1     M         1.507   1.547   1.617   1.697   1.754   1.866   1.649   1.708   1.824
2     F        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
3     L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
9     I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
10    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
11    L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
12    N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
13    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
14    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
15    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
16    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
17    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
18    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
19    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
20    R        -0.161  -0.161  -0.206  -0.076  -0.122  -0.173  -0.336  -0.355  -0.422
21    R         0.628   0.743   0.541   0.704   0.878   0.530   0.514   0.700   0.298
22    L        -0.831  -0.735  -0.719  -0.918  -0.764  -0.787  -0.903  -0.786  -0.755
23    F        -0.831  -0.761  -0.730  -0.923  -0.797  -0.771  -0.903  -0.824  -0.767
24    R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
25    T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
26    M        -1.232  -1.227  -1.130  -1.118  -1.155  -1.023  -1.108  -1.091  -0.963
27    S        -1.232  -1.132  -1.095  -1.221  -1.085  -1.022  -1.108  -0.995  -0.931
28    T        -1.638  -1.567  -1.451  -1.382  -1.271  -1.124  -1.305  -1.229  -1.087
29    V        -1.638  -1.567  -1.451  -1.708  -1.617  -1.441  -1.305  -1.229  -1.087
30    K         0.716   0.582   0.557   0.699   0.497   0.433   0.664   0.418   0.330
31    G        -1.116  -1.181  -1.081  -0.932  -1.008  -0.859  -1.010  -1.051  -0.922
32    K        -1.116  -1.190  -1.108  -1.097  -1.214  -1.078  -1.010  -1.060  -0.945
33    P         0.216   0.189  -0.053   0.339   0.304  -0.083   0.209   0.169  -0.196
34    E        -1.420  -1.487  -1.426  -1.208  -1.273  -1.141  -1.120  -1.166  -1.068
35    D        -1.535  -1.474  -1.409  -1.540  -1.454  -1.366  -1.231  -1.166  -1.057
36    A         0.216   0.034  -0.090   0.342   0.074  -0.120   0.209  -0.054  -0.251
37    K         0.845   0.717   0.631   0.869   0.703   0.562   0.873   0.656   0.471
38    I        -0.393  -0.331  -0.254  -0.748  -0.647  -0.544  -0.677  -0.596  -0.491
39    I        -0.812  -0.729  -0.711  -1.063  -0.952  -0.905  -0.899  -0.811  -0.752
40    E        -0.697  -0.593  -0.654  -0.822  -0.705  -0.743  -0.788  -0.671  -0.692
41    A        -1.839  -1.749  -1.688  -1.773  -1.666  -1.566  -1.342  -1.258  -1.153
42    R        -0.697  -0.557  -0.652  -0.829  -0.636  -0.727  -0.788  -0.641  -0.690
43    H        -0.926  -0.810  -1.001  -0.652  -0.510  -0.752  -0.788  -0.655  -0.839
44    V         0.308   0.402   0.463  -0.092   0.069   0.158  -0.087   0.077   0.145
45    K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
46    E         0.325   0.340   0.431   0.002  -0.007   0.133  -0.053  -0.047   0.079
47    T        -0.161  -0.274  -0.228  -0.111  -0.307  -0.250  -0.336  -0.508  -0.453
48    S        -0.622  -0.637  -0.688  -0.551  -0.599  -0.684  -0.677  -0.709  -0.727
49    D        -1.420  -1.402  -1.399  -1.244  -1.212  -1.250  -1.120  -1.094  -1.047
50    C        -0.622  -0.739  -0.697  -0.381  -0.562  -0.541  -0.677  -0.794  -0.733
