1     M         1.355   1.391   1.457   1.463   1.510   1.623   1.462   1.512   1.619
2     T        -1.833  -1.811  -1.720  -1.687  -1.635  -1.529  -1.391  -1.356  -1.222
3     V        -1.492  -1.358  -1.384  -1.522  -1.317  -1.364  -1.257  -1.111  -1.095
4     -        -1.174  -1.132  -1.018  -1.194  -1.145  -0.963  -1.160  -1.102  -0.951
5     G        -0.569  -0.527  -0.476  -0.622  -0.545  -0.494  -0.775  -0.706  -0.629
6     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
7     T        -0.569  -0.527  -0.476  -0.754  -0.656  -0.592  -0.775  -0.706  -0.629
8     L         0.127   0.126   0.221  -0.244  -0.260  -0.111  -0.216  -0.232  -0.093
9     P         0.127   0.235   0.268  -0.018   0.167   0.205  -0.216  -0.027  -0.003
10    I        -0.569  -0.547  -0.470  -0.759  -0.754  -0.624  -0.775  -0.731  -0.621
11    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
12    W        -1.070  -1.001  -0.985  -1.099  -1.007  -0.997  -1.062  -0.976  -0.920
13    S        -1.492  -1.483  -1.408  -1.593  -1.576  -1.483  -1.257  -1.232  -1.116
14    K        -1.492  -1.483  -1.408  -1.474  -1.466  -1.342  -1.257  -1.232  -1.116
15    T        -0.911  -0.934  -0.968  -0.858  -0.894  -0.956  -0.868  -0.892  -0.900
16    F        -1.070  -1.096  -1.001  -1.242  -1.281  -1.115  -1.062  -1.070  -0.935
17    S         0.533   0.588   0.351   0.499   0.578   0.212   0.491   0.574   0.152
18    Y        -0.974  -1.059  -0.983  -0.768  -0.892  -0.801  -0.963  -1.026  -0.917
19    A        -0.613  -0.556  -0.481  -0.822  -0.741  -0.613  -0.821  -0.739  -0.636
20    I        -0.613  -0.512  -0.466  -0.953  -0.784  -0.722  -0.821  -0.678  -0.615
21    R        -0.388  -0.348  -0.427  -0.297  -0.255  -0.341  -0.535  -0.503  -0.570
22    S        -0.974  -0.984  -0.967  -0.989  -1.023  -0.994  -0.963  -0.958  -0.901
23    L        -0.974  -0.984  -0.967  -1.105  -1.104  -1.083  -0.963  -0.958  -0.901
24    C         0.607   0.462   0.374   0.883   0.689   0.536   0.606   0.370   0.192
25    F        -0.974  -0.913  -0.955  -0.968  -0.848  -0.939  -0.963  -0.874  -0.888
26    L        -1.111  -1.131  -0.998  -1.293  -1.342  -1.128  -1.106  -1.101  -0.933
27    H         1.355   1.391   1.457   1.439   1.490   1.599   1.462   1.512   1.619
28    I        -1.472  -1.504  -1.400  -1.477  -1.466  -1.323  -1.249  -1.253  -1.110
29    I        -0.974  -0.860  -0.947  -1.036  -0.878  -0.992  -0.963  -0.838  -0.882
30    H         0.607   0.549   0.378   0.778   0.707   0.440   0.606   0.513   0.200
31    M        -0.613  -0.565  -0.495  -0.670  -0.575  -0.493  -0.821  -0.752  -0.654
32    Y        -0.388  -0.309  -0.424  -0.255  -0.142  -0.315  -0.535  -0.438  -0.565
33    A        -1.472  -1.511  -1.400  -1.468  -1.556  -1.366  -1.249  -1.258  -1.110
34    Y         0.264   0.177   0.238   0.323   0.167   0.238   0.035  -0.134  -0.059
35    E         0.607   0.462   0.374   0.792   0.624   0.488   0.606   0.370   0.192
36    F        -0.097  -0.299  -0.387   0.076  -0.238  -0.414  -0.107  -0.382  -0.506
37    T        -0.097  -0.299  -0.387   0.047  -0.214  -0.366  -0.107  -0.382  -0.506
38    E        -0.097  -0.299  -0.387   0.106  -0.168  -0.348  -0.107  -0.382  -0.506
39    T         1.355   1.391   1.457   1.335   1.400   1.498   1.462   1.512   1.619
40    R        -0.097  -0.299  -0.387   0.075  -0.217  -0.363  -0.107  -0.382  -0.506
41    G         1.355   1.391   1.457   1.272   1.324   1.437   1.462   1.512   1.619
42    E         0.264   0.177   0.238   0.257   0.101   0.173   0.035  -0.134  -0.059
43    S         1.355   1.391   1.457   1.276   1.323   1.441   1.462   1.512   1.619
