1     M         1.842   1.842   1.842   2.141   2.141   2.141   1.842   1.842   1.842
2     Q        -0.540  -0.540  -0.540  -0.355  -0.355  -0.355  -0.540  -0.540  -0.540
3     T        -0.540  -0.540  -0.540  -0.496  -0.496  -0.496  -0.540  -0.540  -0.540
4     P         1.842   1.842   1.842   1.878   1.878   1.878   1.842   1.842   1.842
5     P        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
6     E        -0.540  -0.540  -0.540  -0.522  -0.522  -0.522  -0.540  -0.540  -0.540
7     S        -0.540  -0.540  -0.540  -0.549  -0.549  -0.549  -0.540  -0.540  -0.540
8     T        -0.540  -0.540  -0.540  -0.575  -0.575  -0.575  -0.540  -0.540  -0.540
9     D        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
10    V        -0.540  -0.540  -0.540  -0.496  -0.496  -0.496  -0.540  -0.540  -0.540
11    K        -0.540  -0.540  -0.540  -0.535  -0.535  -0.535  -0.540  -0.540  -0.540
12    L        -0.540  -0.540  -0.540  -0.562  -0.562  -0.562  -0.540  -0.540  -0.540
13    D        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
14    T        -0.540  -0.540  -0.540  -0.764  -0.764  -0.764  -0.540  -0.540  -0.540
15    L         1.842   1.842   1.842   1.457   1.457   1.457   1.842   1.842   1.842
16    N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
17    E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
18    P         1.842   1.842   1.842   1.878   1.878   1.878   1.842   1.842   1.842
19    S        -0.540  -0.540  -0.540  -0.588  -0.588  -0.588  -0.540  -0.540  -0.540
20    A        -0.540  -0.540  -0.540  -0.615  -0.615  -0.615  -0.540  -0.540  -0.540
21    H        -0.540  -0.540  -0.540  -0.292  -0.292  -0.292  -0.540  -0.540  -0.540
22    L        -0.540  -0.540  -0.540  -0.861  -0.861  -0.861  -0.540  -0.540  -0.540
23    I        -0.540  -0.540  -0.540  -0.549  -0.549  -0.549  -0.540  -0.540  -0.540
24    E        -0.540  -0.540  -0.540  -0.601  -0.601  -0.601  -0.540  -0.540  -0.540
25    K        -0.540  -0.540  -0.540  -0.496  -0.496  -0.496  -0.540  -0.540  -0.540
26    N        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
27    V        -0.540  -0.540  -0.540  -0.457  -0.457  -0.457  -0.540  -0.540  -0.540
28    A        -0.540  -0.540  -0.540  -0.668  -0.668  -0.668  -0.540  -0.540  -0.540
29    L        -0.540  -0.540  -0.540  -0.791  -0.791  -0.791  -0.540  -0.540  -0.540
30    P        -0.540  -0.540  -0.540  -0.355  -0.355  -0.355  -0.540  -0.540  -0.540
31    K        -0.540  -0.540  -0.540  -0.393  -0.393  -0.393  -0.540  -0.540  -0.540
32    D        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
33    I        -0.540  -0.540  -0.540  -0.861  -0.861  -0.861  -0.540  -0.540  -0.540
34    F        -0.540  -0.540  -0.540  -0.380  -0.380  -0.380  -0.540  -0.540  -0.540
35    R         1.842   1.842   1.842   1.949   1.949   1.949   1.842   1.842   1.842
36    S        -0.540  -0.540  -0.540  -0.549  -0.549  -0.549  -0.540  -0.540  -0.540
37    Y        -0.540  -0.540  -0.540  -0.444  -0.444  -0.444  -0.540  -0.540  -0.540
38    L        -0.540  -0.540  -0.540  -0.861  -0.861  -0.861  -0.540  -0.540  -0.540
39    S         1.842   1.842   1.842   1.753   1.753   1.753   1.842   1.842   1.842
40    Y        -0.540  -0.540  -0.540  -0.444  -0.444  -0.444  -0.540  -0.540  -0.540
41    W        -0.540  -0.540  -0.540  -0.330  -0.330  -0.330  -0.540  -0.540  -0.540
42    I         1.842   1.842   1.842   1.753   1.753   1.753   1.842   1.842   1.842
43    Y        -0.540  -0.540  -0.540  -0.722  -0.722  -0.722  -0.540  -0.540  -0.540
44    E        -0.540  -0.540  -0.540  -0.292  -0.292  -0.292  -0.540  -0.540  -0.540
45    I        -0.540  -0.540  -0.540  -0.641  -0.641  -0.641  -0.540  -0.540  -0.540
46    A        -0.540  -0.540  -0.540  -0.889  -0.889  -0.889  -0.540  -0.540  -0.540
47    R         1.842   1.842   1.842   1.949   1.949   1.949   1.842   1.842   1.842
48    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
