1     M         2.389   2.405   2.505   2.748   2.772   2.953   2.767   2.826   3.017
2     R         1.273   1.214   1.100   1.433   1.424   1.238   1.370   1.272   1.043
3     F         0.672   0.764   0.854   0.394   0.565   0.733   0.252   0.416   0.555
4     S         0.812   0.773   0.824   0.565   0.440   0.529   0.532   0.434   0.493
5     M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
9     F        -0.187  -0.130  -0.097  -0.119  -0.043   0.003  -0.376  -0.309  -0.267
10    N        -0.689  -0.751  -0.799  -0.571  -0.693  -0.792  -0.586  -0.675  -0.719
11    L         0.812   0.781   0.830   0.458   0.377   0.446   0.532   0.451   0.504
12    L        -0.689  -0.744  -0.793  -0.398  -0.522  -0.597  -0.586  -0.667  -0.712
13    T         0.240   0.102   0.011   0.346   0.140  -0.049   0.252   0.038  -0.103
14    A         1.273   1.198   1.094   1.242   1.155   1.007   1.370   1.243   1.033
15    L        -0.117   0.007   0.030  -0.282  -0.115  -0.071  -0.306  -0.107  -0.075
16    S        -0.117   0.093   0.028  -0.375  -0.008  -0.115  -0.306   0.014  -0.078
17    S        -0.689  -0.814  -0.837  -0.657  -0.863  -0.885  -0.586  -0.749  -0.763
18    F        -0.117   0.019   0.036  -0.319  -0.067  -0.050  -0.306  -0.090  -0.065
19    C        -1.478  -1.484  -1.437  -1.314  -1.297  -1.202  -1.144  -1.151  -1.080
20    A         1.273   1.310   1.119   1.219   1.281   1.008   1.370   1.439   1.081
21    A        -1.478  -1.484  -1.437  -1.280  -1.301  -1.238  -1.144  -1.151  -1.080
22    I        -1.478  -1.484  -1.437  -1.669  -1.724  -1.640  -1.144  -1.151  -1.080
23    S        -0.905  -0.813  -0.805  -1.091  -0.945  -0.918  -0.865  -0.754  -0.726
24    A        -0.117  -0.001   0.029  -0.188   0.013   0.083  -0.306  -0.119  -0.076
25    N        -0.117   0.093   0.028  -0.113   0.209   0.095  -0.306   0.014  -0.078
26    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
27    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
28    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
29    N        -1.478  -1.484  -1.437  -1.211  -1.248  -1.143  -1.144  -1.151  -1.080
30    S        -1.478  -1.484  -1.437  -1.398  -1.450  -1.389  -1.144  -1.151  -1.080
31    D         0.812   1.064   1.101   0.758   1.179   1.243   0.532   0.999   1.046
32    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
33    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
34    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
35    N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
36    V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
37    E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
38    H        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
39    E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
40    Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
41    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
42    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
43    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
44    E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
45    V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
46    A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
47    E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
48    A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
49    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
50    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
51    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
52    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
53    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
54    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