44    M         1.355   1.391   1.457   1.463   1.510   1.623   1.462   1.512   1.619
45    L        -0.097  -0.299  -0.387  -0.069  -0.345  -0.495  -0.107  -0.382  -0.506
46    P         1.355   1.391   1.457   1.393   1.440   1.555   1.462   1.512   1.619
47    T         1.355   1.391   1.457   1.335   1.400   1.498   1.462   1.512   1.619
48    L         1.355   1.391   1.457   1.242   1.303   1.408   1.462   1.512   1.619
49    S        -1.111  -1.102  -0.993  -1.063  -1.049  -0.894  -1.106  -1.073  -0.928
50    A        -1.336  -1.369  -1.357  -1.097  -1.181  -1.151  -1.106  -1.131  -1.072
51    T        -1.833  -1.802  -1.727  -1.627  -1.608  -1.471  -1.391  -1.349  -1.227
52    N        -1.111  -1.028  -0.996  -1.129  -1.025  -0.960  -1.106  -1.005  -0.931
53    D         0.607   0.462   0.374   0.669   0.483   0.343   0.606   0.370   0.192
54    Y         0.109   0.122   0.220   0.040   0.051   0.197  -0.250  -0.239  -0.094
55    V         1.355   1.391   1.457   1.259   1.298   1.424   1.462   1.512   1.619
56    H        -0.097  -0.299  -0.387   0.112  -0.186  -0.355  -0.107  -0.382  -0.506
57    V        -0.974  -1.059  -0.983  -1.068  -1.220  -1.095  -0.963  -1.026  -0.917
58    L         0.109   0.122   0.220  -0.220  -0.195  -0.042  -0.250  -0.239  -0.094
59    K         1.355   1.391   1.457   1.364   1.420   1.527   1.462   1.512   1.619
60    N        -1.472  -1.350  -1.386  -1.377  -1.215  -1.221  -1.249  -1.119  -1.098
61    F        -0.974  -0.997  -0.962  -0.791  -0.824  -0.774  -0.963  -0.976  -0.898
62    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
63    Q        -0.974  -0.941  -0.950  -0.896  -0.840  -0.841  -0.963  -0.903  -0.884
64    N        -1.833  -1.802  -1.727  -1.586  -1.526  -1.446  -1.391  -1.349  -1.227
65    G         0.607   0.462   0.374   0.617   0.422   0.292   0.606   0.370   0.192
66    R         0.607   0.693   0.396   0.718   0.834   0.413   0.606   0.734   0.233
67    G        -1.111  -1.128  -0.993  -1.227  -1.255  -1.050  -1.106  -1.097  -0.929
68    I        -0.974  -1.029  -0.973  -1.082  -1.134  -1.049  -0.963  -1.007  -0.909
69    K        -1.833  -1.809  -1.728  -1.603  -1.573  -1.453  -1.391  -1.354  -1.228
70    M        -0.974  -0.901  -0.965  -0.978  -0.929  -1.008  -0.963  -0.891  -0.900
71    G         1.355   1.391   1.457   1.272   1.324   1.437   1.462   1.512   1.619
72    D         1.355   1.391   1.457   1.323   1.376   1.486   1.462   1.512   1.619
73    C         0.264   0.177   0.238   0.320   0.123   0.190   0.035  -0.134  -0.059
74    I         0.264   0.177   0.238   0.051  -0.139  -0.039   0.035  -0.134  -0.059
75    V         1.355   1.391   1.457   1.259   1.298   1.424   1.462   1.512   1.619
76    A         0.607   0.462   0.374   0.732   0.514   0.367   0.606   0.370   0.192
77    L        -1.336  -1.313  -1.362  -1.270  -1.254  -1.317  -1.106  -1.076  -1.076
78    K         1.355   1.391   1.457   1.364   1.420   1.527   1.462   1.512   1.619
79    P         1.355   1.391   1.457   1.393   1.440   1.555   1.462   1.512   1.619
80    T         0.109   0.133   0.224  -0.171  -0.134   0.000  -0.250  -0.219  -0.087
81    D         0.607   0.549   0.378   0.655   0.587   0.316   0.606   0.513   0.200
82    P         0.264   0.177   0.238   0.186  -0.002   0.081   0.035  -0.134  -0.059
83    N        -2.194  -2.132  -2.017  -1.869  -1.781  -1.621  -1.534  -1.468  -1.319
84    H        -0.388  -0.386  -0.443  -0.265  -0.281  -0.354  -0.535  -0.562  -0.590
85    R         0.607   0.462   0.374   0.730   0.539   0.403   0.606   0.370   0.192
86    I         0.264   0.354   0.276   0.051   0.186   0.036   0.035   0.187   0.012
