.020   0.023   0.018  -0.111
34    Q        -0.681  -0.692  -0.690  -0.507  -0.522  -0.527  -0.647  -0.658  -0.645
35    P        -1.262  -1.260  -1.219  -1.040  -1.035  -0.969  -0.983  -0.979  -0.922
36    W         2.107   2.114   2.165   2.475   2.486   2.570   2.370   2.381   2.461
37    I        -0.101  -0.106  -0.096  -0.541  -0.549  -0.532  -0.312  -0.317  -0.295
38    K        -0.681  -0.692  -0.690  -0.717  -0.737  -0.743  -0.647  -0.658  -0.645
39    A        -1.262  -1.260  -1.219  -1.057  -1.056  -0.986  -0.983  -0.979  -0.922
40    L        -0.681  -0.670  -0.672  -0.685  -0.657  -0.663  -0.647  -0.633  -0.625
41    I        -0.101  -0.106  -0.079  -0.525  -0.530  -0.490  -0.312  -0.316  -0.275
42    E        -1.262  -1.260  -1.219  -1.324  -1.328  -1.254  -0.983  -0.979  -0.922
43    D        -1.262  -1.260  -1.219  -0.978  -0.972  -0.906  -0.983  -0.979  -0.922
44    N        -0.681  -0.665  -0.666  -0.645  -0.616  -0.612  -0.647  -0.627  -0.617
45    -         0.775   0.728   0.764   0.524   0.458   0.505   0.507   0.414   0.459
46    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
47    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
48    S         0.118   0.144   0.042   0.145   0.189   0.012   0.023   0.061  -0.090
49    E        -0.681  -0.692  -0.690  -0.636  -0.654  -0.663  -0.647  -0.658  -0.645
50    H        -0.681  -0.674  -0.700  -0.622  -0.615  -0.649  -0.647  -0.637  -0.657
51    D        -1.262  -1.260  -1.219  -1.070  -1.063  -0.999  -0.983  -0.979  -0.922
52    Q        -0.101  -0.106  -0.077  -0.104  -0.112  -0.062  -0.312  -0.317  -0.274
53    Y         0.118   0.095   0.041   0.205   0.163   0.057   0.023  -0.011  -0.091
54    H        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
55    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
56    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
57    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
58    G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
59    H        -0.192  -0.188  -0.145  -0.139  -0.132  -0.062  -0.424  -0.417  -0.358
60    V         0.775   0.756   0.767   0.464   0.422   0.428   0.507   0.469   0.466
61    I         0.118   0.108   0.053  -0.091  -0.107  -0.202   0.023   0.009  -0.074
62    P        -0.101  -0.107  -0.098  -0.156  -0.165  -0.148  -0.312  -0.318  -0.299
63    S        -0.681  -0.701  -0.676  -0.656  -0.683  -0.638  -0.647  -0.668  -0.629
64    L         1.060   1.048   0.968   0.968   0.950   0.817   1.029   1.008   0.848
65    T        -0.681  -0.674  -0.700  -0.936  -0.925  -0.962  -0.647  -0.637  -0.657
66    K         0.118   0.095   0.041   0.252   0.218   0.136   0.023  -0.011  -0.091
67    Q        -0.681  -0.674  -0.700  -0.509  -0.498  -0.526  -0.647  -0.637  -0.657
68    D         1.060   1.048   0.968   1.176   1.160   1.040   1.029   1.008   0.848
69    L        -0.681  -0.674  -0.700  -0.767  -0.752  -0.818  -0.647  -0.637  -0.657
70    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
71    A        -0.681  -0.671  -0.667  -0.734  -0.720  -0.709  -0.647  -0.634  -0.619
72    L        -0.681  -0.674  -0.700  -0.702  -0.685  -0.762  -0.647  -0.637  -0.657
73    P        -0.101  -0.103  -0.086  -0.219  -0.221  -0.197  -0.312  -0.313  -0.283
74    H        -1.262  -1.260  -1.219  -1.235  -1.238  -1.165  -0.983  -0.979  -0.922
75    M        -0.681  -0.665  -0.666  -0.794  -0.776  -0.765  -0.647  -0.627  -0.617
76    S         0.118   0.099   0.045   0.162   0.139   0.061   0.023  -0.004  -0.085
77    P        -1.262  -1.260  -1.219  -1.160  -1.161  -1.089  -0.983  -0.979  -0.922
78    T        -0.681  -0.701  -0.676  -0.636  -0.666  -0.624  -0.647  -0.668  -0.629
79    I        -0.681  -0.693  -0.697  -0.876  -0.894  -0.890  -0.647  -0.659  -0.653
80    L        -0.192  -0.188  -0.145  -0.382  -0.370  -0.306  -0.424  -0.417  -0.358
81    T        -0.192  -0.188  -0.145  -0.262  -0.250  -0.185  -0.424  -0.417  -0.358
82    N         0.775   0.756   0.767   0.731   0.696   0.711   0.507   0.469   0.466
83    P         0.775   0.773   0.774   0.741   0.735   0.727   0.507   0.502   0.479
84    C        -0.192  -0.188  -0.145  -0.120  -0.120  -0.043  -0.424  -0.417  -0.358
85    H         0.775   0.756   0.767   0.848   0.813   0.818   0.507   0.469   0.466
