1     M         1.696   1.760   1.829   1.930   2.018   2.133   1.876   1.978   2.105
2     S         1.696   1.760   1.829   1.578   1.660   1.782   1.876   1.978   2.105
3     K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     N        -0.019   0.151   0.041  -0.241  -0.003  -0.125  -0.300  -0.067  -0.195
5     R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
6     D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
8     L         1.696   1.760   1.829   1.543   1.640   1.747   1.876   1.978   2.105
9     L        -0.514  -0.590  -0.525  -0.801  -0.878  -0.778  -0.644  -0.703  -0.615
10    A        -0.194  -0.412  -0.458   0.030  -0.303  -0.375  -0.186  -0.466  -0.525
11    N         0.531   0.661   0.677   0.436   0.658   0.656   0.158   0.386   0.370
12    L         1.033   0.897   0.855   0.965   0.799   0.731   1.074   0.832   0.726
13    N        -0.439  -0.404  -0.490  -0.585  -0.523  -0.686  -0.529  -0.478  -0.570
14    A         0.706   0.616   0.655   0.631   0.401   0.449   0.501   0.293   0.322
15    F         1.696   1.760   1.829   1.925   2.017   2.128   1.876   1.978   2.105
16    K         1.033   0.897   0.855   0.899   0.747   0.691   1.074   0.832   0.726
17    S        -0.019  -0.042  -0.005  -0.246  -0.287  -0.262  -0.300  -0.321  -0.266
18    K         1.033   0.897   0.855   0.845   0.658   0.572   1.074   0.832   0.726
19    V        -0.019  -0.087  -0.008  -0.017  -0.079   0.041  -0.300  -0.369  -0.266
20    K        -0.194  -0.314  -0.426  -0.300  -0.501  -0.657  -0.186  -0.352  -0.485
21    S        -0.194  -0.343  -0.447  -0.145  -0.372  -0.517  -0.186  -0.385  -0.510
22    A        -0.439  -0.374  -0.461  -0.385  -0.287  -0.427  -0.529  -0.429  -0.532
23    P         1.033   0.897   0.855   1.150   0.936   0.870   1.074   0.832   0.726
24    V        -0.934  -0.902  -0.913  -0.960  -0.905  -0.905  -0.873  -0.815  -0.808
25    I        -1.050  -1.085  -0.953  -1.129  -1.180  -0.984  -0.988  -0.994  -0.849
26    A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
27    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
28    A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
29    K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
30    V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
31    G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
32    Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
33    K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
34    K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
35    T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
36    N        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
37    D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
38    T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
39    V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
40    I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
41    T        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
42    I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
43    D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
44    G        -0.934  -0.904  -0.912  -0.874  -0.842  -0.865  -0.873  -0.824  -0.810
45    N        -0.629  -0.569  -0.555  -0.816  -0.779  -0.721  -0.759  -0.703  -0.651
46    T        -0.745  -0.676  -0.823  -0.573  -0.544  -0.737  -0.644  -0.575  -0.712
47    R        -0.194  -0.236  -0.405  -0.029  -0.090  -0.416  -0.186  -0.239  -0.458
48    K        -1.660  -1.639  -1.550  -1.639  -1.557  -1.453  -1.217  -1.184  -1.073
49    R        -1.050  -0.976  -0.937  -1.115  -1.034  -0.949  -0.988  -0.906  -0.835