51    K         1.507   1.547   1.617   1.457   1.524   1.634   1.649   1.708   1.824
52    W         1.507   1.547   1.617   1.767   1.826   1.934   1.649   1.708   1.824
53    I         0.216   0.189  -0.053   0.296   0.267  -0.111   0.209   0.169  -0.196
54    G        -1.116  -1.190  -1.108  -1.009  -1.122  -1.009  -1.010  -1.060  -0.945
55    L         0.346   0.391   0.448   0.021   0.089   0.175  -0.013   0.056   0.114
56    Q        -0.812  -0.711  -0.705  -0.870  -0.728  -0.731  -0.899  -0.788  -0.745
57    K         0.845   0.717   0.631   0.886   0.729   0.600   0.873   0.656   0.471
58    I         0.520   0.617   0.514   0.365   0.532   0.305   0.319   0.480   0.246
59    I        -1.535  -1.530  -1.432  -1.289  -1.247  -1.124  -1.231  -1.206  -1.074
60    Y         0.845   0.807   0.645   1.165   1.128   0.909   0.873   0.807   0.497
61    K        -1.116  -1.157  -1.082  -1.132  -1.204  -1.096  -1.010  -1.033  -0.923
62    D         1.507   1.547   1.617   1.537   1.604   1.711   1.649   1.708   1.824
63    P         0.216   0.034  -0.090   0.349   0.088  -0.127   0.209  -0.054  -0.251
64    N        -0.926  -1.033  -1.051  -0.717  -0.903  -0.976  -0.788  -0.897  -0.889
65    G         1.507   1.547   1.617   1.542   1.607   1.716   1.649   1.708   1.824
66    K         0.346   0.416   0.457   0.127   0.248   0.294  -0.013   0.104   0.132
67    E        -1.839  -1.828  -1.709  -1.795  -1.771  -1.585  -1.342  -1.312  -1.166
68    R         1.507   1.547   1.617   1.592   1.655   1.764   1.649   1.708   1.824
69    E        -1.116  -1.164  -1.079  -1.217  -1.283  -1.150  -1.010  -1.032  -0.918
70    W         1.507   1.547   1.617   1.767   1.826   1.934   1.649   1.708   1.824
71    D         0.346   0.468   0.501   0.010   0.211   0.259  -0.013   0.205   0.220
72    S        -0.697  -0.731  -0.693  -0.552  -0.592  -0.512  -0.788  -0.802  -0.730
73    A         1.507   1.547   1.617   1.504   1.558   1.679   1.649   1.708   1.824
74    V        -0.812  -0.829  -0.728  -1.035  -1.076  -0.922  -0.899  -0.902  -0.769
75    R         1.507   1.547   1.617   1.592   1.655   1.764   1.649   1.708   1.824
76    T        -0.926  -0.876  -1.013  -0.739  -0.706  -0.896  -0.788  -0.736  -0.851
77    T         1.507   1.547   1.617   1.522   1.571   1.696   1.649   1.708   1.824
78    R         1.507   1.547   1.617   1.592   1.655   1.764   1.649   1.708   1.824
79    S         0.845   0.891   0.654   0.977   1.050   0.693   0.873   0.940   0.513
80    S        -0.697  -0.605  -0.652  -0.855  -0.748  -0.758  -0.788  -0.686  -0.692
81    G        -0.622  -0.739  -0.697  -0.589  -0.774  -0.721  -0.677  -0.794  -0.733
82    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
83    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
84    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
85    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
86    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
87    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
88    G        -0.812  -0.730  -0.714  -0.887  -0.764  -0.754  -0.899  -0.812  -0.754
89    V         0.346   0.406   0.462   0.065   0.168   0.235  -0.013   0.084   0.141
90    D         1.507   1.547   1.617   1.537   1.604   1.711   1.649   1.708   1.824
91    G         0.346   0.336   0.431   0.153   0.105   0.253  -0.013  -0.055   0.078
92    I         0.520   0.665   0.572   0.385   0.613   0.446   0.319   0.566   0.358
93    G        -0.203  -0.180  -0.186  -0.316  -0.300  -0.272  -0.456  -0.429  -0.406