86    F         0.698   0.700   0.738   0.407   0.406   0.460   0.358   0.359   0.409
87    A        -0.101  -0.075  -0.090  -0.367  -0.336  -0.332  -0.312  -0.281  -0.288
88    K         0.698   0.711   0.742   0.621   0.642   0.687   0.358   0.381   0.415
89    I         2.107   2.114   2.165   1.953   1.965   2.045   2.370   2.381   2.461
90    T        -0.101  -0.107  -0.098  -0.382  -0.393  -0.378  -0.312  -0.318  -0.299
91    K         1.060   1.066   0.977   1.193   1.203   1.073   1.029   1.039   0.865
92    F         2.107   2.114   2.165   2.200   2.209   2.293   2.370   2.381   2.461
93    Y        -1.262  -1.260  -1.219  -1.135  -1.132  -1.065  -0.983  -0.979  -0.922
94    N        -1.262  -1.260  -1.219  -1.024  -1.017  -0.952  -0.983  -0.979  -0.922
95    V         0.698   0.700   0.738   0.419   0.420   0.479   0.358   0.359   0.409
96    C        -0.681  -0.674  -0.700  -0.493  -0.485  -0.501  -0.647  -0.637  -0.657
97    D         0.118   0.109   0.054   0.186   0.172   0.080   0.023   0.011  -0.072
98    Y         0.698   0.700   0.738   0.561   0.562   0.616   0.358   0.359   0.409
99    K        -0.101  -0.107  -0.076  -0.278  -0.285  -0.235  -0.312  -0.317  -0.271
100   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
101   V         0.118   0.114   0.027  -0.056  -0.065  -0.238   0.023   0.018  -0.111
102   Y         0.698   0.700   0.738   0.603   0.604   0.661   0.358   0.359   0.409
103   A         2.107   2.114   2.165   2.295   2.306   2.389   2.370   2.381   2.461
104   S        -0.681  -0.693  -0.697  -0.904  -0.921  -0.947  -0.647  -0.659  -0.653
105   I        -0.101  -0.106  -0.096  -0.541  -0.549  -0.532  -0.312  -0.317  -0.295
106   R        -0.681  -0.692  -0.690  -0.572  -0.591  -0.593  -0.647  -0.658  -0.645
107   D         2.107   2.114   2.165   2.193   2.203   2.286   2.370   2.381   2.461
108   S         2.107   2.114   2.165   2.088   2.102   2.181   2.370   2.381   2.461
109   S         0.118   0.144   0.042   0.171   0.217   0.048   0.023   0.061  -0.090
110   H         1.060   1.047   0.968   1.361   1.346   1.224   1.029   1.006   0.848
111   Q        -0.681  -0.693  -0.697  -0.608  -0.631  -0.654  -0.647  -0.659  -0.653
112   I         1.060   1.066   0.977   0.890   0.900   0.755   1.029   1.039   0.865
113   L         0.118   0.114   0.027  -0.042  -0.050  -0.207   0.023   0.018  -0.111
114   V        -0.681  -0.674  -0.700  -0.545  -0.525  -0.582  -0.647  -0.637  -0.657
115   E        -0.681  -0.674  -0.700  -0.717  -0.705  -0.714  -0.647  -0.637  -0.657
116   F         2.107   2.114   2.165   2.200   2.209   2.293   2.370   2.381   2.461
117   S        -0.681  -0.661  -0.679  -0.743  -0.705  -0.745  -0.647  -0.622  -0.632
118   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
119   Q        -1.262  -1.260  -1.219  -1.125  -1.128  -1.054  -0.983  -0.979  -0.922
120   E        -0.681  -0.674  -0.700  -0.536  -0.525  -0.572  -0.647  -0.637  -0.657
121   C         0.698   0.700   0.738   0.822   0.824   0.882   0.358   0.359   0.409
122   V         0.698   0.700   0.738   0.295   0.295   0.349   0.358   0.359   0.409
123   S        -0.681  -0.693  -0.697  -0.964  -0.985  -1.016  -0.647  -0.659  -0.653
124   N        -0.101  -0.106  -0.079  -0.187  -0.192  -0.144  -0.312  -0.316  -0.275
125   F         1.060   1.047   0.968   1.188   1.169   1.053   1.029   1.006   0.848
126   E         2.107   2.114   2.165   2.268   2.279   2.362   2.370   2.381   2.461
127   R        -1.262  -1.260  -1.219  -1.343  -1.344  -1.273  -0.983  -0.979  -0.922
128   T        -0.681  -0.671  -0.667  -0.679  -0.664  -0.666  -0.647  -0.634  -0.619
129   H        -0.101  -0.075  -0.090  -0.082  -0.051  -0.051  -0.312  -0.281  -0.288
130   N        -0.681  -0.692  -0.690  -0.545  -0.559  -0.547  -0.647  -0.658  -0.645
131   C        -0.681  -0.674  -0.700  -0.435  -0.427  -0.472  -0.647  -0.637  -0.657
132   R         2.107   2.114   2.165   2.282   2.290   2.375   2.370   2.381   2.461
133   I         1.060   1.054   0.971   0.974   0.968   0.858   1.029   1.019   0.854
134   T         2.107   2.114   2.165   2.165   2.177   2.258   2.370   2.381   2.461
135   S        -0.101  -0.107  -0.098  -0.266  -0.272  -0.269  -0.312  -0.318  -0.299
