1     M         1.651   1.654   1.671   1.908   1.915   1.939   1.757   1.761   1.782
2     A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
3     Y        -1.133  -1.129  -1.113  -1.030  -1.025  -0.996  -0.995  -0.989  -0.961
4     S        -1.133  -1.129  -1.113  -1.152  -1.141  -1.118  -0.995  -0.989  -0.961
5     L         0.038   0.052   0.008  -0.163  -0.145  -0.190  -0.077  -0.055  -0.124
6     T         0.038   0.006  -0.013   0.090   0.038   0.007  -0.077  -0.127  -0.157
7     R         1.651   1.654   1.671   1.694   1.699   1.726   1.757   1.761   1.782
8     K         0.038   0.052   0.008   0.028   0.052  -0.024  -0.077  -0.055  -0.124
9     L         1.651   1.654   1.671   1.350   1.354   1.382   1.757   1.761   1.782
10    L         1.651   1.654   1.671   1.350   1.354   1.382   1.757   1.761   1.782
11    K         0.038   0.065   0.009   0.024   0.068  -0.027  -0.077  -0.035  -0.123
12    D         0.038   0.065   0.009   0.135   0.178   0.085  -0.077  -0.035  -0.123
13    W         1.651   1.654   1.671   1.977   1.983   2.009   1.757   1.761   1.782
14    K         1.651   1.654   1.671   1.703   1.710   1.735   1.757   1.761   1.782
15    Y        -1.133  -1.129  -1.113  -1.030  -1.028  -0.996  -0.995  -0.989  -0.961
16    F        -1.133  -1.129  -1.113  -1.186  -1.197  -1.152  -0.995  -0.989  -0.961
17    M        -1.133  -1.129  -1.113  -1.169  -1.174  -1.135  -0.995  -0.989  -0.961
18    R         0.038   0.006  -0.013   0.045  -0.009  -0.040  -0.077  -0.127  -0.157
19    H        -1.133  -1.129  -1.113  -1.014  -1.006  -0.980  -0.995  -0.989  -0.961
20    P        -1.133  -1.129  -1.113  -1.003  -1.001  -0.969  -0.995  -0.989  -0.961
21    E        -1.133  -1.129  -1.113  -1.036  -1.034  -1.002  -0.995  -0.989  -0.961
22    K        -1.133  -1.129  -1.113  -1.135  -1.139  -1.101  -0.995  -0.989  -0.961
23    T         0.038   0.052   0.008   0.078   0.102   0.028  -0.077  -0.055  -0.124
24    Q        -0.105  -0.104  -0.086   0.002   0.005   0.035  -0.307  -0.304  -0.275
25    G        -0.105  -0.104  -0.086   0.037   0.040   0.070  -0.307  -0.304  -0.275
26    L         1.651   1.654   1.671   1.383   1.389   1.415   1.757   1.761   1.782
27    F         0.038   0.006  -0.013   0.239   0.191   0.161  -0.077  -0.127  -0.157
28    H         0.038   0.052   0.008   0.114   0.138   0.066  -0.077  -0.055  -0.124
29    V        -1.133  -1.129  -1.113  -0.891  -0.888  -0.858  -0.995  -0.989  -0.961
30    R         0.038   0.065   0.009   0.028   0.074  -0.024  -0.077  -0.035  -0.123
31    P         1.651   1.654   1.671   1.766   1.771   1.798   1.757   1.761   1.782
32    H         0.038   0.006  -0.013   0.135   0.084   0.054  -0.077  -0.127  -0.157
33    D         0.038   0.006  -0.013   0.126   0.076   0.041  -0.077  -0.127  -0.157
34    S         1.651   1.654   1.671   1.520   1.525   1.552   1.757   1.761   1.782
35    D         0.038   0.065   0.009  -0.056  -0.012  -0.100  -0.077  -0.035  -0.123
36    L         0.038   0.052   0.008  -0.193  -0.175  -0.224  -0.077  -0.055  -0.124
37    H        -1.133  -1.129  -1.113  -0.923  -0.914  -0.889  -0.995  -0.989  -0.961
38    L        -1.133  -1.129  -1.113  -1.175  -1.156  -1.141  -0.995  -0.989  -0.961
39    W         1.651   1.654   1.671   1.977   1.983   2.009   1.757   1.761   1.782
40    H         0.038   0.006  -0.013   0.016  -0.045  -0.085  -0.077  -0.127  -0.157
41    V         0.038   0.006  -0.013   0.151   0.097   0.061  -0.077  -0.127  -0.157