87    C         1.355   1.391   1.457   1.540   1.596   1.698   1.462   1.512   1.619
88    K         1.355   1.391   1.457   1.364   1.420   1.527   1.462   1.512   1.619
89    R         1.355   1.391   1.457   1.381   1.432   1.543   1.462   1.512   1.619
90    V         0.607   0.674   0.394   0.578   0.661   0.258   0.606   0.705   0.230
91    T        -0.388  -0.502  -0.450  -0.494  -0.673  -0.621  -0.535  -0.670  -0.598
92    G         1.355   1.391   1.457   1.272   1.324   1.437   1.462   1.512   1.619
93    M         1.355   1.391   1.457   1.463   1.510   1.623   1.462   1.512   1.619
94    P         0.607   0.712   0.392   0.740   0.874   0.438   0.606   0.762   0.225
95    G         1.355   1.391   1.457   1.272   1.324   1.437   1.462   1.512   1.619
96    D         1.355   1.391   1.457   1.323   1.376   1.486   1.462   1.512   1.619
97    L        -0.974  -1.002  -0.973  -1.083  -1.127  -1.052  -0.963  -0.982  -0.909
98    V         0.607   0.674   0.394   0.578   0.661   0.258   0.606   0.705   0.230
99    L         0.607   0.462   0.374   0.599   0.426   0.292   0.606   0.370   0.192
100   V         0.607   0.549   0.378   0.578   0.489   0.228   0.606   0.513   0.200
101   D         1.355   1.391   1.457   1.323   1.376   1.486   1.462   1.512   1.619
102   P         0.607   0.549   0.378   0.742   0.669   0.421   0.606   0.513   0.200
103   S        -0.749  -0.876  -0.941  -0.672  -0.858  -0.972  -0.678  -0.824  -0.870
104   T        -1.336  -1.264  -1.361  -1.202  -1.109  -1.232  -1.106  -1.021  -1.075
105   I        -0.749  -0.594  -0.900  -0.668  -0.450  -0.901  -0.678  -0.483  -0.825
106   V        -1.070  -1.020  -0.990  -1.210  -1.126  -1.078  -1.062  -0.993  -0.924
107   N        -0.541  -0.551  -0.494  -0.610  -0.635  -0.565  -0.723  -0.731  -0.652
108   Y         0.329   0.338   0.279   0.189   0.204   0.111   0.151   0.158   0.018
109   V         0.091   0.126   0.222  -0.216  -0.167  -0.007  -0.286  -0.231  -0.091
110   G         0.329   0.338   0.279   0.271   0.278   0.140   0.151   0.158   0.018
111   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
112   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
113   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
114   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
115   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
116   D        -1.174  -1.142  -1.018  -1.190  -1.143  -0.960  -1.160  -1.111  -0.951
117   V        -0.541  -0.551  -0.494  -0.596  -0.617  -0.547  -0.723  -0.731  -0.652
118   L        -1.174  -1.142  -1.018  -1.198  -1.148  -0.967  -1.160  -1.111  -0.951
119   V        -0.541  -0.551  -0.494  -0.731  -0.757  -0.674  -0.723  -0.731  -0.652
120   D        -0.378  -0.311  -0.458  -0.352  -0.253  -0.474  -0.495  -0.397  -0.604
121   E        -0.569  -0.548  -0.490  -0.620  -0.585  -0.502  -0.775  -0.738  -0.648
122   E         0.127   0.173   0.232  -0.066   0.010   0.085  -0.216  -0.142  -0.070
123   R        -1.075  -1.069  -1.009  -1.092  -1.079  -0.976  -1.055  -1.034  -0.942
124   F         0.127   0.163   0.231   0.065   0.119   0.216  -0.216  -0.161  -0.072
125   G        -0.749  -0.594  -0.900  -0.527  -0.296  -0.776  -0.678  -0.483  -0.825
126   T        -0.477  -0.496  -0.457  -0.578  -0.570  -0.512  -0.678  -0.680  -0.608
127   Y        -0.388  -0.497  -0.443  -0.272  -0.425  -0.372  -0.535  -0.663  -0.590
128   I         1.355   1.391   1.457   1.259   1.302   1.424   1.462   1.512   1.619
129   K        -0.974  -1.069  -0.965  -0.880  -0.991  -0.843  -0.963  -1.037  -0.901
130   V         0.264   0.235   0.251   0.051  -0.028  -0.014   0.035  -0.027  -0.035