94    I         0.845   0.717   0.631   0.910   0.761   0.638   0.873   0.656   0.471
95    L        -0.073  -0.160  -0.161  -0.195  -0.288  -0.294  -0.234  -0.343  -0.361
96    T        -0.377  -0.405  -0.588  -0.199  -0.253  -0.514  -0.345  -0.388  -0.600
97    I         0.845   0.904   0.660   0.864   0.956   0.583   0.873   0.960   0.524
98    L         0.845   0.807   0.645   0.788   0.750   0.500   0.873   0.807   0.497
99    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
100   K        -0.735  -0.751  -0.715  -0.811  -0.853  -0.787  -0.811  -0.825  -0.753
101   Y        -1.116  -1.018  -1.069  -0.775  -0.638  -0.733  -1.010  -0.891  -0.908
102   K        -1.420  -1.324  -1.360  -1.332  -1.197  -1.289  -1.120  -1.019  -1.014
103   D        -0.622  -0.686  -0.686  -0.542  -0.625  -0.635  -0.677  -0.739  -0.720
104   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
105   K        -0.518  -0.657  -0.674  -0.442  -0.643  -0.686  -0.521  -0.691  -0.702
106   P        -0.622  -0.593  -0.671  -0.591  -0.559  -0.679  -0.677  -0.644  -0.707
107   D        -0.393  -0.325  -0.231  -0.623  -0.512  -0.377  -0.677  -0.580  -0.458
108   E         0.216   0.034  -0.090   0.247   0.005  -0.145   0.209  -0.054  -0.251
109   I        -0.073  -0.199  -0.179  -0.159  -0.354  -0.349  -0.234  -0.403  -0.392
110   L        -0.203  -0.263  -0.183  -0.499  -0.568  -0.449  -0.456  -0.507  -0.403
111   L         0.845   0.807   0.645   0.832   0.805   0.598   0.873   0.807   0.497
112   Q        -0.073  -0.095  -0.171  -0.017  -0.098  -0.217  -0.234  -0.289  -0.381
113   K         0.845   0.717   0.631   0.864   0.699   0.550   0.873   0.656   0.471
114   Q         1.507   1.547   1.617   1.617   1.676   1.789   1.649   1.708   1.824
115   F         0.845   0.717   0.631   1.091   0.937   0.810   0.873   0.656   0.471
116   R         1.507   1.547   1.617   1.592   1.655   1.764   1.649   1.708   1.824
117   P         1.507   1.547   1.617   1.522   1.579   1.696   1.649   1.708   1.824
118   P         1.507   1.547   1.617   1.522   1.579   1.696   1.649   1.708   1.824
119   V        -0.377  -0.532  -0.630  -0.242  -0.463  -0.615  -0.345  -0.538  -0.651
120   E        -0.318  -0.348  -0.254  -0.589  -0.641  -0.487  -0.567  -0.612  -0.491
121   G        -0.622  -0.682  -0.690  -0.586  -0.702  -0.707  -0.677  -0.747  -0.729
122   V        -0.377  -0.528  -0.631  -0.212  -0.411  -0.561  -0.345  -0.533  -0.652
123   C        -0.073  -0.160  -0.161   0.110  -0.024  -0.074  -0.234  -0.343  -0.361
124   I         0.845   0.717   0.631   0.875   0.708   0.558   0.873   0.656   0.471
125   E         1.507   1.547   1.617   1.361   1.416   1.541   1.649   1.708   1.824
126   M        -0.812  -0.860  -0.732  -0.804  -0.865  -0.694  -0.899  -0.930  -0.772
127   P         1.507   1.547   1.617   1.522   1.579   1.696   1.649   1.708   1.824
128   A         1.507   1.547   1.617   1.504   1.558   1.679   1.649   1.708   1.824
129   G         1.507   1.547   1.617   1.542   1.607   1.716   1.649   1.708   1.824
130   L         1.507   1.547   1.617   1.383   1.450   1.561   1.649   1.708   1.824
131   I        -0.073  -0.058  -0.152  -0.185  -0.169  -0.349  -0.234  -0.221  -0.353
132   D         1.507   1.547   1.617   1.537   1.604   1.711   1.649   1.708   1.824
133   A        -1.116  -1.119  -1.080  -1.038  -1.032  -0.969  -1.010  -0.993  -0.918
134   G        -0.393  -0.365  -0.257  -0.569  -0.528  -0.377  -0.677  -0.637  -0.496