55    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
56    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
57    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
58    -         0.722   0.729   0.807   0.603   0.600   0.726   0.353   0.345   0.457
59    -        -0.911  -0.944  -0.891  -0.808  -0.884  -0.772  -0.854  -0.900  -0.824
60    -         0.722   0.723   0.811   0.561   0.630   0.726   0.353   0.332   0.465
61    V         0.240   0.216   0.056   0.497   0.452   0.153   0.252   0.206  -0.036
62    A        -0.689  -0.814  -0.837  -0.522  -0.722  -0.785  -0.586  -0.749  -0.763
63    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
64    P        -1.045  -0.959  -0.891  -1.024  -0.913  -0.806  -1.005  -0.915  -0.824
65    S        -0.187  -0.130  -0.097  -0.290  -0.209  -0.157  -0.376  -0.309  -0.267
66    I        -0.117  -0.001   0.029  -0.485  -0.251  -0.220  -0.306  -0.119  -0.076
67    N         0.812   1.064   1.101   0.736   1.136   1.205   0.532   0.999   1.046
68    I        -0.117  -0.145  -0.110  -0.297  -0.348  -0.271  -0.306  -0.351  -0.298
69    E        -0.689  -0.744  -0.793  -0.642  -0.756  -0.821  -0.586  -0.667  -0.712
70    V         0.672   0.739   0.827   0.139   0.269   0.392   0.252   0.365   0.497
71    K        -0.689  -0.814  -0.837  -0.431  -0.662  -0.717  -0.586  -0.749  -0.763
72    Y         2.389   2.405   2.505   2.580   2.616   2.785   2.767   2.826   3.017
73    D        -0.117   0.093   0.028  -0.194   0.190   0.092  -0.306   0.014  -0.078
74    V        -0.117  -0.151  -0.124  -0.475  -0.548  -0.510  -0.306  -0.362  -0.315
75    V        -0.905  -0.813  -0.805  -1.075  -0.945  -0.949  -0.865  -0.754  -0.726
76    G         1.273   1.214   1.100   1.380   1.289   1.148   1.370   1.272   1.043
77    K        -0.905  -0.813  -0.805  -0.874  -0.722  -0.710  -0.865  -0.754  -0.726
78    E         0.240   0.115   0.018   0.496   0.287   0.150   0.252   0.057  -0.093
79    S        -0.689  -0.814  -0.837  -0.500  -0.736  -0.741  -0.586  -0.749  -0.763
80    E        -1.478  -1.484  -1.437  -1.412  -1.442  -1.345  -1.144  -1.151  -1.080
81    N        -0.689  -0.814  -0.837  -0.577  -0.820  -0.839  -0.586  -0.749  -0.763
82    H        -1.478  -1.484  -1.437  -1.091  -1.177  -1.087  -1.144  -1.151  -1.080
83    D        -1.478  -1.484  -1.437  -1.198  -1.227  -1.147  -1.144  -1.151  -1.080
84    S         0.240   0.115   0.018   0.503   0.289   0.145   0.252   0.057  -0.093
85    F        -0.117  -0.156  -0.125  -0.319  -0.368  -0.302  -0.306  -0.368  -0.317
86    L        -0.117  -0.143  -0.121  -0.455  -0.521  -0.481  -0.306  -0.352  -0.310
87    E        -0.117   0.007   0.030  -0.244  -0.050  -0.011  -0.306  -0.107  -0.075
88    F        -0.905  -0.827  -0.814  -0.669  -0.630  -0.632  -0.865  -0.770  -0.737
89    Y         0.240   0.216   0.056   0.423   0.376   0.157   0.252   0.206  -0.036
90    A         0.240   0.124   0.015   0.341   0.144  -0.071   0.252   0.070  -0.097
91    E         1.273   1.214   1.100   1.445   1.366   1.199   1.370   1.272   1.043
92    D        -0.117  -0.150  -0.109  -0.119  -0.193  -0.134  -0.306  -0.356  -0.297
93    T         0.240   0.193   0.047   0.346   0.287   0.014   0.252   0.171  -0.049
94    A        -0.905  -0.827  -0.814  -1.246  -1.112  -1.102  -0.865  -0.770  -0.737
95    T         0.812   0.808   0.838   0.640   0.634   0.641   0.532   0.506   0.520
96    L         1.273   1.187   1.099   1.287   1.159   1.064   1.370   1.224   1.041
97    A        -1.478  -1.484  -1.437  -1.242  -1.350  -1.284  -1.144  -1.151  -1.080
98    Y         2.389   2.405   2.505   2.580   2.616   2.785   2.767   2.826   3.017
