1     M         1.877   1.963   2.034   2.102   2.241   2.353   2.086   2.219   2.357
2     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
3     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
5     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
9     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
10    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
11    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
12    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
13    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
14    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
15    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
16    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
17    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
18    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
19    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
20    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
21    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
22    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
23    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
24    L         0.030   0.064   0.001  -0.153  -0.120  -0.185  -0.179  -0.153  -0.226
25    L        -0.064   0.030  -0.020  -0.363  -0.243  -0.306  -0.341  -0.226  -0.262
26    Q        -1.119  -1.018  -1.043  -1.091  -0.957  -0.977  -0.988  -0.879  -0.869
27    P        -0.975  -0.908  -0.995  -0.984  -0.914  -1.012  -0.826  -0.740  -0.815
28    V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
29    W        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
30    K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
31    G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
32    C        -1.502  -1.512  -1.431  -1.268  -1.292  -1.151  -1.150  -1.140  -1.036
33    R        -0.592  -0.706  -0.599  -0.923  -1.101  -0.941  -0.664  -0.765  -0.641
34    W        -0.592  -0.698  -0.601  -0.585  -0.738  -0.573  -0.664  -0.755  -0.642
35    T        -1.140  -1.096  -1.057  -1.179  -1.121  -1.052  -0.997  -0.935  -0.877
36    Q        -1.140  -1.142  -1.070  -1.168  -1.179  -1.054  -0.997  -0.983  -0.889
37    F        -1.140  -1.045  -1.049  -1.077  -0.915  -0.942  -0.997  -0.888  -0.869
38    V        -0.694  -0.584  -0.609  -0.972  -0.838  -0.846  -0.777  -0.650  -0.653
39    R        -0.694  -0.651  -0.620  -0.888  -0.818  -0.776  -0.777  -0.712  -0.664
40    P        -0.525  -0.543  -0.561  -0.540  -0.601  -0.599  -0.556  -0.573  -0.589
41    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
42    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
43    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
44    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
45    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
46    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
47    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
48    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
49    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
50    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
51    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
52    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
53    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
54    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
55    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
56    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
57    I        -1.885  -1.846  -1.771  -1.546  -1.410  -1.376  -1.311  -1.261  -1.164
