1     M         1.350   1.373   1.467   1.558   1.586   1.728   1.455   1.489   1.638
2     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
3     -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
4     N         0.647   0.526   0.420   0.942   0.790   0.601   0.659   0.471   0.252
5     P        -0.655  -0.702  -0.861  -0.592  -0.663  -0.865  -0.591  -0.649  -0.817
6     F         1.350   1.373   1.467   1.279   1.316   1.466   1.455   1.489   1.638
7     R         0.647   0.526   0.420   0.896   0.734   0.556   0.659   0.471   0.252
8     I        -1.563  -1.586  -1.370  -1.947  -1.980  -1.627  -1.387  -1.393  -1.121
9     L        -0.470  -0.433  -0.408  -0.793  -0.788  -0.706  -0.705  -0.670  -0.583
10    G         0.300   0.323   0.294   0.375   0.407   0.314   0.091   0.126   0.017
11    D         1.350   1.373   1.467   1.549   1.583   1.720   1.455   1.489   1.638
12    L        -0.592  -0.622  -0.474  -0.993  -1.013  -0.751  -0.819  -0.861  -0.661
13    S        -0.331  -0.399  -0.402  -0.315  -0.436  -0.436  -0.477  -0.587  -0.569
14    H         1.350   1.373   1.467   1.587   1.619   1.756   1.455   1.489   1.638
15    L        -0.024  -0.055  -0.302  -0.276  -0.323  -0.673  -0.023  -0.062  -0.419
16    T         0.647   0.702   0.438   0.790   0.856   0.494   0.659   0.743   0.284
17    S         0.647   0.526   0.420   0.738   0.589   0.427   0.659   0.471   0.252
18    I         1.350   1.373   1.467   1.171   1.209   1.365   1.455   1.489   1.638
19    L        -0.470  -0.427  -0.412  -0.927  -0.851  -0.840  -0.705  -0.649  -0.587
20    I         0.647   0.526   0.420   0.506   0.335   0.123   0.659   0.471   0.252
21    L         1.350   1.373   1.467   0.969   0.991   1.175   1.455   1.489   1.638
22    I        -0.470  -0.408  -0.411  -0.978  -0.923  -0.852  -0.705  -0.644  -0.587
23    H        -0.592  -0.515  -0.436  -0.478  -0.338  -0.280  -0.819  -0.709  -0.609
24    N        -1.887  -1.881  -1.688  -1.611  -1.595  -1.318  -1.501  -1.487  -1.236
25    I         0.300   0.245   0.288   0.142   0.064   0.141   0.091  -0.014   0.005
26    K        -1.117  -1.090  -0.952  -0.990  -0.943  -0.749  -1.160  -1.115  -0.922
27    T        -0.916  -0.884  -0.910  -0.875  -0.841  -0.901  -0.932  -0.913  -0.880
28    T        -1.887  -1.837  -1.684  -1.687  -1.635  -1.400  -1.501  -1.454  -1.233
29    R        -0.916  -0.850  -0.905  -0.697  -0.600  -0.676  -0.932  -0.844  -0.872
30    Y        -0.024  -0.102  -0.305   0.115   0.011  -0.318  -0.023  -0.134  -0.424
31    I        -1.117  -1.112  -0.967  -1.148  -1.113  -0.896  -1.160  -1.153  -0.938
32    E        -1.765  -1.627  -1.649  -1.348  -1.167  -1.177  -1.387  -1.253  -1.204
33    G         1.350   1.373   1.467   1.468   1.501   1.645   1.455   1.489   1.638
34    I         0.055   0.073   0.234  -0.628  -0.612  -0.326  -0.364  -0.338  -0.099
35    S         1.350   1.373   1.467   1.341   1.376   1.524   1.455   1.489   1.638
36    F        -0.331  -0.296  -0.380  -0.764  -0.713  -0.838  -0.477  -0.420  -0.538
37    K         1.350   1.373   1.467   1.414   1.449   1.593   1.455   1.489   1.638