99    N        -0.905  -0.821  -0.812  -1.023  -0.844  -0.836  -0.865  -0.764  -0.734
100   V         0.240   0.102   0.011   0.203   0.004  -0.152   0.252   0.038  -0.103
101   T        -0.117   0.007   0.030  -0.084   0.166   0.202  -0.306  -0.107  -0.075
102   N         2.389   2.405   2.505   2.431   2.470   2.636   2.767   2.826   3.017
103   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
104   W        -0.689  -0.814  -0.837  -0.370  -0.574  -0.575  -0.586  -0.749  -0.763
105   E         1.273   1.198   1.094   1.404   1.297   1.181   1.370   1.243   1.033
106   D         0.672   0.741   0.829   0.461   0.565   0.729   0.252   0.369   0.503
107   T        -1.478  -1.484  -1.437  -1.433  -1.468  -1.411  -1.144  -1.151  -1.080
108   N        -0.905  -0.869  -0.809  -0.826  -0.769  -0.660  -0.865  -0.816  -0.730
109   I         0.240   0.102   0.011   0.238   0.035  -0.113   0.252   0.038  -0.103
110   T        -0.117  -0.150  -0.109  -0.213  -0.266  -0.212  -0.306  -0.356  -0.297
111   I         0.812   0.781   0.830   0.416   0.355   0.399   0.532   0.451   0.504
112   F         0.240   0.115   0.018   0.289   0.128  -0.004   0.252   0.057  -0.093
113   G         1.273   1.187   1.099   1.418   1.299   1.151   1.370   1.224   1.041
114   V         1.273   1.187   1.099   1.222   1.129   1.001   1.370   1.224   1.041
115   N        -0.905  -0.869  -0.809  -0.858  -0.794  -0.703  -0.865  -0.816  -0.730
116   G         2.389   2.405   2.505   2.469   2.510   2.675   2.767   2.826   3.017
117   T        -0.905  -0.869  -0.809  -0.851  -0.846  -0.765  -0.865  -0.816  -0.730
118   I        -0.117  -0.151  -0.124  -0.237  -0.353  -0.328  -0.306  -0.362  -0.315
119   V        -1.478  -1.484  -1.437  -1.381  -1.432  -1.360  -1.144  -1.151  -1.080
120   T        -0.905  -0.869  -0.809  -0.821  -0.775  -0.673  -0.865  -0.816  -0.730
121   Y        -0.689  -0.814  -0.837  -0.298  -0.505  -0.502  -0.586  -0.749  -0.763
122   P        -1.478  -1.377  -1.357  -1.540  -1.381  -1.379  -1.144  -1.058  -1.005
123   H        -0.689  -0.814  -0.837  -0.379  -0.591  -0.588  -0.586  -0.749  -0.763
124   G        -0.905  -0.881  -0.812  -0.783  -0.745  -0.626  -0.865  -0.829  -0.735
125   Y        -1.478  -1.484  -1.437  -1.049  -1.043  -0.940  -1.144  -1.151  -1.080
126   P        -0.689  -0.744  -0.793  -0.701  -0.796  -0.883  -0.586  -0.667  -0.712
127   V         0.240   0.193   0.047   0.170   0.117  -0.147   0.252   0.171  -0.049
128   A         0.672   0.764   0.854   0.281   0.447   0.569   0.252   0.416   0.555
129   D         0.812   0.778   0.830   0.736   0.659   0.742   0.532   0.444   0.504
130   I         0.812   0.778   0.830   0.477   0.375   0.454   0.532   0.444   0.504
131   T         1.273   1.187   1.099   1.397   1.314   1.165   1.370   1.224   1.041
132   G        -1.478  -1.484  -1.437  -1.226  -1.231  -1.169  -1.144  -1.151  -1.080
133   A        -0.333  -0.210  -0.117  -0.582  -0.393  -0.282  -0.586  -0.433  -0.307
134   S        -1.478  -1.484  -1.437  -1.357  -1.371  -1.329  -1.144  -1.151  -1.080
135   I        -0.117  -0.156  -0.125  -0.411  -0.464  -0.405  -0.306  -0.368  -0.317
136   G         0.240   0.102   0.011   0.449   0.232   0.072   0.252   0.038  -0.103
137   P         1.273   1.198   1.094   1.460   1.348   1.204   1.370   1.243   1.033
138   Y        -0.117  -0.136  -0.110  -0.385  -0.406  -0.363  -0.306  -0.340  -0.298
139   E        -1.478  -1.484  -1.437  -1.433  -1.448  -1.354  -1.144  -1.151  -1.080
140   M         0.240   0.124   0.015   0.274   0.114  -0.032   0.252   0.070  -0.097
141   E        -0.117   0.019   0.036  -0.283  -0.075  -0.041  -0.306  -0.090  -0.065