136   E        -0.681  -0.664  -0.670  -0.556  -0.530  -0.530  -0.647  -0.626  -0.622
137   T         2.107   2.114   2.165   2.165   2.177   2.258   2.370   2.381   2.461
138   T        -1.262  -1.260  -1.219  -1.249  -1.250  -1.179  -0.983  -0.979  -0.922
139   N         1.060   1.054   0.971   1.118   1.111   0.971   1.029   1.019   0.854
140   C        -0.101  -0.097  -0.080  -0.068  -0.064  -0.032  -0.312  -0.306  -0.276
141   L         2.107   2.114   2.165   2.032   2.042   2.124   2.370   2.381   2.461
142   M        -0.101  -0.075  -0.090  -0.293  -0.263  -0.246  -0.312  -0.281  -0.288
143   I        -1.262  -1.260  -1.219  -1.301  -1.288  -1.231  -0.983  -0.979  -0.922
144   I         2.107   2.114   2.165   1.953   1.965   2.045   2.370   2.381   2.461
145   G         0.118   0.114   0.027   0.465   0.461   0.318   0.023   0.018  -0.111
146   D        -0.681  -0.693  -0.697  -0.594  -0.613  -0.614  -0.647  -0.659  -0.653
147   A         1.060   1.047   0.968   1.230   1.210   1.075   1.029   1.006   0.848
148   D        -0.681  -0.674  -0.700  -0.668  -0.655  -0.701  -0.647  -0.637  -0.657
149   L         2.107   2.114   2.165   2.032   2.042   2.124   2.370   2.381   2.461
150   V        -1.262  -1.260  -1.219  -1.007  -0.996  -0.936  -0.983  -0.979  -0.922
151   Y         0.118   0.144   0.042   0.149   0.185   0.012   0.023   0.061  -0.090
152   V        -0.101  -0.106  -0.077  -0.043  -0.040   0.014  -0.312  -0.317  -0.273
153   T        -0.681  -0.670  -0.672  -0.723  -0.705  -0.713  -0.647  -0.633  -0.625
154   N        -0.681  -0.701  -0.676  -0.628  -0.658  -0.616  -0.647  -0.668  -0.629
155   S        -0.681  -0.696  -0.670  -0.749  -0.769  -0.729  -0.647  -0.662  -0.622
156   R         0.118   0.149   0.065   0.276   0.322   0.189   0.023   0.068  -0.057
157   A        -0.681  -0.671  -0.667  -0.673  -0.658  -0.639  -0.647  -0.634  -0.619
158   M        -0.681  -0.664  -0.670  -0.531  -0.509  -0.506  -0.647  -0.626  -0.622
159   S        -1.262  -1.260  -1.219  -1.235  -1.223  -1.165  -0.983  -0.979  -0.922
160   H        -1.262  -1.260  -1.219  -0.755  -0.749  -0.682  -0.983  -0.979  -0.922
161   F         0.118   0.114   0.027   0.311   0.305   0.190   0.023   0.018  -0.111
162   K         0.118   0.143   0.050   0.406   0.446   0.286   0.023   0.059  -0.078
163   I        -0.681  -0.701  -0.676  -0.720  -0.743  -0.692  -0.647  -0.668  -0.629
164   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
165   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
166   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
167   C        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
168   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
169   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
170   N        -0.681  -0.693  -0.697  -0.668  -0.686  -0.695  -0.647  -0.659  -0.653
171   I        -0.681  -0.701  -0.676  -0.788  -0.811  -0.765  -0.647  -0.668  -0.629
172   S        -1.262  -1.260  -1.219  -1.235  -1.227  -1.165  -0.983  -0.979  -0.922
173   S        -0.101  -0.075  -0.075  -0.073  -0.030  -0.033  -0.312  -0.281  -0.271
174   K        -1.262  -1.260  -1.219  -1.001  -0.995  -0.929  -0.983  -0.979  -0.922
175   E        -1.262  -1.260  -1.219  -1.257  -1.255  -1.187  -0.983  -0.979  -0.922
176   I        -1.262  -1.260  -1.219  -1.101  -1.083  -1.030  -0.983  -0.979  -0.922
177   V         0.698   0.695   0.725   0.295   0.283   0.315   0.358   0.350   0.381
178   P         0.698   0.700   0.738   0.676   0.678   0.738   0.358   0.359   0.409
179   V         1.060   1.048   0.968   1.065   1.048   0.932   1.029   1.008   0.848
180   L         2.107   2.114   2.165   2.032   2.042   2.124   2.370   2.381   2.461
181   N        -0.681  -0.674  -0.700  -0.685  -0.674  -0.738  -0.647  -0.637  -0.657
182   V         0.698   0.693   0.729   0.295   0.279   0.327   0.358   0.346   0.391
183   N        -0.101  -0.107  -0.098  -0.301  -0.310  -0.281  -0.312  -0.318  -0.299
184   Q        -0.681  -0.693  -0.697  -0.504  -0.523  -0.536  -0.647  -0.659  -0.653
185   A         0.118   0.114   0.027   0.235   0.228   0.066   0.023   0.018  -0.111
186   T        -1.262  -1.260  -1.219  -1.115  -1.110  -1.044  -0.983  -0.979  -0.922
