1     M         1.732   1.740   1.802   1.937   1.949   2.048   1.911   1.931   2.031
2     L        -0.368  -0.271  -0.212  -0.322  -0.186  -0.102  -0.597  -0.473  -0.401
3     -        -1.305  -1.340  -1.244  -0.925  -1.008  -0.894  -1.076  -1.108  -0.988
4     I        -0.899  -0.842  -0.779  -0.753  -0.691  -0.587  -0.910  -0.851  -0.756
5     V        -0.753  -0.745  -0.762  -0.598  -0.602  -0.599  -0.753  -0.751  -0.740
6     L        -0.222  -0.247  -0.209  -0.253  -0.284  -0.220  -0.440  -0.458  -0.398
7     F        -0.753  -0.793  -0.761  -0.515  -0.577  -0.537  -0.753  -0.798  -0.739
8     L         1.732   1.740   1.802   1.748   1.758   1.864   1.911   1.931   2.031
9     T        -1.138  -1.215  -1.205  -0.879  -1.025  -1.032  -0.910  -0.991  -0.954
10    L        -0.753  -0.764  -0.763  -0.793  -0.797  -0.755  -0.753  -0.773  -0.741
11    F        -0.753  -0.652  -0.722  -0.594  -0.462  -0.542  -0.753  -0.645  -0.698
12    C        -0.855  -0.826  -0.781  -0.538  -0.453  -0.404  -0.862  -0.824  -0.756
13    S        -1.305  -1.343  -1.244  -1.162  -1.261  -1.122  -1.076  -1.110  -0.988
14    V        -0.117  -0.261  -0.227  -0.279  -0.512  -0.469  -0.239  -0.454  -0.415
15    V        -0.860  -0.912  -0.822  -1.050  -1.163  -1.008  -0.854  -0.916  -0.799
16    F        -0.321  -0.245  -0.220  -0.258  -0.124  -0.096  -0.547  -0.439  -0.404
17    R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
18    T        -0.291  -0.360  -0.277  -0.519  -0.676  -0.503  -0.489  -0.595  -0.484
19    A         0.934   0.890   0.730   1.079   1.012   0.777   0.971   0.899   0.603
20    Y        -1.284  -1.259  -1.208  -1.002  -0.995  -0.947  -1.067  -1.037  -0.956
21    C         0.934   0.890   0.730   0.975   0.926   0.746   0.971   0.899   0.603
22    D         1.732   1.740   1.802   1.754   1.780   1.870   1.911   1.931   2.031
23    V        -0.368  -0.290  -0.208  -0.315  -0.229  -0.108  -0.597  -0.503  -0.395
24    A        -0.899  -0.842  -0.779  -0.962  -0.926  -0.833  -0.910  -0.851  -0.756
25    I        -0.368  -0.270  -0.200  -0.345  -0.213  -0.117  -0.597  -0.472  -0.383
26    V         0.568   0.555   0.558   0.210   0.191   0.203   0.344   0.310   0.278
27    A        -0.753  -0.760  -0.759  -0.883  -0.914  -0.888  -0.753  -0.768  -0.737
28    P         1.732   1.740   1.802   1.737   1.737   1.853   1.911   1.931   2.031
29    E         0.182   0.148  -0.066   0.395   0.351   0.025   0.187   0.132  -0.183
30    P        -0.899  -0.843  -0.775  -1.032  -0.943  -0.844  -0.910  -0.852  -0.753
31    N         0.182   0.148  -0.066   0.386   0.340   0.046   0.187   0.132  -0.183
32    S        -0.899  -0.843  -0.775  -0.861  -0.786  -0.667  -0.910  -0.852  -0.753
33    V        -0.222  -0.215  -0.194  -0.675  -0.623  -0.561  -0.440  -0.421  -0.377
34    Y         0.568   0.543   0.541   0.656   0.610   0.571   0.344   0.289   0.245
35    D        -1.284  -1.280  -1.218  -1.478  -1.402  -1.347  -1.067  -1.057  -0.966
36    L         0.182   0.144  -0.054   0.244   0.188  -0.096   0.187   0.127  -0.165
37    S         0.934   0.840   0.720   0.851   0.733   0.561   0.971   0.817   0.584
38    G         0.182   0.100  -0.076   0.312   0.195  -0.098   0.187   0.063  -0.197