135   E         1.507   1.547   1.617   1.361   1.416   1.541   1.649   1.708   1.824
136   D        -0.318  -0.268  -0.219  -0.416  -0.351  -0.292  -0.567  -0.503  -0.443
137   I        -0.622  -0.737  -0.677  -0.626  -0.778  -0.687  -0.677  -0.792  -0.713
138   D         0.520   0.665   0.572   0.311   0.530   0.382   0.319   0.566   0.358
139   T        -0.622  -0.739  -0.697  -0.556  -0.724  -0.660  -0.677  -0.794  -0.733
140   A        -0.073  -0.020  -0.138  -0.057   0.010  -0.130  -0.234  -0.158  -0.327
141   A         1.507   1.547   1.617   1.504   1.558   1.679   1.649   1.708   1.824
142   L        -0.812  -0.801  -0.728  -1.122  -1.107  -0.997  -0.899  -0.881  -0.769
143   R         1.507   1.547   1.617   1.592   1.655   1.764   1.649   1.708   1.824
144   E         1.507   1.547   1.617   1.361   1.416   1.541   1.649   1.708   1.824
145   L         0.845   0.717   0.631   0.816   0.665   0.542   0.873   0.656   0.471
146   K        -0.812  -0.766  -0.711  -0.984  -0.906  -0.835  -0.899  -0.837  -0.751
147   E         1.507   1.547   1.617   1.361   1.416   1.541   1.649   1.708   1.824
148   E         1.507   1.547   1.617   1.361   1.416   1.541   1.649   1.708   1.824
149   T         1.507   1.547   1.617   1.522   1.571   1.696   1.649   1.708   1.824
150   G         1.507   1.547   1.617   1.542   1.607   1.716   1.649   1.708   1.824
151   Y         1.507   1.547   1.617   1.717   1.777   1.886   1.649   1.708   1.824
152   S        -1.420  -1.357  -1.380  -1.180  -1.107  -1.110  -1.120  -1.055  -1.031
153   G         0.216   0.119  -0.071   0.426   0.312   0.041   0.209   0.061  -0.223
154   K        -0.203  -0.280  -0.202  -0.399  -0.512  -0.382  -0.456  -0.536  -0.427
155   I        -0.812  -0.791  -0.727  -0.917  -0.900  -0.790  -0.899  -0.869  -0.767
156   I        -1.839  -1.710  -1.685  -1.686  -1.468  -1.469  -1.342  -1.224  -1.151
157   S        -1.116  -1.132  -1.067  -0.883  -0.917  -0.814  -1.010  -1.009  -0.909
158   K        -1.535  -1.468  -1.415  -1.549  -1.440  -1.366  -1.231  -1.154  -1.061
159   S         0.290   0.329   0.430   0.068   0.119   0.284  -0.124  -0.070   0.077
160   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
161   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
162   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
163   P        -0.377  -0.387  -0.606  -0.220  -0.242  -0.595  -0.345  -0.353  -0.622
164   T        -1.116  -1.038  -1.058  -1.152  -1.060  -1.066  -1.010  -0.930  -0.902
165   V        -1.116  -1.116  -1.073  -1.048  -1.033  -0.988  -1.010  -1.002  -0.915
166   F        -0.377  -0.518  -0.626  -0.059  -0.270  -0.456  -0.345  -0.522  -0.645
167   N        -0.073  -0.160  -0.161  -0.001  -0.121  -0.157  -0.234  -0.343  -0.361
168   D         1.507   1.547   1.617   1.537   1.604   1.711   1.649   1.708   1.824
169   P         1.507   1.547   1.617   1.522   1.579   1.696   1.649   1.708   1.824
170   G         1.507   1.547   1.617   1.542   1.607   1.716   1.649   1.708   1.824
171   F         0.290   0.348   0.444   0.026   0.099   0.248  -0.124  -0.032   0.106
172   T         0.216   0.108  -0.081   0.406   0.248   0.009   0.209   0.046  -0.238
173   N         1.507   1.547   1.617   1.594   1.664   1.767   1.649   1.708   1.824
174   T         0.346   0.369   0.443   0.135   0.145   0.264  -0.013   0.012   0.103
175   N         1.507   1.547   1.617   1.594   1.664   1.767   1.649   1.708   1.824
176   L         0.290   0.337   0.438   0.062   0.156   0.315  -0.124  -0.054   0.093