58    R        -0.064  -0.127  -0.032  -0.295  -0.390  -0.250  -0.341  -0.399  -0.275
59    R        -0.975  -0.935  -0.979  -0.852  -0.791  -0.865  -0.826  -0.775  -0.799
60    W        -0.975  -0.878  -1.003  -0.897  -0.778  -0.910  -0.826  -0.710  -0.823
61    N        -1.119  -1.166  -1.085  -1.168  -1.244  -1.122  -0.988  -1.010  -0.905
62    S        -0.592  -0.590  -0.583  -0.662  -0.685  -0.678  -0.664  -0.646  -0.620
63    T        -0.592  -0.575  -0.554  -0.595  -0.573  -0.524  -0.664  -0.628  -0.589
64    G        -0.975  -0.924  -0.992  -0.837  -0.764  -0.868  -0.826  -0.757  -0.811
65    T        -0.592  -0.604  -0.595  -0.631  -0.664  -0.651  -0.664  -0.675  -0.639
66    N        -1.119  -1.030  -1.044  -1.182  -1.053  -1.077  -0.988  -0.889  -0.870
67    R        -0.975  -0.899  -0.977  -0.988  -0.914  -1.015  -0.826  -0.731  -0.796
68    G        -0.353  -0.486  -0.529  -0.210  -0.400  -0.471  -0.341  -0.507  -0.550
69    V        -0.698  -0.708  -0.639  -0.598  -0.569  -0.501  -0.768  -0.772  -0.682
70    P        -0.698  -0.666  -0.637  -0.722  -0.696  -0.679  -0.768  -0.727  -0.680
71    F        -0.698  -0.717  -0.651  -0.676  -0.696  -0.601  -0.768  -0.782  -0.696
72    S        -0.353  -0.302  -0.454  -0.312  -0.254  -0.502  -0.341  -0.272  -0.456
73    F        -1.502  -1.433  -1.422  -1.156  -1.054  -1.024  -1.150  -1.072  -1.029
74    K        -0.592  -0.626  -0.598  -0.874  -0.930  -0.868  -0.664  -0.695  -0.642
75    D        -0.736  -0.761  -0.637  -0.815  -0.873  -0.680  -0.826  -0.827  -0.685
76    I        -0.975  -0.878  -1.003  -0.853  -0.710  -0.936  -0.826  -0.710  -0.823
77    S        -1.502  -1.498  -1.453  -1.550  -1.521  -1.448  -1.150  -1.129  -1.054
78    N        -1.119  -0.980  -1.041  -0.842  -0.618  -0.708  -0.988  -0.833  -0.867
79    Q        -0.592  -0.432  -0.544  -0.763  -0.544  -0.674  -0.664  -0.459  -0.579
80    E        -1.119  -1.177  -1.075  -1.075  -1.197  -1.038  -0.988  -1.018  -0.896
81    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
82    D        -0.162  -0.122  -0.061  -0.197  -0.141  -0.040  -0.451  -0.394  -0.312
83    I        -0.698  -0.711  -0.637  -0.785  -0.839  -0.725  -0.768  -0.773  -0.680
84    T        -0.525  -0.577  -0.571  -0.447  -0.554  -0.550  -0.556  -0.619  -0.601
85    N         0.200   0.037   0.049   0.319   0.065   0.051   0.104  -0.138  -0.138
86    I        -0.078  -0.025  -0.039  -0.262  -0.251  -0.247  -0.336  -0.284  -0.284
87    S        -1.140  -1.181  -1.085  -1.172  -1.255  -1.104  -0.997  -1.019  -0.904
88    Y        -1.885  -1.846  -1.771  -1.499  -1.488  -1.328  -1.311  -1.261  -1.164
89    P         0.030  -0.073  -0.014   0.113  -0.074   0.003  -0.179  -0.321  -0.247
90    S        -1.502  -1.501  -1.430  -1.263  -1.282  -1.157  -1.150  -1.131  -1.036
91    S        -1.885  -1.846  -1.771  -1.686  -1.612  -1.519  -1.311  -1.261  -1.164
92    S        -1.502  -1.318  -1.408  -1.524  -1.169  -1.405  -1.150  -0.957  -1.017
93    D        -0.975  -0.909  -1.007  -0.717  -0.600  -0.800  -0.826  -0.749  -0.827
94    S        -1.119  -1.014  -1.043  -1.310  -1.192  -1.189  -0.988  -0.875  -0.869
95    V        -1.119  -1.083  -1.060  -1.184  -1.097  -1.067  -0.988  -0.936  -0.883
96    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
97    L        -1.502  -1.413  -1.412  -1.343  -1.161  -1.217  -1.150  -1.052  -1.020
98    T        -0.353  -0.486  -0.529  -0.405  -0.596  -0.651  -0.341  -0.507  -0.550
99    K        -0.592  -0.625  -0.583  -0.778  -0.864  -0.791  -0.664  -0.693  -0.627