50    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
51    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
52    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
53    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
54    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
55    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
56    T        -1.032  -0.920  -0.925  -1.104  -0.971  -0.941  -0.967  -0.850  -0.823
57    A        -1.032  -0.851  -0.936  -1.013  -0.743  -0.884  -0.967  -0.777  -0.833
58    S         0.294   0.264   0.108   0.200   0.153  -0.133   0.230   0.177  -0.073
59    E        -1.730  -1.644  -1.577  -1.599  -1.481  -1.382  -1.266  -1.185  -1.091
60    R        -1.381  -1.345  -1.288  -1.212  -1.145  -1.089  -1.116  -1.074  -0.988
61    A        -1.032  -0.968  -0.932  -1.170  -1.119  -1.034  -0.967  -0.890  -0.830
62    Q        -1.032  -0.989  -0.937  -1.040  -0.957  -0.887  -0.967  -0.915  -0.834
63    E        -1.381  -1.280  -1.270  -1.335  -1.217  -1.164  -1.116  -1.019  -0.973
64    N        -0.204  -0.186  -0.090  -0.454  -0.451  -0.306  -0.518  -0.499  -0.375
65    T        -1.032  -1.044  -0.943  -1.040  -1.048  -0.921  -0.967  -0.963  -0.839
66    L        -1.052  -0.938  -0.935  -1.064  -0.879  -0.909  -0.975  -0.851  -0.828
67    N        -0.649  -0.629  -0.588  -0.546  -0.505  -0.445  -0.763  -0.740  -0.681
68    S        -0.161  -0.080  -0.052  -0.444  -0.343  -0.286  -0.470  -0.362  -0.325
69    A         0.023   0.157   0.036  -0.143   0.052  -0.136  -0.177   0.021  -0.185
70    K        -0.649  -0.626  -0.559  -0.893  -0.835  -0.742  -0.763  -0.737  -0.648
71    N         0.815   0.703   0.715   0.874   0.686   0.683   0.703   0.468   0.447
72    P        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
73    V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
74    L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
75    V        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
76    D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
77    I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
78    K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
79    K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
80    E        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
81    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
82    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
83    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
84    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
85    A         0.476   0.547   0.629   0.286   0.382   0.526   0.043   0.152   0.267
86    G        -0.645  -0.630  -0.552  -0.723  -0.737  -0.598  -0.771  -0.750  -0.644
87    S        -1.032  -0.930  -0.929  -0.993  -0.853  -0.852  -0.967  -0.855  -0.827
88    N         0.014  -0.028   0.009  -0.279  -0.314  -0.271  -0.219  -0.262  -0.235
89    S        -0.552  -0.642  -0.540  -0.887  -0.977  -0.834  -0.667  -0.752  -0.629
90    S        -0.335  -0.261  -0.431  -0.270  -0.175  -0.493  -0.368  -0.275  -0.491
91    N        -1.032  -0.985  -0.952  -1.116  -1.104  -1.037  -0.967  -0.911  -0.846
92    A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
93    I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
94    S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
95    L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
96    D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
97    D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
98    D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
99    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
100   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