142   V        -0.689  -0.751  -0.799  -0.605  -0.764  -0.887  -0.586  -0.675  -0.719
143   N         0.672   0.764   0.854   0.464   0.619   0.764   0.252   0.416   0.555
144   G         0.240   0.124   0.015   0.359   0.155  -0.011   0.252   0.070  -0.097
145   T        -0.905  -0.827  -0.814  -1.028  -0.845  -0.856  -0.865  -0.770  -0.737
146   S        -0.905  -0.869  -0.809  -1.113  -1.043  -0.934  -0.865  -0.816  -0.730
147   K        -0.689  -0.760  -0.799  -0.454  -0.515  -0.618  -0.586  -0.686  -0.719
148   F         0.812   0.773   0.824   0.714   0.586   0.661   0.532   0.434   0.493
149   G        -1.478  -1.484  -1.437  -1.185  -1.248  -1.168  -1.144  -1.151  -1.080
150   Q         1.273   1.198   1.094   1.633   1.548   1.422   1.370   1.243   1.033
151   D         1.273   1.214   1.100   1.387   1.371   1.161   1.370   1.272   1.043
152   V         0.240   0.115   0.018   0.162  -0.046  -0.225   0.252   0.057  -0.093
153   T        -0.905  -0.874  -0.806  -0.778  -0.727  -0.613  -0.865  -0.821  -0.727
154   L        -0.905  -0.881  -0.812  -1.041  -0.980  -0.841  -0.865  -0.829  -0.735
155   N         0.672   0.739   0.827   0.493   0.589   0.736   0.252   0.365   0.497
156   L         2.389   2.405   2.505   2.283   2.305   2.489   2.767   2.826   3.017
157   P        -0.905  -0.821  -0.812  -1.016  -0.836  -0.845  -0.865  -0.764  -0.734
158   E        -0.117   0.093   0.028  -0.205   0.111   0.018  -0.306   0.014  -0.078
159   G        -0.117   0.093   0.028  -0.194   0.186   0.100  -0.306   0.014  -0.078
160   Q        -0.689  -0.814  -0.837  -0.390  -0.588  -0.605  -0.586  -0.749  -0.763
161   Y         1.273   1.187   1.099   1.535   1.406   1.269   1.370   1.224   1.041
162   F        -0.905  -0.813  -0.805  -0.786  -0.640  -0.611  -0.865  -0.754  -0.726
163   L         0.240   0.102   0.011   0.192  -0.056  -0.217   0.252   0.038  -0.103
164   I        -0.117  -0.089  -0.109  -0.401  -0.385  -0.390  -0.306  -0.289  -0.297
165   P         2.389   2.405   2.505   2.484   2.515   2.689   2.767   2.826   3.017
166   F        -1.478  -1.374  -1.352  -0.921  -0.858  -0.762  -1.144  -1.054  -1.000
167   L        -0.333  -0.212  -0.119  -0.825  -0.633  -0.483  -0.586  -0.435  -0.310
168   L        -0.689  -0.814  -0.837  -0.301  -0.521  -0.527  -0.586  -0.749  -0.763
169   A        -0.117   0.019   0.036  -0.493  -0.225  -0.221  -0.306  -0.090  -0.065
170   S        -0.689  -0.814  -0.837  -0.658  -0.847  -0.887  -0.586  -0.749  -0.763
171   R        -1.478  -1.484  -1.437  -1.078  -1.100  -1.070  -1.144  -1.151  -1.080
172   F        -0.689  -0.744  -0.793  -0.405  -0.518  -0.602  -0.586  -0.667  -0.712
173   D        -1.478  -1.484  -1.437  -1.280  -1.324  -1.216  -1.144  -1.151  -1.080
174   E        -0.117   0.093   0.028  -0.245   0.094   0.039  -0.306   0.014  -0.078
175   I        -0.689  -0.760  -0.799  -0.714  -0.838  -0.910  -0.586  -0.686  -0.719
176   V         0.240   0.115   0.018   0.422   0.295   0.096   0.252   0.057  -0.093
177   R        -0.905  -0.827  -0.814  -0.758  -0.558  -0.542  -0.865  -0.770  -0.737
178   I         0.812   0.773   0.824   0.428   0.342   0.392   0.532   0.434   0.493
179   A        -1.478  -1.484  -1.437  -1.078  -1.113  -1.021  -1.144  -1.151  -1.080
180   A        -0.117   0.007   0.030  -0.101   0.033   0.071  -0.306  -0.107  -0.075
181   P        -0.689  -0.814  -0.837  -0.210  -0.479  -0.526  -0.586  -0.749  -0.763
182   P        -0.117  -0.151  -0.124  -0.093  -0.154  -0.111  -0.306  -0.362  -0.315
183   T        -0.689  -0.814  -0.837  -0.369  -0.602  -0.676  -0.586  -0.749  -0.763
184   L         0.240   0.102   0.011   0.263   0.042  -0.101   0.252   0.038  -0.103