100   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
101   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
102   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
103   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
104   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
105   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
106   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
107   Y        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
108   K        -0.064  -0.093  -0.004  -0.461  -0.488  -0.350  -0.341  -0.355  -0.240
109   P        -1.119  -0.996  -1.039  -1.186  -1.020  -1.060  -0.988  -0.861  -0.865
110   K        -1.502  -1.498  -1.453  -1.465  -1.442  -1.433  -1.150  -1.129  -1.054
111   E         1.084   1.018   0.952   1.148   1.046   0.927   1.115   0.993   0.850
112   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
113   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
114   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
115   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
116   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
117   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
118   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
119   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
120   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
121   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
122   E        -1.119  -1.097  -1.063  -1.231  -1.179  -1.116  -0.988  -0.951  -0.886
123   V         0.030   0.074   0.029   0.053   0.101   0.062  -0.179  -0.134  -0.185
124   V        -0.353  -0.337  -0.492  -0.203  -0.164  -0.418  -0.341  -0.323  -0.504
125   K        -0.975  -1.061  -1.041  -1.045  -1.158  -1.132  -0.826  -0.905  -0.862
126   Y        -0.592  -0.713  -0.611  -0.244  -0.390  -0.247  -0.664  -0.774  -0.652
127   I        -0.209  -0.177  -0.105  -0.466  -0.368  -0.280  -0.503  -0.461  -0.369
128   L         1.084   1.018   0.952   0.988   0.907   0.801   1.115   0.993   0.850
129   H        -0.209  -0.091  -0.048  -0.130   0.085   0.122  -0.503  -0.330  -0.284
130   G        -0.736  -0.742  -0.641  -0.696  -0.721  -0.566  -0.826  -0.808  -0.688
131   K        -1.119  -1.011  -1.034  -1.288  -1.136  -1.166  -0.988  -0.873  -0.861
132   F         0.338   0.113   0.093   0.583   0.282   0.248   0.306  -0.024  -0.070
133   T        -0.975  -0.932  -0.995  -0.806  -0.777  -0.859  -0.826  -0.772  -0.815
134   K         0.721   0.841   0.820   0.353   0.543   0.483   0.468   0.670   0.592
135   N         0.721   0.841   0.820   0.750   0.948   0.899   0.468   0.670   0.592
136   N         1.877   1.963   2.034   1.941   2.086   2.188   2.086   2.219   2.357
137   T         1.084   1.018   0.952   1.188   1.096   0.975   1.115   0.993   0.850
138   H         0.338   0.493   0.184   0.635   0.868   0.368   0.306   0.538   0.068
139   L        -0.736  -0.649  -0.635  -0.793  -0.647  -0.612  -0.826  -0.714  -0.682
140   T         0.338   0.321   0.169   0.558   0.555   0.332   0.306   0.278   0.045
141   F        -0.592  -0.546  -0.578  -0.654  -0.591  -0.620  -0.664  -0.590  -0.615
142   S        -0.592  -0.713  -0.611  -0.570  -0.694  -0.553  -0.664  -0.774  -0.652
143   S         0.030  -0.066  -0.017  -0.009  -0.155  -0.094  -0.179  -0.310  -0.252
144   V         1.006   0.881   0.868   1.048   0.849   0.828   0.985   0.744   0.688
145   V         0.200   0.121   0.042   0.316   0.186   0.091   0.104  -0.024  -0.148
146   E         1.006   0.881   0.868   1.074   0.868   0.846   0.985   0.744   0.688