101   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
102   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
103   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
104   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
105   D        -1.660  -1.645  -1.570  -1.484  -1.498  -1.371  -1.217  -1.187  -1.087
106   E        -0.439  -0.455  -0.465  -0.537  -0.577  -0.567  -0.529  -0.545  -0.544
107   D         0.401   0.318   0.153   0.583   0.475   0.219   0.387   0.262  -0.003
108   F        -1.660  -1.521  -1.547  -1.345  -1.169  -1.187  -1.217  -1.096  -1.071
109   G        -1.240  -1.061  -1.204  -1.117  -0.855  -1.107  -0.988  -0.805  -0.916
110   S        -1.050  -1.033  -0.947  -1.069  -0.995  -0.873  -0.988  -0.947  -0.842
111   S        -1.240  -1.217  -1.244  -1.102  -1.093  -1.082  -0.988  -0.962  -0.951
112   P        -0.745  -0.695  -0.857  -0.542  -0.503  -0.750  -0.644  -0.586  -0.748
113   S        -1.355  -1.378  -1.277  -1.534  -1.562  -1.401  -1.102  -1.100  -0.980
114   K         1.033   0.897   0.855   0.900   0.747   0.694   1.074   0.832   0.726
115   K         0.111   0.088   0.058  -0.119  -0.118  -0.185  -0.071  -0.085  -0.163
116   V        -0.629  -0.597  -0.521  -0.602  -0.525  -0.425  -0.759  -0.695  -0.606
117   R        -0.745  -0.795  -0.870  -0.841  -0.936  -1.034  -0.644  -0.706  -0.762
118   P        -1.050  -1.065  -0.954  -1.135  -1.147  -0.990  -0.988  -0.976  -0.849
119   G        -0.645  -0.626  -0.547  -0.780  -0.776  -0.649  -0.771  -0.734  -0.635
120   S         0.815   0.793   0.746   0.706   0.657   0.579   0.703   0.640   0.510
121   I        -0.649  -0.577  -0.547  -0.871  -0.779  -0.721  -0.763  -0.675  -0.633
122   A         0.511   0.638   0.676   0.339   0.556   0.596   0.117   0.338   0.367
123   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
124   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
125   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
126   L        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
127   Q        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
128   A        -0.085  -0.088  -0.046  -0.139  -0.152  -0.076  -0.364  -0.377  -0.318
129   N        -0.134   0.067  -0.026  -0.287   0.049  -0.145  -0.415  -0.117  -0.280
130   Q        -1.050  -0.956  -0.943  -0.887  -0.769  -0.706  -0.988  -0.881  -0.840
131   T        -0.934  -0.931  -0.916  -0.808  -0.828  -0.789  -0.873  -0.864  -0.815
132   D        -1.355  -1.349  -1.279  -1.250  -1.268  -1.145  -1.102  -1.079  -0.982
133   I        -1.050  -0.969  -0.950  -0.898  -0.779  -0.779  -0.988  -0.889  -0.845
134   S        -0.629  -0.601  -0.557  -0.809  -0.760  -0.680  -0.759  -0.728  -0.653
135   K         0.111   0.301   0.097   0.034   0.358  -0.015  -0.071   0.221  -0.094
136   S        -0.439  -0.570  -0.516  -0.577  -0.794  -0.702  -0.529  -0.675  -0.605
137   H         1.033   0.897   0.855   1.357   1.170   1.103   1.074   0.832   0.726
138   D        -0.934  -1.019  -0.934  -0.944  -1.012  -0.890  -0.873  -0.932  -0.829
139   S        -0.194  -0.412  -0.458  -0.174  -0.503  -0.591  -0.186  -0.466  -0.525
140   S         0.531   0.609   0.653   0.271   0.394   0.437   0.158   0.281   0.318
141   K         0.531   0.661   0.677   0.272   0.528   0.496   0.158   0.386   0.370
142   L         0.401   0.313   0.140   0.412   0.294   0.071   0.387   0.242  -0.024
143   L        -0.514  -0.590  -0.525  -0.483  -0.547  -0.440  -0.644  -0.703  -0.615
144   W        -1.050  -0.969  -0.950  -0.837  -0.681  -0.652  -0.988  -0.889  -0.845
145   A         1.696   1.760   1.829   1.747   1.815   1.951   1.876   1.978   2.105