42    V         1.651   1.654   1.671   1.811   1.817   1.843   1.757   1.761   1.782
43    M         0.038   0.065   0.009  -0.193  -0.157  -0.224  -0.077  -0.035  -0.123
44    Y        -1.133  -1.129  -1.113  -1.030  -1.025  -0.996  -0.995  -0.989  -0.961
45    E         0.038   0.065   0.009   0.126   0.173   0.078  -0.077  -0.035  -0.123
46    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
47    P        -1.133  -1.129  -1.113  -1.019  -1.015  -0.985  -0.995  -0.989  -0.961
48    R        -1.133  -1.129  -1.113  -1.141  -1.145  -1.107  -0.995  -0.989  -0.961
49    T         0.038   0.006  -0.013   0.045  -0.012  -0.046  -0.077  -0.127  -0.157
50    S        -1.133  -1.129  -1.113  -1.063  -1.048  -1.029  -0.995  -0.989  -0.961
51    L         0.038   0.052   0.008  -0.272  -0.253  -0.312  -0.077  -0.055  -0.124
52    E         1.651   1.654   1.671   1.784   1.786   1.816   1.757   1.761   1.782
53    V         0.038   0.065   0.009  -0.241  -0.204  -0.277  -0.077  -0.035  -0.123
54    Y         1.651   1.654   1.671   1.793   1.800   1.825   1.757   1.761   1.782
55    L        -1.133  -1.129  -1.113  -1.164  -1.143  -1.130  -0.995  -0.989  -0.961
56    L         0.038   0.006  -0.013  -0.241  -0.288  -0.306  -0.077  -0.127  -0.157
57    L         0.038   0.006  -0.013  -0.241  -0.288  -0.306  -0.077  -0.127  -0.157
58    Y         0.038   0.006  -0.013   0.171   0.122   0.088  -0.077  -0.127  -0.157
59    I         0.038   0.052   0.008  -0.085  -0.057  -0.157  -0.077  -0.055  -0.124
60    G        -1.133  -1.129  -1.113  -1.074  -1.079  -1.040  -0.995  -0.989  -0.961
61    G        -1.133  -1.129  -1.113  -0.886  -0.884  -0.852  -0.995  -0.989  -0.961
62    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
63    -         1.651   1.654   1.671   1.767   1.773   1.799   1.757   1.761   1.782
64    -        -0.105  -0.104  -0.086  -0.054  -0.051  -0.021  -0.307  -0.304  -0.275
65    N         1.651   1.654   1.671   1.576   1.581   1.608   1.757   1.761   1.782
66    D         0.038   0.006  -0.013   0.126   0.076   0.041  -0.077  -0.127  -0.157
67    Q        -0.105  -0.104  -0.086   0.091   0.094   0.124  -0.307  -0.304  -0.275
68    D        -1.133  -1.129  -1.113  -1.096  -1.088  -1.062  -0.995  -0.989  -0.961
69    P         0.038   0.052   0.008   0.007   0.032  -0.056  -0.077  -0.055  -0.124
70    Y         0.038   0.065   0.009   0.114   0.160   0.067  -0.077  -0.035  -0.123
71    I         1.651   1.654   1.671   1.748   1.756   1.780   1.757   1.761   1.782
72    I        -1.133  -1.129  -1.113  -1.227  -1.237  -1.193  -0.995  -0.989  -0.961
73    M         0.038   0.006  -0.013   0.065  -0.004  -0.059  -0.077  -0.127  -0.157
74    K         0.038   0.006  -0.013  -0.026  -0.085  -0.125  -0.077  -0.127  -0.157
75    C         1.651   1.654   1.671   1.908   1.913   1.939   1.757   1.761   1.782
76    L         1.651   1.654   1.671   1.350   1.354   1.382   1.757   1.761   1.782
77    S         0.038   0.065   0.009  -0.035   0.014  -0.096  -0.077  -0.035  -0.123
78    P         1.651   1.654   1.671   1.766   1.771   1.798   1.757   1.761   1.782
79    N         1.651   1.654   1.671   1.576   1.581   1.608   1.757   1.761   1.782
80    C        -1.133  -1.129  -1.113  -1.019  -1.017  -0.985  -0.995  -0.989  -0.961
81    C         0.038   0.052   0.008   0.219   0.243   0.162  -0.077  -0.055  -0.124
82    F        -1.133  -1.129  -1.113  -1.215  -1.205  -1.181  -0.995  -0.989  -0.961