49    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
50    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
51    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
52    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
53    Y        -0.540  -0.540  -0.540  -0.444  -0.444  -0.444  -0.540  -0.540  -0.540
54    T        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
55    P        -0.540  -0.540  -0.540  -0.267  -0.267  -0.267  -0.540  -0.540  -0.540
56    V         1.842   1.842   1.842   1.825   1.825   1.825   1.842   1.842   1.842
57    M        -0.540  -0.540  -0.540  -0.304  -0.304  -0.304  -0.540  -0.540  -0.540
58    I         1.842   1.842   1.842   1.753   1.753   1.753   1.842   1.842   1.842
59    L        -0.540  -0.540  -0.540  -0.764  -0.764  -0.764  -0.540  -0.540  -0.540
60    S        -0.540  -0.540  -0.540  -0.549  -0.549  -0.549  -0.540  -0.540  -0.540
61    L        -0.540  -0.540  -0.540  -0.805  -0.805  -0.805  -0.540  -0.540  -0.540
62    V         1.842   1.842   1.842   1.825   1.825   1.825   1.842   1.842   1.842
63    I        -0.540  -0.540  -0.540  -0.668  -0.668  -0.668  -0.540  -0.540  -0.540
64    G        -0.540  -0.540  -0.540  -0.131  -0.131  -0.131  -0.540  -0.540  -0.540
65    V        -0.540  -0.540  -0.540  -0.805  -0.805  -0.805  -0.540  -0.540  -0.540
66    L         1.842   1.842   1.842   1.457   1.457   1.457   1.842   1.842   1.842
67    V        -0.540  -0.540  -0.540  -0.457  -0.457  -0.457  -0.540  -0.540  -0.540
68    L        -0.540  -0.540  -0.540  -0.655  -0.655  -0.655  -0.540  -0.540  -0.540
69    L         1.842   1.842   1.842   1.457   1.457   1.457   1.842   1.842   1.842
70    I        -0.540  -0.540  -0.540  -0.668  -0.668  -0.668  -0.540  -0.540  -0.540
71    I        -0.540  -0.540  -0.540  -0.861  -0.861  -0.861  -0.540  -0.540  -0.540
72    F        -0.540  -0.540  -0.540  -0.444  -0.444  -0.444  -0.540  -0.540  -0.540
73    F        -0.540  -0.540  -0.540  -0.509  -0.509  -0.509  -0.540  -0.540  -0.540
74    N        -0.540  -0.540  -0.540  -0.791  -0.791  -0.791  -0.540  -0.540  -0.540
75    D         1.842   1.842   1.842   1.878   1.878   1.878   1.842   1.842   1.842
76    N        -0.540  -0.540  -0.540  -0.575  -0.575  -0.575  -0.540  -0.540  -0.540
77    E        -0.540  -0.540  -0.540  -0.380  -0.380  -0.380  -0.540  -0.540  -0.540
78    A        -0.540  -0.540  -0.540  -0.601  -0.601  -0.601  -0.540  -0.540  -0.540
79    C        -0.540  -0.540  -0.540  -0.342  -0.342  -0.342  -0.540  -0.540  -0.540
80    V        -0.540  -0.540  -0.540  -0.805  -0.805  -0.805  -0.540  -0.540  -0.540
81    F         1.842   1.842   1.842   1.843   1.843   1.843   1.842   1.842   1.842
82    N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
83    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
84    A        -0.540  -0.540  -0.540  -0.668  -0.668  -0.668  -0.540  -0.540  -0.540
85    I         1.842   1.842   1.842   1.753   1.753   1.753   1.842   1.842   1.842
86    F         1.842   1.842   1.842   1.843   1.843   1.843   1.842   1.842   1.842
87    A        -0.540  -0.540  -0.540  -0.380  -0.380  -0.380  -0.540  -0.540  -0.540
88    F        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
89    T         1.842   1.842   1.842   1.878   1.878   1.878   1.842   1.842   1.842
90    S        -0.540  -0.540  -0.540  -0.668  -0.668  -0.668  -0.540  -0.540  -0.540
91    L        -0.540  -0.540  -0.540  -0.805  -0.805  -0.805  -0.540  -0.540  -0.540
92    V        -0.540  -0.540  -0.540  -0.615  -0.615  -0.615  -0.540  -0.540  -0.540
93    G        -0.540  -0.540  -0.540  -0.380  -0.380  -0.380  -0.540  -0.540  -0.540
94    L         1.842   1.842   1.842   1.457   1.457   1.457   1.842   1.842   1.842
95    L        -0.540  -0.540  -0.540  -0.791  -0.791  -0.791  -0.540  -0.540  -0.540
96    I        -0.540  -0.540  -0.540  -0.317  -0.317  -0.317  -0.540  -0.540  -0.540
97    I        -0.540  -0.540  -0.540  -0.861  -0.861  -0.861  -0.540  -0.540  -0.540