146   T        -0.019  -0.060  -0.005  -0.092  -0.114  -0.039  -0.300  -0.324  -0.259
147   E         1.033   0.897   0.855   1.154   0.958   0.903   1.074   0.832   0.726
148   Y         1.033   0.897   0.855   1.348   1.177   1.128   1.074   0.832   0.726
149   I         0.706   0.616   0.655   0.696   0.483   0.499   0.501   0.293   0.322
150   Q        -0.019  -0.060  -0.005  -0.300  -0.336  -0.249  -0.300  -0.324  -0.259
151   K        -0.514  -0.523  -0.497  -0.712  -0.707  -0.630  -0.644  -0.644  -0.586
152   K        -0.629  -0.591  -0.543  -0.762  -0.713  -0.614  -0.759  -0.701  -0.635
153   G        -0.514  -0.541  -0.516  -0.489  -0.506  -0.472  -0.644  -0.650  -0.605
154   K        -0.934  -0.767  -0.868  -0.927  -0.639  -0.766  -0.873  -0.677  -0.761
155   P         0.401   0.442   0.182   0.597   0.637   0.279   0.387   0.444   0.041
156   V        -0.439  -0.532  -0.500  -0.393  -0.535  -0.522  -0.529  -0.618  -0.580
157   L        -0.514  -0.351  -0.476  -0.608  -0.386  -0.567  -0.644  -0.468  -0.564
158   V        -0.745  -0.859  -0.885  -0.507  -0.668  -0.739  -0.644  -0.773  -0.777
159   N        -1.240  -1.116  -1.222  -1.134  -0.985  -1.157  -0.988  -0.868  -0.932
160   E        -0.439  -0.341  -0.452  -0.492  -0.303  -0.491  -0.529  -0.388  -0.521
161   L         0.476   0.562   0.639   0.166   0.356   0.458   0.043   0.184   0.290
162   L        -1.355  -1.305  -1.262  -1.242  -1.208  -1.106  -1.102  -1.042  -0.968
163   D        -0.629  -0.597  -0.521  -0.782  -0.716  -0.611  -0.759  -0.695  -0.606
164   Y         1.033   0.897   0.855   1.343   1.169   1.118   1.074   0.832   0.726
165   L         1.696   1.760   1.829   1.543   1.640   1.747   1.876   1.978   2.105
166   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
167   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
168   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
169   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
170   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
171   S         1.696   1.760   1.829   1.578   1.660   1.782   1.876   1.978   2.105
172   M        -1.050  -1.079  -0.958  -0.923  -0.989  -0.821  -0.988  -0.988  -0.852
173   K        -1.050  -1.065  -0.954  -1.222  -1.225  -1.054  -0.988  -0.976  -0.849
174   K        -1.355  -1.372  -1.286  -1.422  -1.421  -1.331  -1.102  -1.097  -0.987
175   D        -0.934  -1.029  -0.948  -0.921  -1.038  -0.930  -0.873  -0.942  -0.842
176   D        -1.240  -1.239  -1.252  -0.954  -0.987  -0.973  -0.988  -0.983  -0.958
177   K        -1.355  -1.390  -1.295  -1.282  -1.257  -1.120  -1.102  -1.107  -0.994
178   V        -0.019  -0.060  -0.005  -0.232  -0.239  -0.159  -0.300  -0.324  -0.259
179   I        -0.209  -0.190  -0.091  -0.457  -0.433  -0.291  -0.529  -0.505  -0.377
180   E        -0.439  -0.431  -0.491  -0.354  -0.379  -0.440  -0.529  -0.531  -0.578
181   L         0.401   0.313   0.140   0.411   0.287   0.069   0.387   0.242  -0.024
182   L         1.033   0.897   0.855   0.984   0.830   0.772   1.074   0.832   0.726
183   K         0.401   0.347   0.156   0.303   0.234  -0.031   0.387   0.287   0.002
184   K        -0.439  -0.440  -0.479  -0.630  -0.613  -0.656  -0.529  -0.515  -0.553
185   L        -0.934  -1.029  -0.948  -0.908  -1.001  -0.873  -0.873  -0.942  -0.842
186   D        -0.745  -0.800  -0.872  -0.496  -0.587  -0.697  -0.644  -0.711  -0.764
187   R        -0.194  -0.310  -0.419   0.002  -0.176  -0.385  -0.186  -0.342  -0.475
188   I        -0.194  -0.092  -0.356   0.165   0.309  -0.048  -0.186  -0.051  -0.394