177   C        -1.230  -1.136  -1.101  -1.181  -1.093  -1.014  -1.120  -1.022  -0.940
178   L        -0.073  -0.194  -0.175  -0.203  -0.358  -0.342  -0.234  -0.396  -0.386
179   V        -0.203  -0.230  -0.197  -0.406  -0.450  -0.381  -0.456  -0.481  -0.421
180   T        -0.622  -0.628  -0.672  -0.494  -0.518  -0.555  -0.677  -0.670  -0.704
181   V         0.346   0.408   0.461   0.081   0.174   0.252  -0.013   0.088   0.140
182   E        -0.697  -0.609  -0.676  -0.857  -0.737  -0.802  -0.788  -0.690  -0.715
183   V         0.520   0.562   0.494   0.385   0.445   0.297   0.319   0.381   0.205
184   D         0.845   0.717   0.631   0.962   0.805   0.666   0.873   0.656   0.471
185   M         0.290   0.337   0.438   0.062   0.114   0.273  -0.124  -0.054   0.093
186   S        -0.622  -0.681  -0.684  -0.541  -0.634  -0.657  -0.677  -0.735  -0.720
187   L        -0.812  -0.861  -0.730  -1.086  -1.162  -0.961  -0.899  -0.930  -0.771
188   P         0.520   0.468   0.467   0.411   0.288   0.238   0.319   0.204   0.153
189   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
190   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
191   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
192   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
193   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
194   E         0.520   0.563   0.502   0.284   0.344   0.219   0.319   0.383   0.221
195   N         0.845   0.717   0.631   1.012   0.852   0.702   0.873   0.656   0.471
196   Q        -0.073  -0.093  -0.171  -0.030  -0.101  -0.242  -0.234  -0.286  -0.382
197   K        -0.926  -0.929  -1.030  -0.717  -0.746  -0.937  -0.788  -0.791  -0.868
198   P         1.507   1.547   1.617   1.522   1.579   1.696   1.649   1.708   1.824
199   V        -0.697  -0.724  -0.681  -0.779  -0.819  -0.751  -0.788  -0.794  -0.717
200   T        -0.812  -0.720  -0.709  -0.845  -0.726  -0.678  -0.899  -0.802  -0.748
201   Q        -0.318  -0.271  -0.213  -0.477  -0.413  -0.353  -0.567  -0.508  -0.434
202   L         0.845   0.717   0.631   0.797   0.633   0.498   0.873   0.656   0.471
203   E         0.845   0.807   0.645   0.778   0.731   0.505   0.873   0.807   0.497
204   D        -0.697  -0.741  -0.673  -0.872  -0.925  -0.811  -0.788  -0.813  -0.711
205   N         0.290   0.348   0.444   0.100   0.196   0.339  -0.124  -0.032   0.106
206   E         1.507   1.547   1.617   1.361   1.416   1.541   1.649   1.708   1.824
207   F         0.216   0.034  -0.090   0.553   0.326   0.151   0.209  -0.054  -0.251
208   I         1.507   1.547   1.617   1.469   1.538   1.645   1.649   1.708   1.824
209   E         0.216   0.273  -0.040   0.192   0.269  -0.181   0.209   0.290  -0.176
210   C        -1.116  -1.185  -1.099  -0.837  -0.955  -0.848  -1.010  -1.057  -0.938
211   F         0.845   0.717   0.631   1.055   0.882   0.726   0.873   0.656   0.471
212   S        -0.622  -0.721  -0.670  -0.573  -0.727  -0.674  -0.677  -0.770  -0.705
213   V         0.216   0.184  -0.054   0.265   0.222  -0.165   0.209   0.163  -0.197
214   E         0.216   0.261  -0.039   0.322   0.379  -0.092   0.209   0.266  -0.176
215   L         0.845   0.717   0.631   0.823   0.675   0.559   0.873   0.656   0.471
216   H        -1.535  -1.478  -1.407  -1.447  -1.376  -1.250  -1.231  -1.165  -1.056
217   K        -1.535  -1.454  -1.403  -1.525  -1.419  -1.334  -1.231  -1.148  -1.053
218   F        -0.203  -0.066  -0.164  -0.329  -0.148  -0.227  -0.456  -0.268  -0.371