83    P         1.651   1.654   1.671   1.766   1.771   1.798   1.757   1.761   1.782
84    I         0.038   0.006  -0.013   0.122   0.072   0.040  -0.077  -0.127  -0.157
85    N         1.651   1.654   1.671   1.576   1.581   1.608   1.757   1.761   1.782
86    R         0.038   0.006  -0.013   0.024  -0.031  -0.064  -0.077  -0.127  -0.157
87    T         0.038   0.052   0.008  -0.009   0.015  -0.069  -0.077  -0.055  -0.124
88    V         0.038   0.006  -0.013   0.151   0.097   0.061  -0.077  -0.127  -0.157
89    S         0.038   0.006  -0.013  -0.039  -0.084  -0.103  -0.077  -0.127  -0.157
90    M         0.038   0.065   0.009  -0.193  -0.157  -0.224  -0.077  -0.035  -0.123
91    T         0.038   0.006  -0.013  -0.009  -0.070  -0.109  -0.077  -0.127  -0.157
92    H         1.651   1.654   1.671   1.748   1.754   1.780   1.757   1.761   1.782
93    L         1.651   1.654   1.671   1.350   1.354   1.382   1.757   1.761   1.782
94    N        -1.133  -1.129  -1.113  -1.215  -1.216  -1.181  -0.995  -0.989  -0.961
95    Y        -1.133  -1.129  -1.113  -1.091  -1.084  -1.057  -0.995  -0.989  -0.961
96    L         0.038   0.006  -0.013  -0.241  -0.288  -0.306  -0.077  -0.127  -0.157
97    L         1.651   1.654   1.671   1.350   1.354   1.382   1.757   1.761   1.782
98    L         1.651   1.654   1.671   1.350   1.354   1.382   1.757   1.761   1.782
99    K        -0.105  -0.104  -0.086  -0.463  -0.461  -0.430  -0.307  -0.304  -0.275
100   D        -1.133  -1.129  -1.113  -1.096  -1.098  -1.062  -0.995  -0.989  -0.961
101   L        -1.133  -1.129  -1.113  -1.238  -1.221  -1.204  -0.995  -0.989  -0.961
102   G         1.651   1.654   1.671   1.890   1.900   1.922   1.757   1.761   1.782
103   L         0.038   0.052   0.008  -0.233  -0.213  -0.268  -0.077  -0.055  -0.124
104   Q        -1.133  -1.129  -1.113  -0.839  -0.832  -0.806  -0.995  -0.989  -0.961
105   D        -1.133  -1.129  -1.113  -1.181  -1.181  -1.147  -0.995  -0.989  -0.961
106   L         0.038   0.006  -0.013  -0.233  -0.277  -0.296  -0.077  -0.127  -0.157
107   L        -1.133  -1.129  -1.113  -1.238  -1.220  -1.204  -0.995  -0.989  -0.961
108   F        -1.133  -1.129  -1.113  -0.944  -0.938  -0.910  -0.995  -0.989  -0.961
109   H         1.651   1.654   1.671   1.748   1.754   1.780   1.757   1.761   1.782
110   I         0.038   0.006  -0.013  -0.085  -0.152  -0.204  -0.077  -0.127  -0.157
111   W         0.038   0.006  -0.013   0.131   0.060   0.004  -0.077  -0.127  -0.157
112   Q        -1.133  -1.129  -1.113  -1.019  -1.025  -0.985  -0.995  -0.989  -0.961
113   P        -1.133  -1.129  -1.113  -1.052  -1.058  -1.018  -0.995  -0.989  -0.961
114   L        -1.133  -1.129  -1.113  -1.215  -1.199  -1.181  -0.995  -0.989  -0.961
115   F         0.038   0.006  -0.013   0.187   0.136   0.100  -0.077  -0.127  -0.157
116   H        -0.105  -0.104  -0.086  -0.178  -0.175  -0.145  -0.307  -0.304  -0.275
117   I        -0.105  -0.104  -0.086  -0.178  -0.175  -0.145  -0.307  -0.304  -0.275
118   Q        -0.105  -0.104  -0.086  -0.087  -0.084  -0.054  -0.307  -0.304  -0.275
119   A        -0.105  -0.104  -0.086  -0.051  -0.048  -0.018  -0.307  -0.304  -0.275
120   T         0.038   0.006  -0.013  -0.035  -0.097  -0.139  -0.077  -0.127  -0.157
121   E        -1.133  -1.129  -1.113  -1.279  -1.276  -1.245  -0.995  -0.989  -0.961
122   D        -1.133  -1.129  -1.113  -0.824  -0.813  -0.790  -0.995  -0.989  -0.961
123   L        -1.133  -1.129  -1.113  -1.399  -1.384  -1.365  -0.995  -0.989  -0.961