189   E        -0.934  -1.019  -0.934  -1.074  -1.152  -1.033  -0.873  -0.932  -0.829
190   F        -0.019  -0.102  -0.009   0.172   0.080   0.219  -0.300  -0.394  -0.271
191   D         0.111   0.016   0.037   0.165   0.048   0.049  -0.071  -0.199  -0.193
192   P        -0.019   0.001   0.024  -0.101  -0.082  -0.026  -0.300  -0.262  -0.229
193   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
194   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
195   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
196   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
197   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
198   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
199   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
200   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
201   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
202   K        -1.240  -1.284  -1.268  -1.317  -1.343  -1.330  -0.988  -1.022  -0.971
203   K        -1.240  -1.302  -1.256  -1.307  -1.397  -1.305  -0.988  -1.037  -0.961
204   G        -0.934  -0.892  -0.882  -0.837  -0.762  -0.771  -0.873  -0.814  -0.781
205   T         1.033   1.038   0.887   1.156   1.166   0.964   1.074   1.077   0.788
206   F        -0.019  -0.070  -0.001  -0.050  -0.057   0.010  -0.300  -0.340  -0.256
207   K        -0.934  -0.973  -0.939  -1.052  -1.106  -1.066  -0.873  -0.891  -0.833
208   Y         0.401   0.194   0.110   0.797   0.525   0.411   0.387   0.074  -0.070
209   L        -0.934  -1.019  -0.934  -0.968  -1.067  -0.966  -0.873  -0.932  -0.829
210   S         0.531   0.529   0.616   0.226   0.197   0.352   0.158   0.114   0.241
211   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
212   T        -0.934  -0.951  -0.924  -1.077  -1.093  -1.067  -0.873  -0.869  -0.819
213   Y        -0.514  -0.590  -0.525  -0.238  -0.342  -0.228  -0.644  -0.703  -0.615
214   D        -0.019  -0.060  -0.005  -0.077  -0.091  -0.031  -0.300  -0.324  -0.259
215   V         0.476   0.528   0.616   0.317   0.389   0.526   0.043   0.112   0.241
216   H         0.531   0.661   0.677   0.495   0.691   0.714   0.158   0.386   0.370
217   S         0.401   0.232   0.135   0.417   0.183   0.036   0.387   0.129  -0.032
218   P        -1.050  -0.969  -0.945  -1.291  -1.208  -1.125  -0.988  -0.896  -0.842
219   S        -1.355  -1.267  -1.274  -1.259  -1.146  -1.149  -1.102  -1.016  -0.978
220   E        -0.629  -0.629  -0.557  -0.643  -0.630  -0.521  -0.759  -0.743  -0.650
221   L         1.696   1.760   1.829   1.543   1.640   1.747   1.876   1.978   2.105
222   L         1.033   1.038   0.887   0.984   1.012   0.820   1.074   1.077   0.788
223   K        -1.240  -0.945  -1.196  -1.085  -0.636  -1.051  -0.988  -0.678  -0.909
224   L        -0.209  -0.191  -0.093  -0.318  -0.250  -0.121  -0.529  -0.506  -0.380
225   L         1.696   1.760   1.829   1.543   1.640   1.747   1.876   1.978   2.105
226   R        -0.439  -0.571  -0.504  -0.465  -0.652  -0.609  -0.529  -0.669  -0.591
227   S        -0.194  -0.160  -0.376  -0.196  -0.201  -0.492  -0.186  -0.161  -0.420
228   Q         1.033   0.897   0.855   1.181   0.971   0.880   1.074   0.832   0.726
229   V        -1.050  -1.011  -0.944  -1.101  -1.072  -0.962  -0.988  -0.933  -0.841
230   T         1.033   0.897   0.855   1.151   0.966   0.900   1.074   0.832   0.726
231   F         0.111  -0.011  -0.002   0.341   0.117   0.139  -0.071  -0.267  -0.257
232   K        -0.194  -0.314  -0.426  -0.299  -0.493  -0.654  -0.186  -0.352  -0.485
233   G         1.033   0.897   0.855   1.232   1.063   1.022   1.074   0.832   0.726
234   I        -0.745  -0.871  -0.887  -0.453  -0.656  -0.707  -0.644  -0.784  -0.780