147   D         1.877   1.963   2.034   2.011   2.143   2.259   2.086   2.219   2.357
148   K        -0.525  -0.425  -0.556  -0.748  -0.595  -0.815  -0.556  -0.417  -0.582
149   N        -0.078  -0.145  -0.056  -0.124  -0.222  -0.102  -0.336  -0.414  -0.301
150   F         1.006   1.134   0.911   1.163   1.352   1.037   0.985   1.190   0.771
151   -        -0.162  -0.193  -0.091  -0.294  -0.322  -0.186  -0.451  -0.481  -0.351
152   H        -1.140  -1.125  -1.094  -0.949  -0.921  -0.866  -0.997  -0.967  -0.913
153   K        -0.078  -0.135  -0.056  -0.396  -0.474  -0.356  -0.336  -0.398  -0.302
154   N         1.877   1.963   2.034   1.900   2.027   2.146   2.086   2.219   2.357
155   K        -0.162  -0.123  -0.078  -0.342  -0.294  -0.226  -0.451  -0.396  -0.333
156   G        -1.235  -1.226  -1.113  -0.995  -0.969  -0.813  -1.085  -1.056  -0.929
157   L         1.877   1.963   2.034   1.685   1.805   1.926   2.086   2.219   2.357
158   T        -0.078   0.001  -0.034  -0.163  -0.034  -0.080  -0.336  -0.216  -0.273
159   Y         1.006   0.881   0.868   1.244   1.076   1.033   0.985   0.744   0.688
160   N         1.006   0.881   0.868   1.123   0.958   0.921   0.985   0.744   0.688
161   D         0.537   0.594   0.682   0.363   0.431   0.577   0.104   0.183   0.310
162   T         1.006   1.128   0.910   0.828   1.003   0.685   0.985   1.180   0.768
163   M        -0.694  -0.712  -0.649  -0.665  -0.728  -0.602  -0.777  -0.782  -0.695
164   L         1.877   1.963   2.034   1.711   1.843   1.953   2.086   2.219   2.357
165   Y         1.006   0.881   0.868   1.256   1.093   1.056   0.985   0.744   0.688
166   Y         1.006   0.881   0.868   1.181   0.978   0.910   0.985   0.744   0.688
167   L         1.006   0.881   0.868   0.881   0.694   0.657   0.985   0.744   0.688
168   N        -0.694  -0.619  -0.626  -0.798  -0.702  -0.733  -0.777  -0.682  -0.669
169   L         0.338   0.113   0.093   0.325   0.020  -0.013   0.306  -0.024  -0.070
170   P         1.084   0.965   0.944   1.349   1.183   1.151   1.115   0.899   0.834
171   Q         0.030  -0.023   0.018   0.183   0.094   0.155  -0.179  -0.231  -0.190
172   K        -0.353  -0.328  -0.463  -0.343  -0.315  -0.468  -0.341  -0.302  -0.467
173   V         0.338   0.274   0.160   0.475   0.379   0.221   0.306   0.203   0.032
174   K         0.338   0.113   0.093   0.225  -0.107  -0.151   0.306  -0.024  -0.070
175   I        -0.353  -0.156  -0.445  -0.103   0.186  -0.235  -0.341  -0.073  -0.444
176   S        -0.592  -0.576  -0.560  -0.478  -0.460  -0.444  -0.664  -0.629  -0.597
177   L        -0.736  -0.765  -0.642  -0.924  -0.945  -0.773  -0.826  -0.832  -0.689
178   S         1.084   1.208   0.988   1.139   1.318   1.017   1.115   1.311   0.917
179   T        -0.592  -0.713  -0.611  -0.508  -0.666  -0.508  -0.664  -0.774  -0.652
180   G         1.877   1.963   2.034   1.859   1.977   2.104   2.086   2.219   2.357
181   C        -0.736  -0.761  -0.643  -0.458  -0.494  -0.309  -0.826  -0.827  -0.690
182   L         1.084   0.965   0.944   1.039   0.906   0.887   1.115   0.899   0.834
183   G         1.877   1.963   2.034   1.859   1.977   2.104   2.086   2.219   2.357
184   F         1.084   1.018   0.952   1.243   1.165   1.067   1.115   0.993   0.850
185   R         1.084   1.018   0.952   1.032   0.916   0.811   1.115   0.993   0.850
186   K         1.877   1.963   2.034   1.657   1.788   1.898   2.086   2.219   2.357
187   A        -0.353  -0.508  -0.524  -0.279  -0.559  -0.609  -0.341  -0.531  -0.544
188   A        -1.119  -1.163  -1.078  -1.125  -1.228  -1.113  -0.988  -1.007  -0.899