39    T         0.855   0.799   0.675   0.870   0.779   0.543   0.845   0.747   0.501
40    S        -0.855  -0.833  -0.773  -0.992  -0.971  -0.903  -0.862  -0.833  -0.747
41    Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
42    A         0.383   0.417   0.498   0.117   0.152   0.288  -0.009   0.044   0.159
43    V        -1.138  -1.215  -1.205  -1.094  -1.229  -1.191  -0.910  -0.991  -0.954
44    V         0.403   0.462   0.521   0.283   0.378   0.464   0.030   0.132   0.205
45    K        -0.222  -0.182  -0.188  -0.130  -0.088  -0.084  -0.440  -0.385  -0.371
46    V         0.568   0.508   0.526   0.574   0.461   0.473   0.344   0.222   0.214
47    K        -0.753  -0.793  -0.761  -0.731  -0.811  -0.807  -0.753  -0.798  -0.739
48    W         1.732   1.740   1.802   1.981   1.999   2.090   1.911   1.931   2.031
49    M        -1.138  -1.215  -1.205  -0.863  -0.964  -0.991  -0.910  -0.991  -0.954
50    H         0.182   0.148  -0.066   0.463   0.435   0.154   0.187   0.132  -0.183
51    T        -0.128  -0.132  -0.178  -0.298  -0.315  -0.437  -0.283  -0.301  -0.352
52    D        -0.753  -0.754  -0.758  -0.634  -0.637  -0.625  -0.753  -0.759  -0.736
53    N        -0.899  -0.852  -0.784  -0.999  -0.887  -0.832  -0.910  -0.859  -0.762
54    T        -0.753  -0.720  -0.731  -1.012  -0.950  -0.983  -0.753  -0.702  -0.699
55    P        -0.128   0.004  -0.098  -0.110   0.094  -0.051  -0.283  -0.082  -0.229
56    Q        -1.284  -1.300  -1.206  -1.105  -1.158  -1.028  -1.067  -1.074  -0.954
57    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
58    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
59    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
60    E        -0.753  -0.685  -0.704  -0.510  -0.409  -0.419  -0.753  -0.662  -0.669
61    K         0.403   0.462   0.521   0.241   0.354   0.424   0.030   0.132   0.205
62    D         0.182   0.170  -0.057   0.453   0.450   0.149   0.187   0.165  -0.169
63    F        -0.753  -0.797  -0.768  -0.596  -0.662  -0.639  -0.753  -0.803  -0.746
64    V        -1.284  -1.259  -1.208  -1.066  -1.057  -1.025  -1.067  -1.037  -0.956
65    R        -1.284  -1.259  -1.208  -1.074  -1.027  -0.961  -1.067  -1.037  -0.956
66    Y         0.182   0.104  -0.066   0.406   0.297   0.042   0.187   0.068  -0.183
67    T        -0.128  -0.013  -0.095  -0.397  -0.219  -0.324  -0.283  -0.104  -0.225
68    F        -0.222  -0.195  -0.207  -0.141  -0.100  -0.101  -0.440  -0.405  -0.397
69    T        -0.128  -0.179  -0.194  -0.438  -0.553  -0.571  -0.283  -0.370  -0.380
70    L         1.732   1.740   1.802   1.748   1.758   1.864   1.911   1.931   2.031
71    C         0.934   0.840   0.720   1.336   1.209   1.028   0.971   0.817   0.584
72    S         0.568   0.555   0.558   0.109   0.087   0.070   0.344   0.310   0.278
73    G         1.732   1.740   1.802   1.722   1.731   1.839   1.911   1.931   2.031
74    T        -0.128  -0.179  -0.194  -0.315  -0.461  -0.511  -0.283  -0.370  -0.380
75    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
76    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
77    N         0.568   0.568   0.544   0.684   0.678   0.598   0.344   0.334   0.250