98    L        -0.540  -0.540  -0.540  -0.791  -0.791  -0.791  -0.540  -0.540  -0.540
99    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
100   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
101   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
102   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
103   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
104   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
105   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
106   S        -0.540  -0.540  -0.540  -0.496  -0.496  -0.496  -0.540  -0.540  -0.540
107   D        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
108   G        -0.540  -0.540  -0.540  -0.355  -0.355  -0.355  -0.540  -0.540  -0.540
109   N        -0.540  -0.540  -0.540  -0.509  -0.509  -0.509  -0.540  -0.540  -0.540
110   P         1.842   1.842   1.842   1.878   1.878   1.878   1.842   1.842   1.842
111   K        -0.540  -0.540  -0.540  -0.588  -0.588  -0.588  -0.540  -0.540  -0.540
112   L        -0.540  -0.540  -0.540  -0.655  -0.655  -0.655  -0.540  -0.540  -0.540
113   V        -0.540  -0.540  -0.540  -0.588  -0.588  -0.588  -0.540  -0.540  -0.540
114   S        -0.540  -0.540  -0.540  -0.588  -0.588  -0.588  -0.540  -0.540  -0.540
115   R        -0.540  -0.540  -0.540  -0.431  -0.431  -0.431  -0.540  -0.540  -0.540
116   R        -0.540  -0.540  -0.540  -0.444  -0.444  -0.444  -0.540  -0.540  -0.540
117   N        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
118   F        -0.540  -0.540  -0.540  -0.575  -0.575  -0.575  -0.540  -0.540  -0.540
119   R        -0.540  -0.540  -0.540  -0.304  -0.304  -0.304  -0.540  -0.540  -0.540
120   T        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
121   E        -0.540  -0.540  -0.540  -0.601  -0.601  -0.601  -0.540  -0.540  -0.540
122   L         1.842   1.842   1.842   1.457   1.457   1.457   1.842   1.842   1.842
123   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
124   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
125   L         1.842   1.842   1.842   1.457   1.457   1.457   1.842   1.842   1.842
126   V        -0.540  -0.540  -0.540  -0.535  -0.535  -0.535  -0.540  -0.540  -0.540
127   D        -0.540  -0.540  -0.540  -0.457  -0.457  -0.457  -0.540  -0.540  -0.540
128   V        -0.540  -0.540  -0.540  -0.588  -0.588  -0.588  -0.540  -0.540  -0.540
129   I        -0.540  -0.540  -0.540  -0.355  -0.355  -0.355  -0.540  -0.540  -0.540
130   T        -0.540  -0.540  -0.540  -0.457  -0.457  -0.457  -0.540  -0.540  -0.540
131   R        -0.540  -0.540  -0.540  -0.431  -0.431  -0.431  -0.540  -0.540  -0.540
132   K         1.842   1.842   1.842   1.825   1.825   1.825   1.842   1.842   1.842
133   P         1.842   1.842   1.842   1.878   1.878   1.878   1.842   1.842   1.842
134   A        -0.540  -0.540  -0.540  -0.668  -0.668  -0.668  -0.540  -0.540  -0.540
135   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
136   V        -0.540  -0.540  -0.540  -0.588  -0.588  -0.588  -0.540  -0.540  -0.540
137   E        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
138   G        -0.540  -0.540  -0.540  -0.168  -0.168  -0.168  -0.540  -0.540  -0.540
139   K         1.842   1.842   1.842   1.825   1.825   1.825   1.842   1.842   1.842
140   E        -0.540  -0.540  -0.540  -0.292  -0.292  -0.292  -0.540  -0.540  -0.540
141   W         1.842   1.842   1.842   2.175   2.175   2.175   1.842   1.842   1.842
142   R        -0.540  -0.540  -0.540  -0.406  -0.406  -0.406  -0.540  -0.540  -0.540
143   I         1.842   1.842   1.842   1.753   1.753   1.753   1.842   1.842   1.842
144   I        -0.540  -0.540  -0.540  -0.588  -0.588  -0.588  -0.540  -0.540  -0.540
145   T        -0.540  -0.540  -0.540  -0.575  -0.575  -0.575  -0.540  -0.540  -0.540
146   Y        -0.540  -0.540  -0.540  -0.368  -0.368  -0.368  -0.540  -0.540  -0.540
147   N        -0.540  -0.540  -0.540  -0.522  -0.522  -0.522  -0.540  -0.540  -0.540
