1     M         0.877   0.877   0.877   1.299   1.299   1.299   0.877   0.877   0.877
2     K         0.877   0.877   0.877   1.036   1.036   1.036   0.877   0.877   0.877
3     F         0.877   0.877   0.877   1.139   1.139   1.139   0.877   0.877   0.877
4     Q         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
5     V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
6     V        -1.137  -1.137  -1.137  -1.350  -1.351  -1.350  -1.137  -1.137  -1.137
7     L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
8     S        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
9     A        -1.137  -1.137  -1.137  -1.577  -1.578  -1.577  -1.137  -1.137  -1.137
10    L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
11    L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
12    A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
13    C        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
14    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
15    S        -1.137  -1.137  -1.137  -1.577  -1.578  -1.577  -1.137  -1.137  -1.137
16    A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
17    V        -1.137  -1.137  -1.137  -1.350  -1.351  -1.350  -1.137  -1.137  -1.137
18    V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
19    A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
20    S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
21    P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
22    I        -1.137  -1.137  -1.137  -1.083  -1.084  -1.083  -1.137  -1.137  -1.137
23    E         0.877   0.877   0.877   1.156   1.156   1.156   0.877   0.877   0.877
24    N        -1.137  -1.137  -1.137  -0.827  -0.821  -0.827  -1.137  -1.137  -1.137
25    L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
26    F         0.877   0.877   0.877   1.139   1.139   1.139   0.877   0.877   0.877
27    K         0.877   0.877   0.877   1.036   1.036   1.036   0.877   0.877   0.877
28    Y        -1.137  -1.137  -1.137  -0.526  -0.526  -0.526  -1.137  -1.137  -1.137
29    R        -1.137  -1.137  -1.137  -0.626  -0.626  -0.626  -1.137  -1.137  -1.137
30    A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
31    V        -1.137  -1.137  -1.137  -1.031  -1.031  -1.031  -1.137  -1.137  -1.137
32    K         0.877   0.877   0.877   1.036   1.036   1.036   0.877   0.877   0.877
33    A        -1.137  -1.137  -1.137  -1.577  -1.578  -1.577  -1.137  -1.137  -1.137
34    S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
35    H        -1.137  -1.137  -1.137  -0.796  -0.796  -0.796  -1.137  -1.137  -1.137
36    S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
37    K        -1.137  -1.137  -1.137  -1.238  -1.239  -1.238  -1.137  -1.137  -1.137
38    N        -1.137  -1.137  -1.137  -1.143  -1.137  -1.143  -1.137  -1.137  -1.137
39    I        -1.137  -1.137  -1.137  -0.662  -0.662  -0.662  -1.137  -1.137  -1.137
40    N        -1.137  -1.137  -1.137  -0.921  -0.915  -0.921  -1.137  -1.137  -1.137
41    S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
42    T        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
43    L        -1.137  -1.137  -1.137  -1.136  -1.137  -1.136  -1.137  -1.137  -1.137
44    P        -1.137  -1.137  -1.137  -1.004  -1.005  -1.004  -1.137  -1.137  -1.137
45    A        -1.137  -1.137  -1.137  -1.103  -1.104  -1.103  -1.137  -1.137  -1.137
46    W        -1.137  -1.137  -1.137  -0.602  -0.603  -0.602  -1.137  -1.137  -1.137
47    N        -1.137  -1.137  -1.137  -0.908  -0.903  -0.908  -1.137  -1.137  -1.137
48    G        -1.137  -1.137  -1.137  -0.808  -0.808  -0.808  -1.137  -1.137  -1.137
49    S        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
50    N        -1.137  -1.137  -1.137  -1.357  -1.351  -1.357  -1.137  -1.137  -1.137
51    S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
52    S        -1.137  -1.137  -1.137  -1.577  -1.578  -1.577  -1.137  -1.137  -1.137
53    N        -1.137  -1.137  -1.137  -0.716  -0.710  -0.716  -1.137  -1.137  -1.137
54    V        -1.137  -1.137  -1.137  -1.350  -1.351  -1.350  -1.137  -1.137  -1.137
55    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
56    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
57    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
58    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
59    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
60    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
61    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