189   R         1.877   1.963   2.034   1.791   1.898   2.035   2.086   2.219   2.357
190   G        -0.353  -0.371  -0.500  -0.244  -0.310  -0.482  -0.341  -0.363  -0.513
191   E         1.084   0.965   0.944   1.180   1.006   0.976   1.115   0.899   0.834
192   Y         1.877   1.963   2.034   2.061   2.204   2.310   2.086   2.219   2.357
193   E         0.721   0.641   0.705   0.682   0.530   0.627   0.468   0.279   0.359
194   A         1.084   1.018   0.952   1.177   1.089   0.986   1.115   0.993   0.850
195   A         0.030   0.171   0.063  -0.046   0.178   0.006  -0.179   0.032  -0.122
196   F         0.721   0.708   0.735   0.739   0.714   0.739   0.468   0.413   0.420
197   Q         1.084   0.965   0.944   1.328   1.170   1.134   1.115   0.899   0.834
198   T         0.030  -0.023   0.018   0.019  -0.042   0.005  -0.179  -0.231  -0.190
199   S        -0.353  -0.337  -0.492  -0.172  -0.129  -0.356  -0.341  -0.323  -0.504
200   G        -0.592  -0.546  -0.578  -0.642  -0.567  -0.623  -0.664  -0.590  -0.615
201   R         0.557   0.609   0.688   0.047   0.106   0.233   0.145   0.213   0.322
202   M        -0.592  -0.621  -0.598  -0.497  -0.560  -0.557  -0.664  -0.689  -0.642
203   F         1.084   0.965   0.944   1.203   1.028   0.976   1.115   0.899   0.834
204   E         0.030   0.200   0.073  -0.088   0.177   0.000  -0.179   0.068  -0.108
205   L        -0.592  -0.583  -0.567  -0.642  -0.619  -0.566  -0.664  -0.639  -0.607
206   I         0.721   0.738   0.741   0.612   0.610   0.566   0.468   0.471   0.432
207   K        -0.592  -0.586  -0.582  -0.646  -0.592  -0.600  -0.664  -0.635  -0.620
208   E        -0.353  -0.503  -0.531  -0.223  -0.498  -0.532  -0.341  -0.527  -0.552
209   K         0.721   0.841   0.820   0.353   0.543   0.483   0.468   0.670   0.592
210   N        -0.592  -0.639  -0.599  -0.690  -0.785  -0.755  -0.664  -0.707  -0.643
211   M         0.030   0.092   0.032  -0.057   0.034  -0.021  -0.179  -0.102  -0.179
212   L        -0.353  -0.342  -0.473  -0.330  -0.340  -0.488  -0.341  -0.329  -0.480
213   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
214   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
215   N        -1.119  -1.177  -1.075  -0.870  -0.942  -0.785  -0.988  -1.018  -0.896
216   K        -0.592  -0.713  -0.611  -0.764  -0.939  -0.787  -0.664  -0.774  -0.652
217   D        -0.736  -0.743  -0.638  -0.821  -0.780  -0.639  -0.826  -0.808  -0.685
218   I         0.338   0.113   0.093   0.493   0.129   0.075   0.306  -0.024  -0.070
219   E         1.084   0.965   0.944   1.224   1.075   1.060   1.115   0.899   0.834
220   V        -0.209  -0.091  -0.048  -0.480  -0.280  -0.230  -0.503  -0.330  -0.284
221   V         0.557   0.610   0.686   0.354   0.419   0.536   0.145   0.215   0.318
222   M        -0.592  -0.713  -0.611  -0.528  -0.700  -0.570  -0.664  -0.774  -0.652
223   D        -0.736  -0.761  -0.643  -0.897  -0.905  -0.727  -0.826  -0.827  -0.690
224   D         0.030   0.021  -0.014   0.088   0.012  -0.018  -0.179  -0.228  -0.249
225   F         1.877   1.963   2.034   1.953   2.083   2.200   2.086   2.219   2.357
226   G         1.084   0.965   0.944   1.132   0.958   0.926   1.115   0.899   0.834
227   K         0.338   0.113   0.093   0.243  -0.076  -0.117   0.306  -0.024  -0.070
228   G         1.084   0.965   0.944   1.140   0.970   0.943   1.115   0.899   0.834
229   R         1.877   1.963   2.034   1.791   1.898   2.035   2.086   2.219   2.357
230   A        -0.353  -0.119  -0.453  -0.155   0.177  -0.301  -0.341  -0.026  -0.455