124   Q         0.038   0.065   0.009  -0.022   0.018  -0.063  -0.077  -0.035  -0.123
125   Y        -1.133  -1.129  -1.113  -1.102  -1.094  -1.068  -0.995  -0.989  -0.961
126   S         0.038   0.065   0.009  -0.035   0.014  -0.096  -0.077  -0.035  -0.123
127   P        -1.133  -1.129  -1.113  -0.949  -0.943  -0.916  -0.995  -0.989  -0.961
128   S        -1.133  -1.129  -1.113  -1.135  -1.121  -1.101  -0.995  -0.989  -0.961
129   T        -1.133  -1.129  -1.113  -1.147  -1.139  -1.113  -0.995  -0.989  -0.961
130   V        -1.133  -1.129  -1.113  -1.152  -1.147  -1.118  -0.995  -0.989  -0.961
131   K         0.038   0.052   0.008   0.028   0.052  -0.024  -0.077  -0.055  -0.124
132   F         0.038   0.065   0.009  -0.233  -0.195  -0.267  -0.077  -0.035  -0.123
133   N        -1.133  -1.129  -1.113  -0.897  -0.881  -0.863  -0.995  -0.989  -0.961
134   R        -1.133  -1.129  -1.113  -0.933  -0.920  -0.900  -0.995  -0.989  -0.961
135   A         0.038   0.052   0.008   0.195   0.224   0.127  -0.077  -0.055  -0.124
136   W         1.651   1.654   1.671   1.977   1.983   2.009   1.757   1.761   1.782
137   N         1.651   1.654   1.671   1.576   1.581   1.608   1.757   1.761   1.782
138   R         1.651   1.654   1.671   1.694   1.699   1.726   1.757   1.761   1.782
139   I         1.651   1.654   1.671   1.748   1.756   1.780   1.757   1.761   1.782
140   I        -1.133  -1.129  -1.113  -0.891  -0.879  -0.858  -0.995  -0.989  -0.961
141   Y        -1.133  -1.129  -1.113  -0.865  -0.860  -0.831  -0.995  -0.989  -0.961
142   K         1.651   1.654   1.671   1.703   1.710   1.735   1.757   1.761   1.782
143   D         0.038   0.006  -0.013   0.126   0.076   0.041  -0.077  -0.127  -0.157
144   F         1.651   1.654   1.671   1.829   1.837   1.860   1.757   1.761   1.782
145   K         0.038   0.052   0.008   0.082   0.105   0.035  -0.077  -0.055  -0.124
146   S        -1.133  -1.129  -1.113  -1.309  -1.305  -1.275  -0.995  -0.989  -0.961
147   Y        -1.133  -1.129  -1.113  -0.912  -0.903  -0.879  -0.995  -0.989  -0.961
148   F         0.038   0.006  -0.013   0.065   0.004  -0.043  -0.077  -0.127  -0.157
149   P         1.651   1.654   1.671   1.766   1.771   1.798   1.757   1.761   1.782
150   E         0.038   0.006  -0.013   0.102   0.042   0.009  -0.077  -0.127  -0.157
151   L         1.651   1.654   1.671   1.350   1.354   1.382   1.757   1.761   1.782
152   I        -1.133  -1.129  -1.113  -0.881  -0.873  -0.847  -0.995  -0.989  -0.961
153   G         1.651   1.654   1.671   1.835   1.841   1.867   1.757   1.761   1.782
154   T        -0.105  -0.104  -0.086  -0.434  -0.431  -0.400  -0.307  -0.304  -0.275
155   L         1.651   1.654   1.671   1.383   1.389   1.415   1.757   1.761   1.782
156   Q         1.651   1.654   1.671   1.860   1.866   1.891   1.757   1.761   1.782
157   P        -0.105  -0.104  -0.086  -0.034  -0.031  -0.001  -0.307  -0.304  -0.275
158   G         1.651   1.654   1.671   1.835   1.841   1.867   1.757   1.761   1.782
159   D         1.651   1.654   1.671   1.709   1.715   1.741   1.757   1.761   1.782
160   Y         1.651   1.654   1.671   1.785   1.791   1.817   1.757   1.761   1.782
161   S        -0.105  -0.104  -0.086  -0.347  -0.344  -0.313  -0.307  -0.304  -0.275
162   I        -0.105  -0.104  -0.086  -0.434  -0.431  -0.400  -0.307  -0.304  -0.275
163   V         1.651   1.654   1.671   1.810   1.816   1.842   1.757   1.761   1.782