62    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
63    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
64    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
65    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
66    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
67    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
68    T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
69    Y        -1.137  -1.137  -1.137  -0.896  -0.896  -0.896  -1.137  -1.137  -1.137
70    A        -1.137  -1.137  -1.137  -1.096  -1.097  -1.096  -1.137  -1.137  -1.137
71    N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
72    G        -1.137  -1.137  -1.137  -1.096  -1.097  -1.096  -1.137  -1.137  -1.137
73    T        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
74    N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
75    S        -1.137  -1.137  -1.137  -1.031  -1.031  -1.031  -1.137  -1.137  -1.137
76    T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
77    T        -1.137  -1.137  -1.137  -1.103  -1.097  -1.103  -1.137  -1.137  -1.137
78    N        -1.137  -1.137  -1.137  -1.357  -1.351  -1.357  -1.137  -1.137  -1.137
79    T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
80    T        -1.137  -1.137  -1.137  -1.231  -1.233  -1.231  -1.137  -1.137  -1.137
81    T        -1.137  -1.137  -1.137  -1.308  -1.309  -1.308  -1.137  -1.137  -1.137
82    A        -1.137  -1.137  -1.137  -1.116  -1.117  -1.116  -1.137  -1.137  -1.137
83    E        -1.137  -1.137  -1.137  -0.626  -0.626  -0.626  -1.137  -1.137  -1.137
84    S        -1.137  -1.137  -1.137  -1.238  -1.239  -1.238  -1.137  -1.137  -1.137
85    S        -1.137  -1.137  -1.137  -1.136  -1.137  -1.136  -1.137  -1.137  -1.137
86    Q         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
87    L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
88    Q         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
89    I        -1.137  -1.137  -1.137  -1.083  -1.084  -1.083  -1.137  -1.137  -1.137
90    I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
91    V        -1.137  -1.137  -1.137  -0.934  -0.934  -0.934  -1.137  -1.137  -1.137
92    T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
93    G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
94    G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
95    Q         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
96    V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
97    P        -1.137  -1.137  -1.137  -1.116  -1.117  -1.116  -1.137  -1.137  -1.137
98    I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
99    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
100   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
101   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
102   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
103   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
104   T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
105   N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
106   S        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
107   S        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
108   L        -1.137  -1.137  -1.137  -1.252  -1.253  -1.252  -1.137  -1.137  -1.137
109   T        -1.137  -1.137  -1.137  -0.915  -0.915  -0.915  -1.137  -1.137  -1.137
110   H        -1.137  -1.137  -1.137  -1.031  -1.031  -1.031  -1.137  -1.137  -1.137
111   T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
112   N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
113   Y        -1.137  -1.137  -1.137  -1.136  -1.137  -1.136  -1.137  -1.137  -1.137
114   T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
115   R        -1.137  -1.137  -1.137  -0.915  -0.915  -0.915  -1.137  -1.137  -1.137
116   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
117   F         0.877   0.877   0.877   1.139   1.139   1.139   0.877   0.877   0.877
118   N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
119   S        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
120   S        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
121   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
122   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
123   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
124   N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
125   I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
126   T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
127   E         0.877   0.877   0.877   1.156   1.156   1.156   0.877   0.877   0.877