38    T         0.300   0.245   0.288   0.248   0.147   0.180   0.091  -0.014   0.005
39    Q         0.647   0.526   0.420   0.957   0.817   0.661   0.659   0.471   0.252
40    T        -1.887  -1.828  -1.679  -2.073  -2.015  -1.768  -1.501  -1.448  -1.229
41    L         0.647   0.677   0.433   0.329   0.363   0.027   0.659   0.706   0.275
42    Y         0.647   0.526   0.420   0.646   0.490   0.318   0.659   0.471   0.252
43    A        -1.441  -1.408  -1.341  -1.546  -1.579  -1.438  -1.273  -1.245  -1.097
44    L        -0.655  -0.629  -0.848  -0.863  -0.836  -1.134  -0.591  -0.556  -0.802
45    V         1.350   1.373   1.467   1.374   1.405   1.556   1.455   1.489   1.638
46    F         0.055   0.072   0.234  -0.319  -0.292  -0.034  -0.364  -0.341  -0.099
47    I        -0.470  -0.388  -0.403  -0.690  -0.543  -0.573  -0.705  -0.593  -0.573
48    T        -0.024  -0.055  -0.302   0.204   0.165  -0.148  -0.023  -0.062  -0.419
49    R         1.350   1.373   1.467   1.507   1.533   1.681   1.455   1.489   1.638
50    Y         1.350   1.373   1.467   1.266   1.299   1.454   1.455   1.489   1.638
51    L         0.647   0.617   0.427   0.390   0.350   0.161   0.659   0.614   0.264
52    D         0.300   0.253   0.274   0.499   0.425   0.417   0.091   0.001  -0.021
53    L         1.350   1.373   1.467   0.969   0.991   1.175   1.455   1.489   1.638
54    L         0.300   0.337   0.316   0.053   0.118  -0.004   0.091   0.151   0.058
55    T        -0.331  -0.414  -0.403  -0.223  -0.341  -0.317  -0.477  -0.596  -0.570
56    F        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
57    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
58    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
59    -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
60    H        -1.175  -1.112  -0.977  -1.010  -0.925  -0.741  -1.218  -1.153  -0.947
61    W        -1.441  -1.406  -1.327  -1.298  -1.253  -1.145  -1.273  -1.230  -1.085
62    V        -1.563  -1.541  -1.360  -1.486  -1.441  -1.195  -1.387  -1.358  -1.114
63    S         0.647   0.617   0.427   0.754   0.726   0.475   0.659   0.614   0.264
64    L        -0.331  -0.336  -0.385  -0.747  -0.766  -0.812  -0.477  -0.485  -0.545
65    Y         1.350   1.373   1.467   1.266   1.299   1.454   1.455   1.489   1.638
66    N        -0.024  -0.137  -0.311   0.266   0.105  -0.274  -0.023  -0.179  -0.432
67    A        -1.887  -1.842  -1.680  -1.852  -1.787  -1.569  -1.501  -1.458  -1.230
68    L        -0.655  -0.590  -0.839  -0.876  -0.793  -1.144  -0.591  -0.507  -0.790
69    M        -0.024   0.051  -0.287   0.274   0.378  -0.215  -0.023   0.082  -0.398
70    K         0.647   0.526   0.420   0.826   0.682   0.529   0.659   0.471   0.252
71    I         0.300   0.317   0.300  -0.056  -0.027  -0.140   0.091   0.117   0.027
72    F        -0.671  -0.663  -0.477  -1.076  -1.069  -0.800  -0.932  -0.917  -0.665
73    F         0.647   0.617   0.427   0.656   0.628   0.337   0.659   0.614   0.264
74    I         0.647   0.617   0.427   0.506   0.470   0.137   0.659   0.614   0.264
75    V        -1.441  -1.388  -1.332  -1.251  -1.179  -1.113  -1.273  -1.215  -1.089