164   K        -0.105  -0.104  -0.086  -0.224  -0.221  -0.191  -0.307  -0.304  -0.275
165   S         1.651   1.654   1.671   1.529   1.534   1.561   1.757   1.761   1.782
166   Y         1.651   1.654   1.671   1.785   1.791   1.817   1.757   1.761   1.782
167   S        -0.105  -0.104  -0.086  -0.347  -0.344  -0.313  -0.307  -0.304  -0.275
168   K        -1.133  -1.129  -1.113  -1.030  -1.025  -0.996  -0.995  -0.989  -0.961
169   N        -1.133  -1.129  -1.113  -1.303  -1.301  -1.269  -0.995  -0.989  -0.961
170   H        -1.133  -1.129  -1.113  -1.238  -1.226  -1.204  -0.995  -0.989  -0.961
171   N         0.038   0.006  -0.013  -0.171  -0.231  -0.270  -0.077  -0.127  -0.157
172   I        -1.133  -1.129  -1.113  -0.855  -0.848  -0.821  -0.995  -0.989  -0.961
173   S        -1.133  -1.129  -1.113  -1.181  -1.170  -1.147  -0.995  -0.989  -0.961
174   N         0.038   0.065   0.009   0.098   0.147   0.037  -0.077  -0.035  -0.123
175   S         0.038   0.006  -0.013  -0.128  -0.180  -0.208  -0.077  -0.127  -0.157
176   N        -1.133  -1.129  -1.113  -1.063  -1.051  -1.029  -0.995  -0.989  -0.961
177   G        -1.133  -1.129  -1.113  -1.003  -0.995  -0.969  -0.995  -0.989  -0.961
178   G        -1.133  -1.129  -1.113  -1.019  -1.010  -0.985  -0.995  -0.989  -0.961
179   S         0.038   0.006  -0.013  -0.039  -0.083  -0.103  -0.077  -0.127  -0.157
180   V         1.651   1.654   1.671   1.820   1.826   1.851   1.757   1.761   1.782
181   N         1.651   1.654   1.671   1.557   1.562   1.589   1.757   1.761   1.782
182   E         1.651   1.654   1.671   1.795   1.801   1.827   1.757   1.761   1.782
183   F        -1.133  -1.129  -1.113  -1.052  -1.043  -1.018  -0.995  -0.989  -0.961
184   M        -1.133  -1.129  -1.113  -1.063  -1.079  -1.029  -0.995  -0.989  -0.961
185   S         0.038   0.006  -0.013  -0.073  -0.120  -0.143  -0.077  -0.127  -0.157
186   S         0.038   0.065   0.009  -0.035   0.014  -0.096  -0.077  -0.035  -0.123
187   Y        -0.105  -0.104  -0.086  -0.142  -0.139  -0.108  -0.307  -0.304  -0.275
188   N        -1.133  -1.129  -1.113  -1.102  -1.088  -1.068  -0.995  -0.989  -0.961
189   A         0.038   0.052   0.008   0.302   0.327   0.246  -0.077  -0.055  -0.124
190   Q         0.038   0.052   0.008   0.247   0.269   0.201  -0.077  -0.055  -0.124
191   S         0.038   0.052   0.008  -0.107  -0.083  -0.150  -0.077  -0.055  -0.124
192   H        -1.133  -1.129  -1.113  -0.960  -0.949  -0.926  -0.995  -0.989  -0.961
193   T        -1.133  -1.129  -1.113  -1.169  -1.161  -1.135  -0.995  -0.989  -0.961
194   F         0.038   0.006  -0.013   0.090   0.031  -0.014  -0.077  -0.127  -0.157
195   H         0.038   0.052   0.008   0.114   0.138   0.066  -0.077  -0.055  -0.124
196   A        -1.133  -1.129  -1.113  -0.860  -0.860  -0.826  -0.995  -0.989  -0.961
197   Q        -1.133  -1.129  -1.113  -0.912  -0.910  -0.879  -0.995  -0.989  -0.961
198   D        -1.133  -1.129  -1.113  -0.998  -0.992  -0.964  -0.995  -0.989  -0.961
199   N         1.651   1.654   1.671   1.576   1.581   1.608   1.757   1.761   1.782
200   S         0.038   0.052   0.008  -0.137  -0.114  -0.184  -0.077  -0.055  -0.124
201   K        -1.133  -1.129  -1.113  -0.955  -0.948  -0.921  -0.995  -0.989  -0.961
202   N        -1.133  -1.129  -1.113  -1.158  -1.149  -1.124  -0.995  -0.989  -0.961
203   P         0.038   0.006  -0.013  -0.068  -0.138  -0.188  -0.077  -0.127  -0.157
204   Y        -1.133  -1.129  -1.113  -0.987  -0.983  -0.953  -0.995  -0.989  -0.961