78    A        -1.669  -1.687  -1.590  -1.668  -1.766  -1.646  -1.224  -1.235  -1.114
79    M        -0.513  -0.555  -0.702  -0.181  -0.224  -0.433  -0.440  -0.497  -0.666
80    I         0.934   0.840   0.720   1.092   0.968   0.792   0.971   0.817   0.584
81    E        -0.513  -0.594  -0.695  -0.022  -0.144  -0.300  -0.440  -0.546  -0.657
82    A        -0.368  -0.370  -0.276  -0.320  -0.378  -0.251  -0.597  -0.607  -0.483
83    M        -1.669  -1.687  -1.590  -1.467  -1.424  -1.248  -1.224  -1.235  -1.114
84    A        -1.138  -1.127  -1.140  -1.024  -1.000  -1.094  -0.910  -0.909  -0.892
85    T        -0.291  -0.261  -0.227  -0.663  -0.619  -0.556  -0.489  -0.456  -0.414
86    L         0.568   0.648   0.564   0.536   0.658   0.507   0.344   0.483   0.289
87    Q        -1.284  -1.292  -1.213  -0.957  -0.994  -0.883  -1.067  -1.067  -0.960
88    T        -1.138  -1.141  -1.140  -0.935  -0.990  -0.987  -0.910  -0.923  -0.892
89    L        -1.284  -1.280  -1.218  -0.988  -0.986  -0.879  -1.067  -1.057  -0.966
90    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
91    A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
92    S        -0.753  -0.720  -0.731  -0.968  -0.852  -0.843  -0.753  -0.702  -0.699
93    D        -1.138  -1.110  -1.138  -0.969  -0.957  -1.022  -0.910  -0.892  -0.891
94    L        -0.753  -0.801  -0.758  -0.636  -0.716  -0.644  -0.753  -0.804  -0.736
95    T        -0.753  -0.791  -0.758  -1.093  -1.128  -1.064  -0.753  -0.796  -0.736
96    D        -1.284  -1.270  -1.208  -1.302  -1.292  -1.257  -1.067  -1.048  -0.956
97    N        -1.138  -1.215  -1.205  -0.906  -1.025  -1.060  -0.910  -0.991  -0.954
98    E        -0.513  -0.555  -0.702  -0.416  -0.463  -0.657  -0.440  -0.497  -0.666
99    F        -0.753  -0.797  -0.768  -0.556  -0.615  -0.575  -0.753  -0.803  -0.746
100   N        -1.138  -1.215  -1.205  -1.111  -1.208  -1.126  -0.910  -0.991  -0.954
101   A         0.568   0.529   0.538   0.418   0.346   0.358   0.344   0.261   0.239
102   I        -0.513  -0.612  -0.697  -0.499  -0.661  -0.781  -0.440  -0.568  -0.660
103   I         0.182   0.174  -0.058   0.448   0.434   0.114   0.187   0.170  -0.171
104   E        -1.284  -1.250  -1.200  -1.173  -1.119  -1.069  -1.067  -1.029  -0.949
105   N        -0.128  -0.152  -0.181  -0.124  -0.153  -0.167  -0.283  -0.317  -0.360
106   T        -0.128  -0.140  -0.179  -0.406  -0.443  -0.484  -0.283  -0.314  -0.356
107   V        -1.669  -1.572  -1.565  -1.547  -1.463  -1.450  -1.224  -1.148  -1.096
108   G        -0.753  -0.669  -0.713  -0.635  -0.519  -0.594  -0.753  -0.643  -0.678
109   T        -0.513  -0.612  -0.697  -0.408  -0.595  -0.776  -0.440  -0.568  -0.660
110   D         0.568   0.543   0.541   0.684   0.635   0.592   0.344   0.289   0.245
111   G         1.732   1.740   1.802   1.722   1.731   1.839   1.911   1.931   2.031
112   V        -0.513  -0.453  -0.634  -0.267  -0.212  -0.471  -0.440  -0.379  -0.585
113   Y         1.732   1.740   1.802   1.771   1.785   1.887   1.911   1.931   2.031
114   F        -0.128  -0.212  -0.194  -0.095  -0.236  -0.238  -0.283  -0.401  -0.377
115   I        -0.222  -0.179  -0.187  -0.145  -0.087  -0.084  -0.440  -0.380  -0.368