148   M        -0.540  -0.540  -0.540  -0.304  -0.304  -0.304  -0.540  -0.540  -0.540
149   N         1.842   1.842   1.842   1.843   1.843   1.843   1.842   1.842   1.842
150   Q        -0.540  -0.540  -0.540  -0.304  -0.304  -0.304  -0.540  -0.540  -0.540
151   Y        -0.540  -0.540  -0.540  -0.230  -0.230  -0.230  -0.540  -0.540  -0.540
152   L         1.842   1.842   1.842   1.457   1.457   1.457   1.842   1.842   1.842
153   F        -0.540  -0.540  -0.540  -0.444  -0.444  -0.444  -0.540  -0.540  -0.540
154   N        -0.540  -0.540  -0.540  -0.509  -0.509  -0.509  -0.540  -0.540  -0.540
155   H        -0.540  -0.540  -0.540  -0.380  -0.380  -0.380  -0.540  -0.540  -0.540
156   G         1.842   1.842   1.842   2.019   2.019   2.019   1.842   1.842   1.842
157   Q        -0.540  -0.540  -0.540  -0.355  -0.355  -0.355  -0.540  -0.540  -0.540
158   W         1.842   1.842   1.842   2.175   2.175   2.175   1.842   1.842   1.842
159   H        -0.540  -0.540  -0.540  -0.267  -0.267  -0.267  -0.540  -0.540  -0.540
160   T        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
161   P        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
162   Y        -0.540  -0.540  -0.540  -0.368  -0.368  -0.368  -0.540  -0.540  -0.540
163   Y        -0.540  -0.540  -0.540  -0.444  -0.444  -0.444  -0.540  -0.540  -0.540
164   F         1.842   1.842   1.842   1.843   1.843   1.843   1.842   1.842   1.842
165   Y         1.842   1.842   1.842   1.932   1.932   1.932   1.842   1.842   1.842
166   S        -0.540  -0.540  -0.540  -0.549  -0.549  -0.549  -0.540  -0.540  -0.540
167   D        -0.540  -0.540  -0.540  -0.355  -0.355  -0.355  -0.540  -0.540  -0.540
168   E        -0.540  -0.540  -0.540  -0.522  -0.522  -0.522  -0.540  -0.540  -0.540
169   D        -0.540  -0.540  -0.540  -0.406  -0.406  -0.406  -0.540  -0.540  -0.540
170   C         1.842   1.842   1.842   2.192   2.192   2.192   1.842   1.842   1.842
171   Y        -0.540  -0.540  -0.540  -0.230  -0.230  -0.230  -0.540  -0.540  -0.540
172   R        -0.540  -0.540  -0.540  -0.522  -0.522  -0.522  -0.540  -0.540  -0.540
173   Y        -0.540  -0.540  -0.540  -0.230  -0.230  -0.230  -0.540  -0.540  -0.540
174   F         1.842   1.842   1.842   1.843   1.843   1.843   1.842   1.842   1.842
175   L        -0.540  -0.540  -0.540  -0.861  -0.861  -0.861  -0.540  -0.540  -0.540
176   R        -0.540  -0.540  -0.540  -0.522  -0.522  -0.522  -0.540  -0.540  -0.540
177   L         1.842   1.842   1.842   1.457   1.457   1.457   1.842   1.842   1.842
178   V         1.842   1.842   1.842   1.825   1.825   1.825   1.842   1.842   1.842
179   E        -0.540  -0.540  -0.540  -0.522  -0.522  -0.522  -0.540  -0.540  -0.540
180   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
181   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
182   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
183   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
184   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
185   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
186   Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
187   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
188   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
189   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
190   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
191   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
192   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
193   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
194   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
195   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
196   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
197   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
198   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
199   K         1.842   1.842   1.842   1.825   1.825   1.825   1.842   1.842   1.842