128   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
129   Y         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
130   N        -1.137  -1.137  -1.137  -1.357  -1.351  -1.357  -1.137  -1.137  -1.137
131   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
132   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
133   R        -1.137  -1.137  -1.137  -0.915  -0.915  -0.915  -1.137  -1.137  -1.137
134   V        -1.137  -1.137  -1.137  -1.231  -1.233  -1.231  -1.137  -1.137  -1.137
135   V        -1.137  -1.137  -1.137  -1.083  -1.084  -1.083  -1.137  -1.137  -1.137
136   N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
137   E        -1.137  -1.137  -1.137  -0.626  -0.626  -0.626  -1.137  -1.137  -1.137
138   T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
139   I        -1.137  -1.137  -1.137  -0.992  -0.992  -0.992  -1.137  -1.137  -1.137
140   Q        -1.137  -1.137  -1.137  -1.004  -1.005  -1.004  -1.137  -1.137  -1.137
141   D         0.877   0.877   0.877   1.148   1.147   1.148   0.877   0.877   0.877
142   K        -1.137  -1.137  -1.137  -0.908  -0.903  -0.908  -1.137  -1.137  -1.137
143   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
144   S        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
145   A        -1.137  -1.137  -1.137  -1.103  -1.104  -1.103  -1.137  -1.137  -1.137
146   G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
147   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
148   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
149   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
150   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
151   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
152   N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
153   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
154   K         0.877   0.877   0.877   1.036   1.036   1.036   0.877   0.877   0.877
155   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
156   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
157   E         0.877   0.877   0.877   1.156   1.156   1.156   0.877   0.877   0.877
158   A        -1.137  -1.137  -1.137  -1.577  -1.578  -1.577  -1.137  -1.137  -1.137
159   V        -1.137  -1.137  -1.137  -1.177  -1.178  -1.177  -1.137  -1.137  -1.137
160   S        -1.137  -1.137  -1.137  -1.231  -1.233  -1.231  -1.137  -1.137  -1.137
161   F         0.877   0.877   0.877   1.139   1.139   1.139   0.877   0.877   0.877
162   F        -1.137  -1.137  -1.137  -0.864  -0.865  -0.864  -1.137  -1.137  -1.137
163   F        -1.137  -1.137  -1.137  -0.915  -0.915  -0.915  -1.137  -1.137  -1.137
164   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
165   I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
166   I        -1.137  -1.137  -1.137  -1.083  -1.084  -1.083  -1.137  -1.137  -1.137
167   F        -1.137  -1.137  -1.137  -0.864  -0.865  -0.864  -1.137  -1.137  -1.137
168   D         0.877   0.877   0.877   1.148   1.147   1.148   0.877   0.877   0.877
169   T        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
170   E        -1.137  -1.137  -1.137  -0.716  -0.716  -0.716  -1.137  -1.137  -1.137
171   K         0.877   0.877   0.877   1.036   1.036   1.036   0.877   0.877   0.877
172   P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
173   I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
174   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
175   V        -1.137  -1.137  -1.137  -1.083  -1.084  -1.083  -1.137  -1.137  -1.137
176   T        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
177   E        -1.137  -1.137  -1.137  -1.011  -1.012  -1.011  -1.137  -1.137  -1.137
178   D         0.877   0.877   0.877   1.148   1.147   1.148   0.877   0.877   0.877
179   S        -1.137  -1.137  -1.137  -1.143  -1.144  -1.143  -1.137  -1.137  -1.137
180   A        -1.137  -1.137  -1.137  -1.103  -1.104  -1.103  -1.137  -1.137  -1.137
181   Y        -1.137  -1.137  -1.137  -0.526  -0.526  -0.526  -1.137  -1.137  -1.137
182   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
183   I        -1.137  -1.137  -1.137  -0.992  -0.992  -0.992  -1.137  -1.137  -1.137
184   P        -1.137  -1.137  -1.137  -1.116  -1.117  -1.116  -1.137  -1.137  -1.137
185   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
186   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
187   N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
188   N        -1.137  -1.137  -1.137  -0.820  -0.815  -0.820  -1.137  -1.137  -1.137