116   Q         1.732   1.740   1.802   1.865   1.872   1.977   1.911   1.931   2.031
117   V        -0.753  -0.751  -0.714  -0.519  -0.524  -0.477  -0.753  -0.736  -0.680
118   F         0.934   0.890   0.730   1.100   1.049   0.838   0.971   0.899   0.603
119   A        -0.128   0.004  -0.098  -0.128   0.056  -0.073  -0.283  -0.082  -0.229
120   Q        -0.753  -0.819  -0.774  -1.003  -1.070  -0.965  -0.753  -0.823  -0.752
121   T        -0.753  -0.797  -0.768  -0.798  -0.886  -0.827  -0.753  -0.803  -0.746
122   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
123   A        -1.284  -1.259  -1.208  -1.153  -1.100  -1.089  -1.067  -1.037  -0.956
124   I        -1.284  -1.259  -1.208  -1.064  -1.022  -0.940  -1.067  -1.037  -0.956
125   G         1.732   1.740   1.802   1.722   1.731   1.839   1.911   1.931   2.031
126   Y        -0.128   0.049  -0.150  -0.226   0.048  -0.282  -0.283  -0.051  -0.315
127   T         0.568   0.729   0.692   0.109   0.382   0.314   0.344   0.626   0.533
128   I         1.732   1.740   1.802   1.786   1.797   1.900   1.911   1.931   2.031
129   H         0.568   0.729   0.692   0.782   1.035   0.967   0.344   0.626   0.533
130   Y         1.732   1.740   1.802   1.771   1.785   1.887   1.911   1.931   2.031
131   T         0.403   0.418   0.492  -0.197  -0.166  -0.050   0.030   0.048   0.149
132   N        -0.899  -0.849  -0.770  -0.793  -0.708  -0.601  -0.910  -0.855  -0.748
133   R         0.934   0.840   0.720   1.256   1.155   0.984   0.971   0.817   0.584
134   F         0.934   0.920   0.727   1.218   1.205   0.952   0.971   0.947   0.597
135   K        -0.128  -0.077  -0.104   0.012   0.108   0.074  -0.283  -0.192  -0.239
136   L         0.934   0.840   0.720   1.086   0.970   0.819   0.971   0.817   0.584
137   K        -0.222  -0.203  -0.195  -0.565  -0.553  -0.541  -0.440  -0.411  -0.381
138   G         1.732   1.740   1.802   1.722   1.731   1.839   1.911   1.931   2.031
139   M         0.934   0.840   0.720   1.242   1.117   0.933   0.971   0.817   0.584
140   I        -0.753  -0.776  -0.763  -0.859  -0.910  -0.933  -0.753  -0.783  -0.741
141   G         1.732   1.740   1.802   1.722   1.731   1.839   1.911   1.931   2.031
142   T        -1.284  -1.270  -1.208  -1.517  -1.540  -1.448  -1.067  -1.048  -0.956
143   K        -0.899  -0.852  -0.784  -1.216  -1.135  -1.027  -0.910  -0.859  -0.762
144   A        -1.284  -1.203  -1.184  -1.199  -1.121  -1.060  -1.067  -0.998  -0.938
145   A        -0.753  -0.764  -0.763  -1.030  -1.039  -0.984  -0.753  -0.773  -0.741
146   N        -1.284  -1.259  -1.208  -1.041  -1.015  -0.967  -1.067  -1.037  -0.956
147   P        -1.669  -1.687  -1.590  -1.560  -1.599  -1.493  -1.224  -1.235  -1.114
148   S        -0.236  -0.237  -0.224  -0.321  -0.304  -0.270  -0.436  -0.450  -0.419
149   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
150   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
151   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
152   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
153   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
154   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
155   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