205   T         0.038   0.065   0.009  -0.128  -0.086  -0.173  -0.077  -0.035  -0.123
206   N         0.038   0.006  -0.013  -0.085  -0.138  -0.169  -0.077  -0.127  -0.157
207   S         0.038   0.052   0.008  -0.047  -0.025  -0.084  -0.077  -0.055  -0.124
208   S        -0.105  -0.104  -0.086  -0.383  -0.381  -0.350  -0.307  -0.304  -0.275
209   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
210   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
211   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
212   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
213   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
214   M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
215   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
216   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
217   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
218   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
219   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
220   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
221   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
222   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
223   V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
224   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
225   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
226   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
227   T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
228   H        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
229   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
230   Y        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
231   N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
232   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
233   I        -0.105  -0.104  -0.086  -0.171  -0.168  -0.138  -0.307  -0.304  -0.275
234   D        -0.105  -0.104  -0.086  -0.144  -0.141  -0.111  -0.307  -0.304  -0.275
235   F        -0.105  -0.104  -0.086  -0.029  -0.026   0.004  -0.307  -0.304  -0.275
236   M        -1.133  -1.129  -1.113  -1.152  -1.142  -1.118  -0.995  -0.989  -0.961
237   T         1.651   1.654   1.671   1.721   1.726   1.753   1.757   1.761   1.782
238   K         0.038   0.065   0.009   0.073   0.119   0.021  -0.077  -0.035  -0.123
239   N         1.651   1.654   1.671   1.576   1.581   1.608   1.757   1.761   1.782
240   L        -1.133  -1.129  -1.113  -1.215  -1.200  -1.181  -0.995  -0.989  -0.961
241   L         0.038   0.006  -0.013  -0.272  -0.320  -0.343  -0.077  -0.127  -0.157
242   A         0.038   0.006  -0.013   0.282   0.225   0.184  -0.077  -0.127  -0.157
243   C         0.038   0.006  -0.013   0.163   0.100   0.056  -0.077  -0.127  -0.157
244   D         0.038   0.006  -0.013   0.126   0.076   0.041  -0.077  -0.127  -0.157
245   D         0.038   0.052   0.008   0.007   0.038  -0.056  -0.077  -0.055  -0.124
246   D        -1.133  -1.129  -1.113  -0.949  -0.937  -0.916  -0.995  -0.989  -0.961
247   S         0.038   0.052   0.008  -0.107  -0.086  -0.150  -0.077  -0.055  -0.124
248   I        -1.133  -1.129  -1.113  -1.141  -1.133  -1.107  -0.995  -0.989  -0.961
249   H         0.038   0.006  -0.013   0.135   0.084   0.054  -0.077  -0.127  -0.157
250   -        -0.105  -0.104  -0.086  -0.476  -0.474  -0.443  -0.307  -0.304  -0.275
251   -        -0.105  -0.104  -0.086  -0.083  -0.080  -0.050  -0.307  -0.304  -0.275
252   -        -0.105  -0.104  -0.086  -0.112  -0.109  -0.079  -0.307  -0.304  -0.275