235   S         1.033   0.897   0.855   0.996   0.812   0.757   1.074   0.832   0.726
236   C        -0.439  -0.336  -0.471  -0.203  -0.065  -0.216  -0.529  -0.389  -0.547
237   K         1.033   1.038   0.887   0.875   0.901   0.689   1.074   1.077   0.788
238   D         0.531   0.626   0.667   0.362   0.510   0.561   0.158   0.314   0.347
239   L         1.696   1.760   1.829   1.543   1.640   1.747   1.876   1.978   2.105
240   K         1.033   0.994   0.871   0.875   0.842   0.664   1.074   1.001   0.757
241   D         1.696   1.760   1.829   1.747   1.840   1.951   1.876   1.978   2.105
242   G         1.696   1.760   1.829   1.783   1.863   1.986   1.876   1.978   2.105
243   W         1.696   1.760   1.829   1.971   2.057   2.173   1.876   1.978   2.105
244   P         0.531   0.612   0.664   0.380   0.484   0.575   0.158   0.286   0.343
245   Q        -0.629  -0.629  -0.557  -0.607  -0.605  -0.505  -0.759  -0.743  -0.650
246   C         1.033   0.994   0.871   1.409   1.363   1.177   1.074   1.001   0.757
247   D        -1.355  -1.260  -1.252  -1.298  -1.165  -1.125  -1.102  -1.010  -0.961
248   E        -1.355  -1.334  -1.273  -1.295  -1.321  -1.190  -1.102  -1.068  -0.977
249   T        -0.514  -0.541  -0.516  -0.571  -0.618  -0.576  -0.644  -0.650  -0.605
250   I         1.033   0.994   0.871   1.210   1.159   0.952   1.074   1.001   0.757
251   N        -0.134  -0.092  -0.056  -0.217  -0.156  -0.126  -0.415  -0.365  -0.325
252   Q         0.401   0.643   0.207   0.586   0.889   0.315   0.387   0.736   0.080
253   L         1.696   1.760   1.829   1.543   1.640   1.747   1.876   1.978   2.105
254   E         1.696   1.760   1.829   1.740   1.820   1.944   1.876   1.978   2.105
255   E        -0.934  -0.946  -0.916  -0.957  -1.013  -0.971  -0.873  -0.876  -0.816
256   D        -0.934  -0.862  -0.909  -0.920  -0.836  -0.936  -0.873  -0.800  -0.809
257   S        -0.514  -0.533  -0.505  -0.562  -0.535  -0.489  -0.644  -0.646  -0.594
258   K        -0.745  -0.709  -0.837  -0.784  -0.732  -0.902  -0.644  -0.601  -0.726
259   I         0.111   0.104   0.046   0.178   0.163   0.029  -0.071  -0.082  -0.183
260   L         1.033   1.038   0.887   0.968   0.994   0.787   1.074   1.077   0.788
261   V         1.033   0.994   0.871   1.138   1.086   0.882   1.074   1.001   0.757
262   L         1.033   0.897   0.855   0.968   0.804   0.737   1.074   0.832   0.726
263   R         1.696   1.760   1.829   1.776   1.862   1.980   1.876   1.978   2.105
264   T         0.111   0.079   0.060   0.143   0.113   0.064  -0.071  -0.099  -0.151
265   K         1.033   0.994   0.871   0.875   0.842   0.664   1.074   1.001   0.757
266   K         1.696   1.760   1.829   1.458   1.556   1.662   1.876   1.978   2.105
267   D         0.476   0.533   0.618   0.251   0.329   0.463   0.043   0.122   0.244
268   K        -0.134  -0.094  -0.048  -0.320  -0.241  -0.214  -0.415  -0.377  -0.317
269   T        -0.514  -0.453  -0.483  -0.650  -0.578  -0.589  -0.644  -0.558  -0.569
270   P         1.696   1.760   1.829   1.760   1.833   1.964   1.876   1.978   2.105
271   R         1.033   0.994   0.871   1.149   1.093   0.880   1.074   1.001   0.757
272   Y        -0.629  -0.553  -0.545  -0.522  -0.384  -0.365  -0.759  -0.669  -0.637
273   V         1.033   1.038   0.887   1.193   1.210   1.022   1.074   1.077   0.788
274   W         1.696   1.760   1.829   1.971   2.057   2.173   1.876   1.978   2.105
275   Y        -0.514  -0.612  -0.535  -0.451  -0.627  -0.500  -0.644  -0.725  -0.627
276   N         1.033   0.897   0.855   1.189   1.019   0.937   1.074   0.832   0.726