156   M        -0.686  -0.766  -0.759  -0.500  -0.629  -0.642  -0.649  -0.750  -0.731
157   I        -0.236  -0.261  -0.241  -0.557  -0.578  -0.506  -0.436  -0.475  -0.439
158   T        -0.753  -0.720  -0.731  -0.978  -0.899  -0.878  -0.753  -0.702  -0.699
159   I        -1.138  -1.215  -1.205  -1.244  -1.344  -1.309  -0.910  -0.991  -0.954
160   A        -0.513  -0.555  -0.702  -0.419  -0.505  -0.793  -0.440  -0.497  -0.666
161   P        -0.753  -0.797  -0.768  -0.689  -0.752  -0.728  -0.753  -0.803  -0.746
162   E        -1.669  -1.687  -1.590  -1.553  -1.580  -1.438  -1.224  -1.235  -1.114
163   A         0.934   0.890   0.730   1.022   0.950   0.723   0.971   0.899   0.603
164   Q        -0.513  -0.555  -0.702  -0.328  -0.391  -0.569  -0.440  -0.497  -0.666
165   T        -0.899  -0.842  -0.779  -1.166  -1.065  -0.960  -0.910  -0.851  -0.756
166   R        -0.368  -0.278  -0.204  -0.355  -0.192  -0.096  -0.597  -0.484  -0.387
167   I        -0.753  -0.652  -0.697  -0.849  -0.626  -0.711  -0.753  -0.624  -0.660
168   T        -0.368  -0.278  -0.204  -0.740  -0.633  -0.529  -0.597  -0.484  -0.387
169   T        -0.753  -0.808  -0.777  -0.880  -0.982  -0.937  -0.753  -0.813  -0.755
170   G        -0.513  -0.594  -0.695  -0.268  -0.390  -0.538  -0.440  -0.546  -0.657
171   D         0.855   0.766   0.672   0.923   0.806   0.616   0.845   0.691   0.494
172   V        -0.966  -0.926  -0.823  -1.025  -0.962  -0.826  -0.969  -0.929  -0.800
173   G        -0.321  -0.317  -0.239  -0.495  -0.495  -0.370  -0.547  -0.543  -0.436
174   A         0.403   0.477   0.535  -0.101   0.063   0.137   0.030   0.162   0.234
175   T        -0.222  -0.250  -0.202  -0.656  -0.668  -0.574  -0.440  -0.462  -0.390
176   I        -0.753  -0.769  -0.725  -0.652  -0.683  -0.630  -0.753  -0.766  -0.701
177   D         1.732   1.740   1.802   1.754   1.780   1.870   1.911   1.931   2.031
178   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
179   S         0.182   0.082  -0.079   0.148   0.021  -0.244   0.187   0.039  -0.202
180   K        -0.222  -0.250  -0.202  -0.175  -0.213  -0.158  -0.440  -0.462  -0.390
181   S         1.732   1.740   1.802   1.549   1.567   1.671   1.911   1.931   2.031
182   F         0.934   0.840   0.720   1.233   1.123   0.970   0.971   0.817   0.584
183   T        -0.128   0.008  -0.078  -0.520  -0.276  -0.401  -0.283  -0.077  -0.201
184   V         0.403   0.440   0.499   0.285   0.337   0.425   0.030   0.089   0.162
185   P         0.182   0.437  -0.018   0.258   0.596  -0.098   0.187   0.535  -0.113
186   Y         1.732   1.740   1.802   1.771   1.785   1.887   1.911   1.931   2.031
187   N        -0.128  -0.185  -0.193  -0.390  -0.461  -0.430  -0.283  -0.372  -0.377
188   L        -0.368  -0.368  -0.278  -0.352  -0.354  -0.222  -0.597  -0.605  -0.485
189   Q         1.732   1.740   1.802   1.865   1.872   1.977   1.911   1.931   2.031
190   T         0.182   0.104  -0.066   0.026  -0.086  -0.313   0.187   0.068  -0.183
191   G         1.732   1.740   1.802   1.722   1.731   1.839   1.911   1.931   2.031
192   V        -0.753  -0.772  -0.727  -0.815  -0.848  -0.788  -0.753  -0.774  -0.703