187   I         1.060   1.047   0.968   0.974   0.958   0.853   1.029   1.006   0.848
188   F         1.060   1.048   0.968   1.125   1.105   0.968   1.029   1.008   0.848
189   D         0.118   0.114   0.027   0.231   0.224   0.091   0.023   0.018  -0.111
190   I        -0.681  -0.670  -0.672  -0.628  -0.602  -0.621  -0.647  -0.633  -0.625
191   D         2.107   2.114   2.165   2.193   2.203   2.286   2.370   2.381   2.461
192   Q         2.107   2.114   2.165   2.329   2.340   2.423   2.370   2.381   2.461
193   V        -0.101  -0.103  -0.086  -0.426  -0.430  -0.392  -0.312  -0.313  -0.283
194   G        -0.681  -0.664  -0.670  -0.523  -0.501  -0.487  -0.647  -0.626  -0.622
195   S        -0.681  -0.692  -0.690  -0.758  -0.772  -0.771  -0.647  -0.658  -0.645
196   L        -1.262  -1.260  -1.219  -1.271  -1.265  -1.202  -0.983  -0.979  -0.922
197   S        -0.681  -0.670  -0.672  -0.794  -0.772  -0.779  -0.647  -0.633  -0.625
198   T        -1.262  -1.260  -1.219  -1.087  -1.077  -1.016  -0.983  -0.979  -0.922
199   F        -0.101  -0.106  -0.096  -0.380  -0.389  -0.360  -0.312  -0.317  -0.295
200   P         0.698   0.711   0.742   0.655   0.678   0.723   0.358   0.381   0.415
201   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
202   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
203   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
204   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
205   F        -0.681  -0.693  -0.697  -0.553  -0.568  -0.569  -0.647  -0.659  -0.653
206   V         1.060   1.066   0.977   0.981   0.990   0.835   1.029   1.039   0.865
207   Y         2.107   2.114   2.165   2.288   2.299   2.382   2.370   2.381   2.461
208   K        -0.681  -0.664  -0.670  -0.550  -0.522  -0.525  -0.647  -0.626  -0.622
209   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
210   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
211   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
212   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
213   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
214   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
215   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
216   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
217   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
218   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
219   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
220   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
221   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
222   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
223   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
224   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
225   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
226   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
227   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
228   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
229   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
230   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
231   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
232   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
233   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
234   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
235   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
236   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
237   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
238   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
239   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
240   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
241   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
242   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
243   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
244   Y        -0.681  -0.693  -0.697  -0.625  -0.645  -0.666  -0.647  -0.659  -0.653
245   L         0.698   0.711   0.740   0.234   0.255   0.294   0.358   0.380   0.412
246   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
247   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q03096
Output conservation file - output/Q03096
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