189   K        -1.137  -1.137  -1.137  -0.992  -0.992  -0.992  -1.137  -1.137  -1.137
190   N        -1.137  -1.137  -1.137  -1.218  -1.212  -1.218  -1.137  -1.137  -1.137
191   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
192   T        -1.137  -1.137  -1.137  -0.790  -0.790  -0.790  -1.137  -1.137  -1.137
193   K        -1.137  -1.137  -1.137  -0.908  -0.903  -0.908  -1.137  -1.137  -1.137
194   R         0.877   0.877   0.877   1.282   1.282   1.282   0.877   0.877   0.877
195   G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
196   V        -1.137  -1.137  -1.137  -1.044  -1.044  -1.044  -1.137  -1.137  -1.137
197   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
198   S        -1.137  -1.137  -1.137  -1.495  -1.496  -1.495  -1.137  -1.137  -1.137
199   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
200   T        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
201   S        -1.137  -1.137  -1.137  -1.238  -1.239  -1.238  -1.137  -1.137  -1.137
202   D        -1.137  -1.137  -1.137  -0.638  -0.638  -0.638  -1.137  -1.137  -1.137
203   K        -1.137  -1.137  -1.137  -0.796  -0.796  -0.796  -1.137  -1.137  -1.137
204   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
205   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
206   Y         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
207   S        -1.137  -1.137  -1.137  -1.577  -1.578  -1.577  -1.137  -1.137  -1.137
208   G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
209   V        -1.137  -1.137  -1.137  -1.083  -1.084  -1.083  -1.137  -1.137  -1.137
210   F         0.877   0.877   0.877   1.139   1.139   1.139   0.877   0.877   0.877
211   T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
212   P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
213   P        -1.137  -1.137  -1.137  -1.252  -1.253  -1.252  -1.137  -1.137  -1.137
214   T        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
215   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
216   C        -1.137  -1.137  -1.137  -0.698  -0.692  -0.698  -1.137  -1.137  -1.137
217   S        -1.137  -1.137  -1.137  -1.577  -1.578  -1.577  -1.137  -1.137  -1.137
218   Y        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
219   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
220   A        -1.137  -1.137  -1.137  -1.350  -1.351  -1.350  -1.137  -1.137  -1.137
221   G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
222   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
223   P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
224   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
225   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
226   I        -1.137  -1.137  -1.137  -1.083  -1.084  -1.083  -1.137  -1.137  -1.137
227   V        -1.137  -1.137  -1.137  -1.083  -1.084  -1.083  -1.137  -1.137  -1.137
228   D         0.877   0.877   0.877   1.148   1.147   1.148   0.877   0.877   0.877
229   D         0.877   0.877   0.877   1.148   1.147   1.148   0.877   0.877   0.877
230   Q        -1.137  -1.137  -1.137  -1.004  -1.005  -1.004  -1.137  -1.137  -1.137
231   D        -1.137  -1.137  -1.137  -0.722  -0.723  -0.722  -1.137  -1.137  -1.137
232   E        -1.137  -1.137  -1.137  -0.716  -0.716  -0.716  -1.137  -1.137  -1.137
233   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
234   K        -1.137  -1.137  -1.137  -0.710  -0.710  -0.710  -1.137  -1.137  -1.137
235   W         0.877   0.877   0.877   1.307   1.307   1.307   0.877   0.877   0.877
236   F         0.877   0.877   0.877   1.139   1.139   1.139   0.877   0.877   0.877
237   F         0.877   0.877   0.877   1.139   1.139   1.139   0.877   0.877   0.877
238   D        -1.137  -1.137  -1.137  -1.150  -1.151  -1.150  -1.137  -1.137  -1.137
239   A        -1.137  -1.137  -1.137  -1.116  -1.117  -1.116  -1.137  -1.137  -1.137
240   S        -1.137  -1.137  -1.137  -1.577  -1.578  -1.577  -1.137  -1.137  -1.137
241   K        -1.137  -1.137  -1.137  -0.814  -0.815  -0.814  -1.137  -1.137  -1.137
242   P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
243   T        -1.137  -1.137  -1.137  -1.308  -1.309  -1.308  -1.137  -1.137  -1.137
244   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
245   I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
246   S        -1.137  -1.137  -1.137  -1.357  -1.351  -1.357  -1.137  -1.137  -1.137
247   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
248   D        -1.137  -1.137  -1.137  -0.827  -0.821  -0.827  -1.137  -1.137  -1.137