193   V        -1.669  -1.643  -1.560  -1.781  -1.735  -1.611  -1.224  -1.204  -1.093
194   K         0.403   0.407   0.490   0.371   0.367   0.479   0.030   0.025   0.144
195   Y         0.568   0.570   0.553   0.594   0.596   0.556   0.344   0.338   0.269
196   A         1.732   1.740   1.802   1.620   1.633   1.740   1.911   1.931   2.031
197   P         1.732   1.740   1.802   1.737   1.737   1.853   1.911   1.931   2.031
198   M         1.732   1.740   1.802   1.937   1.949   2.048   1.911   1.931   2.031
199   Q         1.732   1.740   1.802   1.865   1.872   1.977   1.911   1.931   2.031
200   L        -0.753  -0.788  -0.761  -0.808  -0.809  -0.744  -0.753  -0.796  -0.739
201   Q         1.732   1.740   1.802   1.865   1.872   1.977   1.911   1.931   2.031
202   P         1.732   1.740   1.802   1.737   1.737   1.853   1.911   1.931   2.031
203   A         0.934   0.890   0.730   1.008   0.945   0.709   0.971   0.899   0.603
204   T         0.403   0.415   0.492  -0.165  -0.151  -0.039   0.030   0.040   0.148
205   K         0.403   0.415   0.492  -0.049  -0.019   0.111   0.030   0.040   0.148
206   V         0.403   0.412   0.491   0.283   0.285   0.408   0.030   0.035   0.145
207   T         1.732   1.740   1.802   1.403   1.423   1.529   1.911   1.931   2.031
208   A        -0.128  -0.013  -0.095  -0.087   0.061  -0.042  -0.283  -0.104  -0.225
209   K        -0.128  -0.130  -0.176  -0.192  -0.196  -0.289  -0.283  -0.290  -0.352
210   T         0.403   0.448   0.519  -0.197  -0.113  -0.005   0.030   0.105   0.201
211   W         0.403   0.448   0.519   0.526   0.604   0.697   0.030   0.105   0.201
212   K        -0.128  -0.037  -0.092  -0.445  -0.242  -0.339  -0.283  -0.137  -0.221
213   R         0.182   0.100  -0.076   0.595   0.494   0.238   0.187   0.063  -0.197
214   K         0.568   0.553   0.540   0.684   0.661   0.593   0.344   0.307   0.243
215   Y         0.403   0.413   0.491   0.347   0.355   0.463   0.030   0.036   0.146
216   A         0.568   0.529   0.538   0.395   0.318   0.327   0.344   0.261   0.239
217   T         1.732   1.740   1.802   1.403   1.423   1.529   1.911   1.931   2.031
218   S         1.732   1.740   1.802   1.549   1.567   1.671   1.911   1.931   2.031
219   E        -0.222  -0.227  -0.198  -0.470  -0.454  -0.373  -0.440  -0.440  -0.385
220   V         0.403   0.448   0.519   0.276   0.345   0.454   0.030   0.105   0.201
221   T         0.403   0.407   0.490  -0.165  -0.176  -0.050   0.030   0.024   0.144
222   Y        -0.753  -0.717  -0.704  -0.683  -0.598  -0.571  -0.753  -0.699  -0.668
223   Y         0.403   0.408   0.490   0.325   0.336   0.458   0.030   0.028   0.144
224   Y        -1.138  -1.215  -1.205  -1.178  -1.301  -1.312  -0.910  -0.991  -0.954
225   T         0.403   0.408   0.490  -0.197  -0.182  -0.051   0.030   0.028   0.144
226   L        -0.753  -0.720  -0.731  -0.611  -0.540  -0.557  -0.753  -0.702  -0.699
227   R        -1.284  -1.259  -1.208  -1.244  -1.208  -1.158  -1.067  -1.037  -0.956
228   N        -1.284  -1.270  -1.208  -1.051  -1.032  -0.964  -1.067  -1.048  -0.956
229   S        -0.128  -0.188  -0.185  -0.453  -0.542  -0.570  -0.283  -0.363  -0.366
230   V         0.182   0.126  -0.069   0.374   0.281   0.009   0.187   0.102  -0.188