131   P         1.355   1.391   1.457   1.393   1.440   1.555   1.462   1.512   1.619
132   E        -0.477  -0.544  -0.452  -0.558  -0.640  -0.519  -0.678  -0.733  -0.603
133   G         1.355   1.391   1.457   1.272   1.324   1.437   1.462   1.512   1.619
134   H         1.355   1.391   1.457   1.439   1.490   1.599   1.462   1.512   1.619
135   V         0.607   0.549   0.378   0.627   0.552   0.338   0.606   0.513   0.200
136   W         1.355   1.391   1.457   1.540   1.596   1.698   1.462   1.512   1.619
137   V        -0.749  -0.735  -0.919  -0.647  -0.673  -0.884  -0.678  -0.666  -0.847
138   T         0.607   0.462   0.374   0.680   0.498   0.350   0.606   0.370   0.192
139   G         1.355   1.391   1.457   1.272   1.324   1.437   1.462   1.512   1.619
140   D         1.355   1.391   1.457   1.323   1.376   1.486   1.462   1.512   1.619
141   N         1.355   1.391   1.457   1.414   1.473   1.575   1.462   1.512   1.619
142   L         0.607   0.462   0.374   0.561   0.364   0.205   0.606   0.370   0.192
143   S        -0.388  -0.430  -0.425  -0.391  -0.444  -0.420  -0.535  -0.564  -0.561
144   H         0.607   0.549   0.378   0.791   0.723   0.471   0.606   0.513   0.200
145   S         1.355   1.391   1.457   1.276   1.323   1.441   1.462   1.512   1.619
146   L         1.355   1.391   1.457   1.242   1.303   1.408   1.462   1.512   1.619
147   D         1.355   1.391   1.457   1.323   1.376   1.486   1.462   1.512   1.619
148   S         1.355   1.391   1.457   1.276   1.323   1.441   1.462   1.512   1.619
149   R         1.355   1.391   1.457   1.381   1.432   1.543   1.462   1.512   1.619
150   T        -0.388  -0.430  -0.425  -0.458  -0.476  -0.505  -0.535  -0.564  -0.561
151   Y         1.355   1.391   1.457   1.480   1.541   1.639   1.462   1.512   1.619
152   N        -0.974  -0.971  -0.973  -0.970  -0.980  -0.988  -0.963  -0.954  -0.908
153   A        -0.749  -0.741  -0.908  -0.566  -0.577  -0.849  -0.678  -0.672  -0.834
154   L        -0.974  -0.976  -0.958  -1.105  -1.112  -1.064  -0.963  -0.958  -0.894
155   P         1.355   1.391   1.457   1.393   1.440   1.555   1.462   1.512   1.619
156   M        -0.097  -0.084  -0.360   0.126   0.136  -0.305  -0.107  -0.091  -0.469
157   G         0.264   0.285   0.253   0.122   0.147   0.088   0.035   0.063  -0.031
158   L         1.355   1.391   1.457   1.242   1.303   1.408   1.462   1.512   1.619
159   I         0.607   0.549   0.378   0.578   0.493   0.228   0.606   0.513   0.200
160   M        -0.097   0.033  -0.328   0.067   0.249  -0.266  -0.107   0.074  -0.425
161   G         0.607   0.462   0.374   0.617   0.422   0.292   0.606   0.370   0.192
162   K         1.355   1.391   1.457   1.364   1.420   1.527   1.462   1.512   1.619
163   I         0.607   0.462   0.374   0.578   0.362   0.221   0.606   0.370   0.192
164   V         0.109   0.122   0.220  -0.246  -0.254  -0.078  -0.250  -0.239  -0.094
165   A         1.355   1.391   1.457   1.410   1.450   1.571   1.462   1.512   1.619
166   A         1.355   1.391   1.457   1.424   1.465   1.584   1.462   1.512   1.619
167   N         0.533   0.394   0.332   0.657   0.472   0.355   0.491   0.255   0.116
168   N        -0.490  -0.428  -0.459  -0.660  -0.559  -0.598  -0.674  -0.581  -0.609
169   F         0.194   0.276   0.268   0.175   0.301   0.278  -0.091   0.048  -0.002
170   D        -1.070  -1.091  -0.987  -1.145  -1.161  -0.998  -1.062  -1.065  -0.922
171   K        -0.649  -0.610  -0.502  -0.793  -0.732  -0.568  -0.868  -0.810  -0.663
172   P         0.127   0.173   0.232  -0.076   0.003   0.071  -0.216  -0.142  -0.070