249   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
250   I        -1.137  -1.137  -1.137  -1.044  -1.044  -1.044  -1.137  -1.137  -1.137
251   I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
252   R         0.877   0.877   0.877   1.282   1.282   1.282   0.877   0.877   0.877
253   K        -1.137  -1.137  -1.137  -1.031  -1.031  -1.031  -1.137  -1.137  -1.137
254   E        -1.137  -1.137  -1.137  -0.820  -0.815  -0.820  -1.137  -1.137  -1.137
255   Y         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
256   S        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
257   N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
258   F         0.877   0.877   0.877   1.139   1.139   1.139   0.877   0.877   0.877
259   T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
260   T        -1.137  -1.137  -1.137  -1.103  -1.097  -1.103  -1.137  -1.137  -1.137
261   P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
262   Y        -1.137  -1.137  -1.137  -0.896  -0.896  -0.896  -1.137  -1.137  -1.137
263   G        -1.137  -1.137  -1.137  -0.716  -0.716  -0.716  -1.137  -1.137  -1.137
264   L        -1.137  -1.137  -1.137  -0.992  -0.992  -0.992  -1.137  -1.137  -1.137
265   L        -1.137  -1.137  -1.137  -0.852  -0.852  -0.852  -1.137  -1.137  -1.137
266   E        -1.137  -1.137  -1.137  -0.644  -0.644  -0.644  -1.137  -1.137  -1.137
267   N        -1.137  -1.137  -1.137  -1.218  -1.212  -1.218  -1.137  -1.137  -1.137
268   G        -1.137  -1.137  -1.137  -1.096  -1.097  -1.096  -1.137  -1.137  -1.137
269   V        -1.137  -1.137  -1.137  -1.231  -1.233  -1.231  -1.137  -1.137  -1.137
270   P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
271   I        -1.137  -1.137  -1.137  -0.992  -0.992  -0.992  -1.137  -1.137  -1.137
272   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
273   P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
274   I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
275   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
276   Y         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
277   D         0.877   0.877   0.877   1.148   1.147   1.148   0.877   0.877   0.877
278   G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
279   G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
280   Y         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
281   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
282   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
283   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
284   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
285   I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
286   D        -1.137  -1.137  -1.137  -1.150  -1.151  -1.150  -1.137  -1.137  -1.137
287   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
288   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
289   S        -1.137  -1.137  -1.137  -1.577  -1.578  -1.577  -1.137  -1.137  -1.137
290   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
291   A        -1.137  -1.137  -1.137  -1.308  -1.309  -1.308  -1.137  -1.137  -1.137
292   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
293   Q         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
294   G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
295   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
296   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
297   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
298   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
299   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
300   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
301   G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
302   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
303   T        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
304   N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
305   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
306   T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
307   S        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
308   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
309   T         0.877   0.877   0.877   0.771   0.770   0.771   0.877   0.877   0.877
310   I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
311   E         0.877   0.877   0.877   1.156   1.156   1.156   0.877   0.877   0.877
312   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
313   T        -1.137  -1.137  -1.137  -1.308  -1.309  -1.308  -1.137  -1.137  -1.137