231   D        -1.138  -1.215  -1.205  -0.679  -0.813  -0.826  -0.910  -0.991  -0.954
232   Q        -0.222  -0.247  -0.209  -0.096  -0.106  -0.025  -0.440  -0.458  -0.398
233   H        -1.284  -1.280  -1.218  -0.958  -0.993  -0.954  -1.067  -1.057  -0.966
234   T         0.568   0.529   0.538   0.109   0.039   0.032   0.344   0.261   0.239
235   T         1.732   1.740   1.802   1.403   1.423   1.529   1.911   1.931   2.031
236   V        -0.753  -0.792  -0.725  -0.621  -0.668  -0.587  -0.753  -0.788  -0.702
237   T         1.732   1.740   1.802   1.403   1.423   1.529   1.911   1.931   2.031
238   P         1.732   1.740   1.802   1.737   1.737   1.853   1.911   1.931   2.031
239   G         1.732   1.740   1.802   1.722   1.731   1.839   1.911   1.931   2.031
240   W         1.732   1.740   1.802   1.981   1.999   2.090   1.911   1.931   2.031
241   S         0.568   0.729   0.692   0.334   0.588   0.529   0.344   0.626   0.533
242   Y         1.732   1.740   1.802   1.771   1.785   1.887   1.911   1.931   2.031
243   I        -1.138  -1.125  -1.140  -1.256  -1.252  -1.254  -0.910  -0.907  -0.892
244   I        -1.284  -1.134  -1.193  -1.021  -0.824  -0.912  -1.067  -0.942  -0.946
245   T        -1.669  -1.629  -1.546  -1.756  -1.690  -1.573  -1.224  -1.192  -1.081
246   A         0.934   0.890   0.730   0.833   0.781   0.544   0.971   0.899   0.603
247   D        -0.753  -0.583  -0.739  -0.726  -0.520  -0.714  -0.753  -0.596  -0.716
248   S        -1.284  -1.292  -1.213  -1.287  -1.344  -1.237  -1.067  -1.067  -0.960
249   N         1.732   1.740   1.802   1.918   1.927   2.029   1.911   1.931   2.031
250   Y         0.934   0.840   0.720   1.109   0.997   0.841   0.971   0.817   0.584
251   A         1.732   1.740   1.802   1.620   1.633   1.740   1.911   1.931   2.031
252   T        -0.128  -0.149  -0.186  -0.477  -0.515  -0.557  -0.283  -0.329  -0.368
253   P         0.403   0.477   0.535   0.243   0.352   0.451   0.030   0.162   0.234
254   A         1.732   1.740   1.802   1.620   1.633   1.740   1.911   1.931   2.031
255   P         1.732   1.740   1.802   1.737   1.737   1.853   1.911   1.931   2.031
256   M        -0.128  -0.159  -0.195   0.022  -0.014  -0.055  -0.283  -0.329  -0.378
257   P         1.732   1.740   1.802   1.737   1.737   1.853   1.911   1.931   2.031
258   A        -0.899  -0.863  -0.773  -1.154  -1.154  -1.039  -0.910  -0.870  -0.751
259   D        -1.284  -1.280  -1.218  -1.326  -1.258  -1.155  -1.067  -1.057  -0.966
260   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
261   G         0.638   0.581   0.594   0.587   0.480   0.490   0.471   0.359   0.347
262   G         1.732   1.740   1.802   1.717   1.725   1.834   1.911   1.931   2.031
263   W         0.568   0.729   0.692   0.696   0.971   0.885   0.344   0.626   0.533
264   Y         1.732   1.740   1.802   1.771   1.785   1.887   1.911   1.931   2.031
265   N        -0.753  -0.819  -0.774  -0.660  -0.761  -0.688  -0.753  -0.823  -0.752
266   P         0.403   0.413   0.491   0.111   0.114   0.249   0.030   0.036   0.146
267   R        -0.128  -0.159  -0.195  -0.235  -0.264  -0.294  -0.283  -0.329  -0.378
268   K        -0.753  -0.808  -0.777  -0.531  -0.638  -0.620  -0.753  -0.813  -0.755