277   S        -1.660  -1.464  -1.536  -1.412  -1.083  -1.238  -1.217  -1.039  -1.063
278   G        -0.194  -0.343  -0.447   0.001  -0.260  -0.445  -0.186  -0.385  -0.510
279   G         0.706   0.616   0.655   0.666   0.446   0.481   0.501   0.293   0.322
280   N        -1.050  -1.079  -0.958  -0.985  -1.028  -0.838  -0.988  -0.988  -0.852
281   L        -1.240  -1.302  -1.256  -1.119  -1.157  -1.100  -0.988  -1.037  -0.961
282   K        -1.240  -1.213  -1.258  -0.924  -0.848  -0.958  -0.988  -0.962  -0.963
283   C        -1.660  -1.645  -1.570  -1.129  -1.124  -1.031  -1.217  -1.187  -1.087
284   I         0.531   0.529   0.616   0.440   0.392   0.527   0.158   0.114   0.241
285   D         1.696   1.760   1.829   1.747   1.840   1.951   1.876   1.978   2.105
286   E        -1.240  -1.284  -1.268  -1.101  -1.221  -1.196  -0.988  -1.022  -0.971
287   E         1.696   1.760   1.829   1.740   1.820   1.944   1.876   1.978   2.105
288   F         1.033   0.897   0.855   1.310   1.115   1.020   1.074   0.832   0.726
289   V        -0.934  -0.946  -0.927  -0.897  -0.955  -0.883  -0.873  -0.876  -0.825
290   K        -1.355  -1.390  -1.295  -1.455  -1.460  -1.343  -1.102  -1.107  -0.994
291   M         0.706   0.754   0.695   0.862   0.928   0.790   0.501   0.566   0.407
292   W         1.696   1.760   1.829   1.971   2.057   2.173   1.876   1.978   2.105
293   E        -0.934  -0.988  -0.937  -0.869  -0.938  -0.854  -0.873  -0.913  -0.834
294   N        -0.934  -1.007  -0.929  -0.865  -1.020  -0.891  -0.873  -0.928  -0.826
295   V         0.111   0.128   0.036   0.222   0.220   0.131  -0.071  -0.076  -0.197
296   Q        -0.439  -0.515  -0.489  -0.611  -0.705  -0.659  -0.529  -0.596  -0.566
297   L         0.111  -0.011  -0.002  -0.037  -0.216  -0.194  -0.071  -0.267  -0.257
298   P         1.696   1.760   1.829   1.760   1.833   1.964   1.876   1.978   2.105
299   Q        -0.934  -1.029  -0.948  -0.784  -0.923  -0.805  -0.873  -0.942  -0.842
300   F        -1.050  -0.969  -0.950  -0.908  -0.813  -0.771  -0.988  -0.889  -0.845
301   A        -0.934  -0.832  -0.906  -0.996  -0.866  -0.983  -0.873  -0.767  -0.806
302   E        -0.745  -0.787  -0.882  -0.570  -0.659  -0.824  -0.644  -0.698  -0.774
303   L         1.033   0.897   0.855   0.968   0.804   0.737   1.074   0.832   0.726
304   P        -0.439  -0.532  -0.500  -0.293  -0.444  -0.383  -0.529  -0.618  -0.580
305   R        -0.209  -0.178  -0.086  -0.391  -0.368  -0.233  -0.529  -0.488  -0.369
306   K        -0.194  -0.314  -0.426  -0.265  -0.437  -0.594  -0.186  -0.352  -0.485
307   L         1.696   1.760   1.829   1.543   1.640   1.747   1.876   1.978   2.105
308   Q        -1.240  -1.284  -1.268  -1.080  -1.218  -1.205  -0.988  -1.022  -0.971
309   D        -0.439  -0.571  -0.504  -0.444  -0.663  -0.592  -0.529  -0.669  -0.591
310   L        -0.629  -0.629  -0.557  -0.760  -0.733  -0.605  -0.759  -0.743  -0.650
311   G         1.033   0.897   0.855   1.172   0.966   0.892   1.074   0.832   0.726
312   L         1.033   0.897   0.855   0.965   0.799   0.731   1.074   0.832   0.726
313   K         1.696   1.760   1.829   1.458   1.556   1.662   1.876   1.978   2.105
314   P         1.696   1.760   1.829   1.760   1.833   1.964   1.876   1.978   2.105
315   A         0.476   0.528   0.616   0.249   0.303   0.459   0.043   0.112   0.241
316   S         0.706   0.854   0.777   0.533   0.748   0.630   0.501   0.754   0.573
317   V        -0.439  -0.399  -0.455  -0.355  -0.306  -0.366  -0.529  -0.471  -0.524
318   D         1.696   1.760   1.829   1.747   1.840   1.951   1.876   1.978   2.105
319   P         1.696   1.760   1.829   1.760   1.833   1.964   1.876   1.978   2.105