314   E        -1.137  -1.137  -1.137  -0.626  -0.626  -0.626  -1.137  -1.137  -1.137
315   I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
316   P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
317   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
318   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
319   Y         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
320   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
321   Q        -1.137  -1.137  -1.137  -0.814  -0.808  -0.814  -1.137  -1.137  -1.137
322   A        -1.137  -1.137  -1.137  -1.577  -1.578  -1.577  -1.137  -1.137  -1.137
323   N        -1.137  -1.137  -1.137  -0.902  -0.896  -0.902  -1.137  -1.137  -1.137
324   T        -1.137  -1.137  -1.137  -1.308  -1.309  -1.308  -1.137  -1.137  -1.137
325   P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
326   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
327   N        -1.137  -1.137  -1.137  -1.103  -1.097  -1.103  -1.137  -1.137  -1.137
328   F        -1.137  -1.137  -1.137  -0.740  -0.741  -0.740  -1.137  -1.137  -1.137
329   I        -1.137  -1.137  -1.137  -1.083  -1.084  -1.083  -1.137  -1.137  -1.137
330   D        -1.137  -1.137  -1.137  -1.150  -1.151  -1.150  -1.137  -1.137  -1.137
331   N        -1.137  -1.137  -1.137  -1.357  -1.351  -1.357  -1.137  -1.137  -1.137
332   K         0.877   0.877   0.877   1.036   1.036   1.036   0.877   0.877   0.877
333   D         0.877   0.877   0.877   1.148   1.147   1.148   0.877   0.877   0.877
334   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
335   P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
336   K        -1.137  -1.137  -1.137  -0.710  -0.710  -0.710  -1.137  -1.137  -1.137
337   N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
338   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
339   V        -1.137  -1.137  -1.137  -1.177  -1.178  -1.177  -1.137  -1.137  -1.137
340   G        -1.137  -1.137  -1.137  -1.231  -1.233  -1.231  -1.137  -1.137  -1.137
341   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
342   G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
343   Y         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
344   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
345   S        -1.137  -1.137  -1.137  -1.451  -1.452  -1.451  -1.137  -1.137  -1.137
346   P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
347   I        -1.137  -1.137  -1.137  -1.083  -1.084  -1.083  -1.137  -1.137  -1.137
348   K         0.877   0.877   0.877   1.036   1.036   1.036   0.877   0.877   0.877
349   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
350   Q         0.877   0.877   0.877   1.165   1.164   1.165   0.877   0.877   0.877
351   I        -1.137  -1.137  -1.137  -0.992  -0.992  -0.992  -1.137  -1.137  -1.137
352   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
353   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
354   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
355   I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
356   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
357   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
358   V        -1.137  -1.137  -1.137  -1.083  -1.084  -1.083  -1.137  -1.137  -1.137
359   N         0.877   0.877   0.877   0.887   0.896   0.887   0.877   0.877   0.877
360   G         0.877   0.877   0.877   1.045   1.044   1.045   0.877   0.877   0.877
361   V         0.877   0.877   0.877   0.716   0.715   0.716   0.877   0.877   0.877
362   T        -1.137  -1.137  -1.137  -1.103  -1.097  -1.103  -1.137  -1.137  -1.137
363   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
364   K        -1.137  -1.137  -1.137  -0.722  -0.723  -0.722  -1.137  -1.137  -1.137
365   S        -1.137  -1.137  -1.137  -1.143  -1.144  -1.143  -1.137  -1.137  -1.137
366   A         0.877   0.877   0.877   0.615   0.614   0.615   0.877   0.877   0.877
367   L         0.877   0.877   0.877   0.843   0.842   0.843   0.877   0.877   0.877
368   E        -1.137  -1.137  -1.137  -0.532  -0.532  -0.532  -1.137  -1.137  -1.137
369   S         0.877   0.877   0.877   0.426   0.425   0.426   0.877   0.877   0.877
370   I         0.877   0.877   0.877   0.967   0.966   0.967   0.877   0.877   0.877
371   F         0.877   0.877   0.877   1.139   1.139   1.139   0.877   0.877   0.877
372   P         0.877   0.877   0.877   1.019   1.018   1.019   0.877   0.877   0.877
373   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/P38616
Output conservation file - output/P38616
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