231   A         1.084   1.018   0.952   1.177   1.089   0.986   1.115   0.993   0.850
232   F         1.084   0.965   0.944   1.230   1.068   1.029   1.115   0.899   0.834
233   I        -0.592  -0.626  -0.598  -0.515  -0.562  -0.535  -0.664  -0.695  -0.642
234   S         0.030  -0.009   0.022  -0.029  -0.056  -0.046  -0.179  -0.209  -0.189
235   A         1.084   0.965   0.944   1.229   1.090   1.073   1.115   0.899   0.834
236   L         1.877   1.963   2.034   1.711   1.839   1.952   2.086   2.219   2.357
237   V        -1.119  -1.079  -1.059  -1.126  -1.078  -1.031  -0.988  -0.931  -0.881
238   G         1.084   1.018   0.952   1.140   1.049   0.957   1.115   0.993   0.850
239   K         0.338   0.113   0.093   0.301   0.013  -0.009   0.306  -0.024  -0.070
240   E         1.877   1.963   2.034   1.906   2.027   2.153   2.086   2.219   2.357
241   G         1.877   1.963   2.034   1.859   1.977   2.104   2.086   2.219   2.357
242   A        -0.736  -0.747  -0.640  -0.832  -0.831  -0.682  -0.826  -0.813  -0.686
243   S        -0.975  -0.909  -1.007  -1.144  -1.044  -1.218  -0.826  -0.749  -0.827
244   V         0.557   0.609   0.688   0.354   0.418   0.540   0.145   0.213   0.322
245   V        -0.592  -0.560  -0.572  -0.842  -0.791  -0.799  -0.664  -0.609  -0.606
246   K        -1.502  -1.514  -1.450  -1.430  -1.418  -1.343  -1.150  -1.141  -1.051
247   K         0.030   0.171   0.063  -0.168   0.045  -0.086  -0.179   0.032  -0.122
248   V         0.557   0.615   0.690   0.354   0.431   0.545   0.145   0.226   0.326
249   V        -0.975  -0.898  -0.976  -0.798  -0.675  -0.802  -0.826  -0.730  -0.796
250   K         0.721   0.719   0.733   0.431   0.376   0.364   0.468   0.434   0.415
251   I        -0.064  -0.093  -0.009  -0.220  -0.274  -0.146  -0.341  -0.355  -0.246
252   S        -0.353  -0.368  -0.479  -0.131  -0.140  -0.279  -0.341  -0.359  -0.487
253   D         1.877   1.963   2.034   2.026   2.166   2.275   2.086   2.219   2.357
254   A        -0.592  -0.510  -0.572  -0.719  -0.647  -0.723  -0.664  -0.581  -0.615
255   T         1.877   1.963   2.034   1.938   2.066   2.184   2.086   2.219   2.357
256   K        -0.975  -0.929  -0.991  -1.006  -0.923  -1.016  -0.826  -0.769  -0.811
257   L         1.084   0.965   0.944   1.002   0.847   0.814   1.115   0.899   0.834
258   K         0.338   0.321   0.169   0.274   0.261   0.052   0.306   0.278   0.045
259   F         1.084   1.018   0.952   1.257   1.185   1.094   1.115   0.993   0.850
260   G         1.877   1.963   2.034   1.859   1.977   2.104   2.086   2.219   2.357
261   G         1.877   1.963   2.034   1.859   1.977   2.104   2.086   2.219   2.357
262   V        -0.975  -1.061  -1.041  -0.764  -0.879  -0.852  -0.826  -0.905  -0.862
263   R         1.084   1.214   0.982   1.032   1.202   0.863   1.115   1.321   0.905
264   S        -0.592  -0.586  -0.582  -0.501  -0.482  -0.496  -0.664  -0.635  -0.620
265   P         0.030  -0.023   0.018   0.005  -0.073  -0.046  -0.179  -0.231  -0.190
266   K        -0.064  -0.097  -0.025  -0.473  -0.517  -0.395  -0.341  -0.362  -0.265
267   M        -1.119  -1.175  -1.081  -1.045  -1.158  -0.972  -0.988  -1.016  -0.902
268   R         1.877   1.963   2.034   1.791   1.898   2.035   2.086   2.219   2.357
269   R         1.877   1.963   2.034   1.791   1.898   2.035   2.086   2.219   2.357
270   L         0.338   0.113   0.093   0.296  -0.026  -0.066   0.306  -0.024  -0.070
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/P42847
Output conservation file - output/P42847
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