173   F        -0.569  -0.525  -0.482  -0.752  -0.682  -0.627  -0.775  -0.713  -0.639
174   W        -0.569  -0.531  -0.484  -0.639  -0.574  -0.515  -0.775  -0.720  -0.641
175   D        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
176   G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
177   S        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
178   I        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
179   R        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
180   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
181   N        -1.492  -1.480  -1.396  -1.340  -1.309  -1.191  -1.257  -1.231  -1.106
182   I        -1.070  -1.072  -0.991  -1.166  -1.200  -1.061  -1.062  -1.051  -0.926
183   W         0.533   0.657   0.365   0.788   0.956   0.535   0.491   0.680   0.177
184   G        -0.388  -0.430  -0.425  -0.457  -0.497  -0.495  -0.535  -0.564  -0.561
185   F         0.607   0.462   0.374   0.775   0.584   0.444   0.606   0.370   0.192
186   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
187   K        -0.097  -0.195  -0.363   0.084  -0.052  -0.306  -0.107  -0.247  -0.473
188   W        -0.749  -0.693  -0.911  -0.377  -0.291  -0.644  -0.678  -0.606  -0.837
189   I        -0.097  -0.299  -0.387  -0.056  -0.345  -0.487  -0.107  -0.382  -0.506
190   N        -1.472  -1.450  -1.383  -1.422  -1.392  -1.294  -1.249  -1.211  -1.097
191   N         1.355   1.391   1.457   1.414   1.473   1.575   1.462   1.512   1.619
192   T        -0.388  -0.432  -0.426  -0.494  -0.538  -0.574  -0.535  -0.568  -0.565
193   F        -0.613  -0.515  -0.480  -0.751  -0.599  -0.545  -0.821  -0.681  -0.634
194   L        -1.833  -1.758  -1.716  -1.558  -1.439  -1.399  -1.391  -1.314  -1.219
195   D         0.607   0.719   0.398   0.655   0.806   0.350   0.606   0.773   0.235
196   V        -1.174  -1.142  -1.018  -1.352  -1.312  -1.117  -1.160  -1.111  -0.951
197   Q        -1.174  -1.142  -1.018  -1.183  -1.137  -0.952  -1.160  -1.111  -0.951
198   A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
199   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
200   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
201   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
202   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
203   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
204   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
205   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
206   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
207   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
208   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
209   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
210   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
211   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
212   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
213   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
214   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
215   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
216   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
217   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
218   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
219   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
220   S        -0.649  -0.616  -0.503  -0.892  -0.853  -0.672  -0.868  -0.818  -0.664
221   N        -1.833  -1.739  -1.712  -1.657  -1.495  -1.501  -1.391  -1.294  -1.216
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/P28627
Output conservation file - output/P28627
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