269   R         0.182   0.218  -0.027   0.548   0.590   0.235   0.187   0.220  -0.126
270   L        -1.284  -1.292  -1.213  -1.071  -1.104  -0.996  -1.067  -1.067  -0.960
271   S        -0.222  -0.250  -0.202  -0.642  -0.623  -0.535  -0.440  -0.462  -0.390
272   L        -1.138  -1.163  -1.190  -0.894  -0.929  -0.940  -0.910  -0.939  -0.939
273   T         0.182   0.170  -0.057  -0.040  -0.054  -0.415   0.187   0.165  -0.169
274   A        -0.753  -0.801  -0.758  -0.964  -1.047  -0.978  -0.753  -0.804  -0.736
275   R        -0.222  -0.195  -0.207  -0.289  -0.217  -0.227  -0.440  -0.405  -0.397
276   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
277   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
278   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
279   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
280   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
281   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
282   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
283   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
284   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
285   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
286   K        -0.753  -0.720  -0.731  -0.671  -0.597  -0.643  -0.753  -0.702  -0.699
287   V        -0.899  -0.863  -0.781  -1.166  -1.069  -0.929  -0.910  -0.869  -0.759
288   N         0.493   0.634   0.643   0.458   0.716   0.705   0.204   0.456   0.440
289   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
290   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
291   A        -0.513  -0.591  -0.689  -0.470  -0.614  -0.775  -0.440  -0.542  -0.651
292   L        -1.284  -1.280  -1.218  -1.282  -1.251  -1.188  -1.067  -1.057  -0.966
293   R        -0.222  -0.247  -0.209  -0.080  -0.069  -0.006  -0.440  -0.458  -0.398
294   H        -0.513  -0.558  -0.675  -0.181  -0.241  -0.407  -0.440  -0.501  -0.635
295   R         0.182   0.082  -0.079   0.548   0.417   0.150   0.187   0.039  -0.202
296   -         1.732   1.740   1.802   1.934   1.945   2.044   1.911   1.931   2.031
297   -         0.758   0.655   0.614   1.077   0.912   0.837   0.682   0.494   0.385
298   -        -0.117  -0.255  -0.227  -0.102  -0.366  -0.344  -0.239  -0.446  -0.415
299   -         0.758   0.655   0.614   0.755   0.585   0.473   0.682   0.494   0.385
300   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
301   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
302   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
303   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
304   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
305   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
306   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
307   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
308   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
309   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
310   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
311   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/P50112
Output conservation file - output/P50112
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