185   F        -0.689  -0.814  -0.837  -0.725  -0.960  -0.990  -0.586  -0.749  -0.763
186   E        -0.689  -0.814  -0.837  -0.443  -0.627  -0.665  -0.586  -0.749  -0.763
187   I        -0.117  -0.145  -0.110  -0.475  -0.534  -0.489  -0.306  -0.351  -0.298
188   V         0.240   0.202   0.050   0.181   0.128  -0.123   0.252   0.185  -0.044
189   S        -0.689  -0.814  -0.837  -0.411  -0.659  -0.686  -0.586  -0.749  -0.763
190   P        -0.905  -0.821  -0.812  -0.922  -0.754  -0.727  -0.865  -0.764  -0.734
191   P        -0.117   0.007   0.030  -0.224   0.014   0.059  -0.306  -0.107  -0.075
192   I        -0.117  -0.001   0.029  -0.475  -0.247  -0.205  -0.306  -0.119  -0.076
193   S         2.389   2.405   2.505   2.357   2.379   2.563   2.767   2.826   3.017
194   F        -0.117  -0.089  -0.109  -0.219  -0.245  -0.266  -0.306  -0.289  -0.297
195   F         2.389   2.405   2.505   2.518   2.546   2.723   2.767   2.826   3.017
196   N         0.672   0.741   0.829   0.493   0.593   0.741   0.252   0.369   0.503
197   P         1.273   1.310   1.119   1.439   1.487   1.212   1.370   1.439   1.081
198   Q        -0.117   0.007   0.030   0.129   0.300   0.336  -0.306  -0.107  -0.075
199   F         0.672   0.764   0.854   0.394   0.565   0.733   0.252   0.416   0.555
200   L         0.812   1.064   1.101   0.477   0.898   0.973   0.532   0.999   1.046
201   S         0.672   0.764   0.854   0.447   0.564   0.730   0.252   0.416   0.555
202   V        -0.117  -0.143  -0.121  -0.444  -0.524  -0.486  -0.306  -0.352  -0.310
203   Q        -0.117  -0.151  -0.124  -0.146  -0.206  -0.152  -0.306  -0.362  -0.315
204   V        -0.117  -0.134  -0.107  -0.441  -0.500  -0.458  -0.306  -0.337  -0.294
205   I         0.240   0.115   0.018   0.203   0.025  -0.141   0.252   0.057  -0.093
206   F         1.273   1.214   1.100   1.287   1.197   1.065   1.370   1.272   1.043
207   L         1.273   1.198   1.094   1.231   1.110   0.961   1.370   1.243   1.033
208   A        -0.117  -0.001   0.029  -0.400  -0.164  -0.115  -0.306  -0.119  -0.076
209   I        -0.117  -0.143  -0.121  -0.309  -0.381  -0.363  -0.306  -0.352  -0.310
210   I        -0.333  -0.210  -0.117  -0.669  -0.526  -0.398  -0.586  -0.433  -0.307
211   G         0.672   0.739   0.827   0.332   0.468   0.605   0.252   0.365   0.497
212   G         1.273   1.187   1.099   1.418   1.299   1.151   1.370   1.224   1.041
213   V        -0.905  -0.869  -0.809  -1.165  -1.103  -1.018  -0.865  -0.816  -0.730
214   S        -0.905  -0.821  -0.812  -1.154  -1.027  -1.006  -0.865  -0.764  -0.734
215   Y         2.389   2.405   2.505   2.580   2.616   2.785   2.767   2.826   3.017
216   Y        -0.905  -0.821  -0.812  -0.900  -0.732  -0.698  -0.865  -0.764  -0.734
217   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
218   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
219   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
220   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
221   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
222   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
223   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
224   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
225   Y         1.273   1.187   1.099   1.522   1.399   1.248   1.370   1.224   1.041
226   M        -0.689  -0.744  -0.793  -0.376  -0.499  -0.566  -0.586  -0.667  -0.712
227   K        -0.689  -0.760  -0.799  -0.518  -0.604  -0.708  -0.586  -0.686  -0.719
228   -         0.035  -0.128  -0.126   0.129  -0.165  -0.183  -0.049  -0.307  -0.309
229   -         0.035  -0.044  -0.085  -0.105  -0.223  -0.308  -0.049  -0.184  -0.248