200   P         1.842   1.842   1.842   1.878   1.878   1.878   1.842   1.842   1.842
201   E        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
202   D         1.842   1.842   1.842   1.878   1.878   1.878   1.842   1.842   1.842
203   A        -0.540  -0.540  -0.540  -0.575  -0.575  -0.575  -0.540  -0.540  -0.540
204   I        -0.540  -0.540  -0.540  -0.861  -0.861  -0.861  -0.540  -0.540  -0.540
205   E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
206   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
207   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
208   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
209   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
210   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
211   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
212   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
213   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
214   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
215   Y        -0.540  -0.540  -0.540  -0.722  -0.722  -0.722  -0.540  -0.540  -0.540
216   Q        -0.540  -0.540  -0.540  -0.267  -0.267  -0.267  -0.540  -0.540  -0.540
217   N        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
218   F        -0.540  -0.540  -0.540  -0.444  -0.444  -0.444  -0.540  -0.540  -0.540
219   L        -0.540  -0.540  -0.540  -0.861  -0.861  -0.861  -0.540  -0.540  -0.540
220   L        -0.540  -0.540  -0.540  -0.861  -0.861  -0.861  -0.540  -0.540  -0.540
221   K         1.842   1.842   1.842   1.825   1.825   1.825   1.842   1.842   1.842
222   A         1.842   1.842   1.842   1.716   1.716   1.716   1.842   1.842   1.842
223   A        -0.540  -0.540  -0.540  -0.601  -0.601  -0.601  -0.540  -0.540  -0.540
224   E         1.842   1.842   1.842   1.843   1.843   1.843   1.842   1.842   1.842
225   I        -0.540  -0.540  -0.540  -0.549  -0.549  -0.549  -0.540  -0.540  -0.540
226   E        -0.540  -0.540  -0.540  -0.791  -0.791  -0.791  -0.540  -0.540  -0.540
227   R        -0.540  -0.540  -0.540  -0.444  -0.444  -0.444  -0.540  -0.540  -0.540
228   Q        -0.540  -0.540  -0.540  -0.355  -0.355  -0.355  -0.540  -0.540  -0.540
229   A        -0.540  -0.540  -0.540  -0.668  -0.668  -0.668  -0.540  -0.540  -0.540
230   Q        -0.540  -0.540  -0.540  -0.083  -0.083  -0.083  -0.540  -0.540  -0.540
231   E        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
232   N        -0.540  -0.540  -0.540  -0.509  -0.509  -0.509  -0.540  -0.540  -0.540
233   Y        -0.540  -0.540  -0.540  -0.722  -0.722  -0.722  -0.540  -0.540  -0.540
234   W         1.842   1.842   1.842   2.175   2.175   2.175   1.842   1.842   1.842
235   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
236   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
237   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
238   H        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
239   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
240   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
241   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
242   D        -0.540  -0.540  -0.540  -0.483  -0.483  -0.483  -0.540  -0.540  -0.540
243   A        -0.540  -0.540  -0.540  -0.668  -0.668  -0.668  -0.540  -0.540  -0.540
244   L        -0.540  -0.540  -0.540  -0.764  -0.764  -0.764  -0.540  -0.540  -0.540
245   L        -0.540  -0.540  -0.540  -0.889  -0.889  -0.889  -0.540  -0.540  -0.540
246   K        -0.540  -0.540  -0.540  -0.615  -0.615  -0.615  -0.540  -0.540  -0.540
247   K        -0.540  -0.540  -0.540  -0.588  -0.588  -0.588  -0.540  -0.540  -0.540
248   T        -0.540  -0.540  -0.540  -0.549  -0.549  -0.549  -0.540  -0.540  -0.540
249   E        -0.540  -0.540  -0.540  -0.601  -0.601  -0.601  -0.540  -0.540  -0.540
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/P39552
Output conservation file - output/P39552
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