219   P        -1.420  -1.450  -1.413  -1.233  -1.271  -1.250  -1.120  -1.136  -1.058
220   D        -0.622  -0.502  -0.616  -0.705  -0.523  -0.663  -0.677  -0.511  -0.637
221   E        -0.926  -0.932  -1.029  -0.893  -0.912  -1.048  -0.788  -0.794  -0.867
222   M         0.290   0.348   0.444   0.062   0.125   0.279  -0.124  -0.032   0.106
223   V        -1.839  -1.749  -1.680  -1.655  -1.528  -1.432  -1.342  -1.254  -1.148
224   K        -0.622  -0.561  -0.630  -0.754  -0.643  -0.737  -0.677  -0.580  -0.654
225   L         0.216   0.103  -0.069   0.245   0.112  -0.143   0.209   0.040  -0.219
226   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
227   D        -0.926  -0.869  -0.749  -1.204  -1.136  -0.948  -1.010  -0.937  -0.788
228   Q        -1.116  -0.936  -1.049  -1.183  -0.913  -1.070  -1.010  -0.814  -0.892
229   Q        -0.203  -0.230  -0.197  -0.364  -0.438  -0.379  -0.456  -0.481  -0.421
230   G         0.216   0.103  -0.069   0.403   0.255  -0.003   0.209   0.040  -0.219
231   Y        -0.812  -0.860  -0.732  -0.536  -0.590  -0.411  -0.899  -0.930  -0.772
232   K        -0.622  -0.682  -0.690  -0.696  -0.812  -0.814  -0.677  -0.747  -0.729
233   L        -0.318  -0.350  -0.260  -0.638  -0.702  -0.567  -0.567  -0.615  -0.499
234   D         0.845   0.717   0.631   0.949   0.782   0.636   0.873   0.656   0.471
235   A         0.845   0.807   0.645   0.910   0.857   0.615   0.873   0.807   0.497
236   R         0.845   0.717   0.631   0.997   0.826   0.672   0.873   0.656   0.471
237   V         0.290   0.348   0.444  -0.117  -0.026   0.128  -0.124  -0.032   0.106
238   Q        -0.622  -0.739  -0.697  -0.394  -0.551  -0.493  -0.677  -0.794  -0.733
239   N        -0.203  -0.230  -0.197  -0.136  -0.161  -0.105  -0.456  -0.481  -0.421
240   V        -0.697  -0.619  -0.668  -0.748  -0.592  -0.688  -0.788  -0.683  -0.702
241   A         1.507   1.547   1.617   1.504   1.558   1.679   1.649   1.708   1.824
242   Q        -1.420  -1.487  -1.426  -1.191  -1.308  -1.270  -1.120  -1.166  -1.068
243   G         1.507   1.547   1.617   1.542   1.607   1.716   1.649   1.708   1.824
244   I        -0.622  -0.713  -0.686  -0.628  -0.752  -0.693  -0.677  -0.776  -0.723
245   L        -1.116  -0.965  -1.067  -1.150  -0.915  -1.070  -1.010  -0.873  -0.911
246   M        -0.377  -0.467  -0.611  -0.285  -0.415  -0.591  -0.345  -0.465  -0.628
247   A         0.845   0.807   0.645   0.922   0.873   0.642   0.873   0.807   0.497
248   K        -1.535  -1.530  -1.408  -1.434  -1.451  -1.257  -1.231  -1.207  -1.056
249   Q        -1.116  -1.087  -1.072  -0.996  -0.993  -0.954  -1.010  -0.976  -0.914
250   Y        -0.812  -0.839  -0.717  -0.885  -0.934  -0.733  -0.899  -0.906  -0.757
251   H        -1.638  -1.556  -1.451  -1.509  -1.423  -1.247  -1.305  -1.222  -1.087
252   I        -1.232  -1.237  -1.130  -1.241  -1.206  -1.093  -1.108  -1.100  -0.963
253   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
254   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
255   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
256   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
257   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
258   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
259   K        -1.318  -1.249  -1.139  -1.443  -1.371  -1.183  -1.187  -1.109  -0.971
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/Q01976
Output conservation file - output/Q01976
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