230   S         0.240   0.115   0.018   0.262   0.072  -0.067   0.252   0.057  -0.093
231   K         0.812   0.778   0.830   0.729   0.670   0.711   0.532   0.444   0.504
232   T        -0.905  -0.821  -0.812  -1.055  -0.857  -0.873  -0.865  -0.764  -0.734
233   N        -0.187  -0.247  -0.186  -0.285  -0.341  -0.317  -0.376  -0.480  -0.397
234   Q        -0.117  -0.143  -0.121  -0.280  -0.261  -0.239  -0.306  -0.352  -0.310
235   R         0.240   0.115   0.018   0.506   0.393   0.230   0.252   0.057  -0.093
236   P        -0.905  -0.821  -0.812  -0.922  -0.776  -0.788  -0.865  -0.764  -0.734
237   S        -0.117  -0.141  -0.109  -0.384  -0.401  -0.362  -0.306  -0.345  -0.297
238   K         0.812   1.064   1.101   0.626   1.103   1.112   0.532   0.999   1.046
239   K         0.812   1.064   1.101   0.576   1.077   1.075   0.532   0.999   1.046
240   S        -0.689  -0.814  -0.837  -0.632  -0.836  -0.847  -0.586  -0.749  -0.763
241   A        -0.905  -0.827  -0.814  -1.023  -0.892  -0.892  -0.865  -0.770  -0.737
242   T        -1.478  -1.484  -1.437  -1.390  -1.381  -1.299  -1.144  -1.151  -1.080
243   V        -0.905  -0.874  -0.806  -0.990  -0.962  -0.849  -0.865  -0.821  -0.727
244   K         0.240   0.124   0.015   0.309   0.120  -0.071   0.252   0.070  -0.097
245   K        -0.117  -0.156  -0.125  -0.127  -0.178  -0.160  -0.306  -0.368  -0.317
246   V         1.149   1.033   0.992   0.965   0.794   0.695   1.158   0.941   0.834
247   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
248   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
249   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
250   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
251   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
252   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
253   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
254   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
255   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
256   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
257   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
258   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
259   D         0.240   0.193   0.047   0.494   0.393   0.179   0.252   0.171  -0.049
260   E        -0.905  -0.827  -0.814  -0.915  -0.806  -0.777  -0.865  -0.770  -0.737
261   S        -0.333  -0.212  -0.119  -0.548  -0.406  -0.237  -0.586  -0.435  -0.310
262   W         2.389   2.405   2.505   2.767   2.803   2.971   2.767   2.826   3.017
263   L         0.672   0.764   0.854   0.188   0.346   0.506   0.252   0.416   0.555
264   P         2.389   2.405   2.505   2.484   2.515   2.689   2.767   2.826   3.017
265   E         1.273   1.198   1.094   1.387   1.273   1.153   1.370   1.243   1.033
266   T        -0.905  -0.821  -0.812  -1.050  -0.903  -0.930  -0.865  -0.764  -0.734
267   Y         1.273   1.214   1.100   1.748   1.661   1.518   1.370   1.272   1.043
268   K        -0.117  -0.156  -0.125  -0.352  -0.396  -0.374  -0.306  -0.368  -0.317
269   K         2.389   2.405   2.505   2.387   2.485   2.593   2.767   2.826   3.017
270   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
271   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
272   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
273   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
274   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
275   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
276   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
277   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/P40006
Output conservation file - output/P40006
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