253   -         1.651   1.654   1.671   1.913   1.919   1.945   1.757   1.761   1.782
254   P        -1.133  -1.129  -1.113  -1.019  -1.019  -0.985  -0.995  -0.989  -0.961
255   V        -1.133  -1.129  -1.113  -1.019  -1.017  -0.985  -0.995  -0.989  -0.961
256   V        -1.133  -1.129  -1.113  -0.933  -0.926  -0.900  -0.995  -0.989  -0.961
257   S        -1.133  -1.129  -1.113  -1.175  -1.170  -1.141  -0.995  -0.989  -0.961
258   S        -1.133  -1.129  -1.113  -1.158  -1.152  -1.124  -0.995  -0.989  -0.961
259   K        -1.133  -1.129  -1.113  -0.870  -0.857  -0.837  -0.995  -0.989  -0.961
260   R        -1.133  -1.129  -1.113  -1.244  -1.256  -1.210  -0.995  -0.989  -0.961
261   S         1.651   1.654   1.671   1.520   1.525   1.552   1.757   1.761   1.782
262   R         0.038   0.065   0.009  -0.141  -0.098  -0.188  -0.077  -0.035  -0.123
263   T        -1.133  -1.129  -1.113  -1.232  -1.218  -1.198  -0.995  -0.989  -0.961
264   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
265   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
266   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
267   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
268   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
269   L         1.651   1.654   1.671   1.388   1.393   1.420   1.757   1.761   1.782
270   A        -0.105  -0.104  -0.086  -0.038  -0.035  -0.005  -0.307  -0.304  -0.275
271   C        -0.105  -0.104  -0.086  -0.003  -0.000   0.030  -0.307  -0.304  -0.275
272   P         1.651   1.654   1.671   1.746   1.751   1.778   1.757   1.761   1.782
273   D        -0.105  -0.104  -0.086  -0.280  -0.278  -0.247  -0.307  -0.304  -0.275
274   E        -0.105  -0.104  -0.086  -0.383  -0.381  -0.350  -0.307  -0.304  -0.275
275   T        -0.105  -0.104  -0.086  -0.327  -0.324  -0.294  -0.307  -0.304  -0.275
276   N         1.651   1.654   1.671   1.557   1.562   1.589   1.757   1.761   1.782
277   D        -0.105  -0.104  -0.086  -0.402  -0.400  -0.369  -0.307  -0.304  -0.275
278   N        -0.105  -0.104  -0.086  -0.262  -0.259  -0.229  -0.307  -0.304  -0.275
279   R        -0.105  -0.104  -0.086  -0.180  -0.177  -0.147  -0.307  -0.304  -0.275
280   G        -0.105  -0.104  -0.086  -0.244  -0.241  -0.210  -0.307  -0.304  -0.275
281   S        -0.105  -0.104  -0.086  -0.346  -0.343  -0.312  -0.307  -0.304  -0.275
282   E        -0.105  -0.104  -0.086  -0.108  -0.105  -0.075  -0.307  -0.304  -0.275
283   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
284   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
285   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
286   H        -0.105  -0.104  -0.086  -0.412  -0.409  -0.379  -0.307  -0.304  -0.275
287   Y        -0.105  -0.104  -0.086  -0.108  -0.105  -0.075  -0.307  -0.304  -0.275
288   T        -0.105  -0.104  -0.086  -0.412  -0.409  -0.379  -0.307  -0.304  -0.275
289   K         0.038   0.006  -0.013   0.028  -0.027  -0.061  -0.077  -0.127  -0.157
290   R         0.038   0.006  -0.013   0.024  -0.031  -0.064  -0.077  -0.127  -0.157
291   K         0.038   0.065   0.009   0.024   0.068  -0.027  -0.077  -0.035  -0.123
292   K         0.038   0.065   0.009   0.024   0.068  -0.027  -0.077  -0.035  -0.123
293   I        -1.133  -1.129  -1.113  -0.960  -0.959  -0.926  -0.995  -0.989  -0.961
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/P38290
Output conservation file - output/P38290
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