320   A        -0.934  -0.906  -0.905  -0.902  -0.893  -0.859  -0.873  -0.842  -0.804
321   T        -0.194  -0.160  -0.376  -0.063  -0.025  -0.390  -0.186  -0.161  -0.420
322   I         0.643   0.652   0.651   0.652   0.649   0.608   0.380   0.366   0.315
323   K         1.696   1.760   1.829   1.458   1.556   1.662   1.876   1.978   2.105
324   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
325   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
326   R        -0.934  -0.973  -0.939  -1.060  -1.106  -1.028  -0.873  -0.891  -0.833
327   Q        -0.439  -0.471  -0.502  -0.342  -0.421  -0.470  -0.529  -0.585  -0.590
328   T        -0.209  -0.178  -0.086  -0.361  -0.319  -0.179  -0.529  -0.488  -0.369
329   K        -0.629  -0.606  -0.552  -0.771  -0.754  -0.688  -0.759  -0.720  -0.646
330   R        -0.934  -1.029  -0.948  -0.781  -0.923  -0.803  -0.873  -0.942  -0.842
331   V        -1.355  -1.378  -1.277  -1.372  -1.393  -1.244  -1.102  -1.100  -0.980
332   E         0.111   0.009  -0.002  -0.008  -0.263  -0.303  -0.071  -0.247  -0.256
333   V        -0.019   0.008   0.010  -0.329  -0.265  -0.253  -0.300  -0.234  -0.237
334   K         1.696   1.760   1.829   1.458   1.556   1.662   1.876   1.978   2.105
335   K        -0.019  -0.087  -0.008  -0.300  -0.368  -0.250  -0.300  -0.369  -0.266
336   K        -0.194  -0.343  -0.447  -0.261  -0.478  -0.615  -0.186  -0.385  -0.510
337   R        -0.019  -0.060  -0.005  -0.314  -0.342  -0.257  -0.300  -0.324  -0.259
338   Q        -1.660  -1.630  -1.569  -1.456  -1.435  -1.336  -1.217  -1.178  -1.086
339   R         1.696   1.760   1.829   1.776   1.862   1.980   1.876   1.978   2.105
340   K         0.111   0.073   0.057   0.058   0.032  -0.064  -0.071  -0.109  -0.160
341   G         1.033   1.038   0.887   1.172   1.175   0.949   1.074   1.077   0.788
342   K         1.696   1.760   1.829   1.458   1.556   1.662   1.876   1.978   2.105
343   I         0.111   0.060   0.042   0.215   0.148   0.087  -0.071  -0.129  -0.186
344   T         1.696   1.760   1.829   1.738   1.821   1.942   1.876   1.978   2.105
345   N         1.696   1.760   1.829   1.776   1.876   1.980   1.876   1.978   2.105
346   T         1.696   1.760   1.829   1.738   1.821   1.942   1.876   1.978   2.105
347   H         1.696   1.760   1.829   1.941   2.021   2.143   1.876   1.978   2.105
348   M         0.706   0.681   0.690   0.799   0.722   0.681   0.501   0.425   0.397
349   T        -1.355  -1.370  -1.283  -1.410  -1.402  -1.264  -1.102  -1.095  -0.985
350   G         0.974   0.819   0.801   1.152   0.936   0.921   0.978   0.690   0.620
351   I         0.401   0.232   0.135   0.628   0.370   0.196   0.387   0.129  -0.032
352   L         1.696   1.760   1.829   1.543   1.640   1.747   1.876   1.978   2.105
353   K         0.706   0.726   0.685   0.414   0.444   0.360   0.501   0.513   0.385
354   D         1.696   1.760   1.829   1.747   1.840   1.951   1.876   1.978   2.105
355   Y         1.696   1.760   1.829   1.904   1.987   2.107   1.876   1.978   2.105
356   S         1.033   1.038   0.887   0.996   1.006   0.809   1.074   1.077   0.788
357   H        -1.660  -1.560  -1.535  -1.317  -1.176  -1.155  -1.217  -1.122  -1.062
358   R        -0.684  -0.557  -0.564  -0.834  -0.562  -0.643  -0.817  -0.670  -0.657
359   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
360   V        -0.335  -0.444  -0.484  -0.158  -0.361  -0.408  -0.368  -0.520  -0.557
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/P36145
Output conservation file - output/P36145
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