76    S         0.647   0.617   0.427   0.732   0.702   0.424   0.659   0.614   0.264
77    T        -0.024  -0.102  -0.305   0.164   0.073  -0.216  -0.023  -0.134  -0.424
78    A        -1.441  -1.477  -1.342  -1.396  -1.455  -1.253  -1.273  -1.299  -1.098
79    Y         1.350   1.373   1.467   1.266   1.299   1.454   1.455   1.489   1.638
80    I        -0.470  -0.435  -0.408  -0.725  -0.678  -0.590  -0.705  -0.662  -0.583
81    V        -0.470  -0.551  -0.420  -0.607  -0.692  -0.478  -0.705  -0.788  -0.597
82    V        -0.331  -0.215  -0.366  -0.350  -0.195  -0.368  -0.477  -0.320  -0.516
83    L        -0.024   0.118  -0.285  -0.276  -0.098  -0.646  -0.023   0.171  -0.395
84    L         0.300   0.337   0.316   0.331   0.387   0.246   0.091   0.151   0.058
85    Q        -2.211  -2.208  -1.976  -1.978  -2.052  -1.676  -1.614  -1.604  -1.329
86    G        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
87    S        -1.563  -1.575  -1.365  -1.451  -1.430  -1.163  -1.387  -1.386  -1.118
88    K        -0.024  -0.124  -0.316   0.210   0.074  -0.228  -0.023  -0.163  -0.440
89    R        -1.239  -1.280  -1.310  -1.127  -1.230  -1.276  -1.046  -1.086  -1.066
90    T        -0.916  -0.936  -0.911  -0.740  -0.776  -0.751  -0.932  -0.956  -0.880
91    N        -0.592  -0.573  -0.449  -0.430  -0.393  -0.247  -0.819  -0.794  -0.628
92    T        -0.995  -0.960  -0.921  -0.808  -0.767  -0.688  -1.046  -1.006  -0.893
93    I        -1.239  -1.328  -1.318  -1.113  -1.237  -1.190  -1.046  -1.135  -1.073
94    A        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
95    Y        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
96    N        -1.117  -1.085  -0.964  -0.837  -0.798  -0.631  -1.160  -1.132  -0.936
97    E        -1.239  -1.328  -1.318  -0.680  -0.809  -0.810  -1.046  -1.135  -1.073
98    M        -1.765  -1.773  -1.676  -1.120  -1.142  -1.017  -1.387  -1.391  -1.225
99    L         0.114   0.106   0.241  -0.456  -0.496  -0.297  -0.250  -0.273  -0.087
100   M        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
101   H        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
102   D         1.350   1.373   1.467   1.549   1.583   1.720   1.455   1.489   1.638
103   T        -0.655  -0.576  -0.843  -0.360  -0.261  -0.604  -0.591  -0.489  -0.796
104   F         1.350   1.373   1.467   1.279   1.316   1.466   1.455   1.489   1.638
105   K        -0.916  -0.942  -0.911  -0.634  -0.656  -0.602  -0.932  -0.943  -0.875
106   I        -0.916  -0.939  -0.909  -1.013  -1.031  -1.083  -0.932  -0.949  -0.876
107   Q        -1.117  -1.071  -0.963  -0.876  -0.818  -0.658  -1.160  -1.118  -0.934
108   H        -0.024   0.053  -0.291   0.083   0.183  -0.275  -0.023   0.085  -0.405
109   L         0.647   0.526   0.420   0.329   0.156   0.005   0.659   0.471   0.252
110   L        -0.592  -0.537  -0.452  -1.137  -1.055  -0.904  -0.819  -0.739  -0.631
111   I        -0.916  -0.853  -0.911  -0.773  -0.681  -0.818  -0.932  -0.858  -0.879
112   G        -0.470  -0.451  -0.411  -0.364  -0.337  -0.280  -0.705  -0.681  -0.586
113   S        -0.671  -0.628  -0.473  -0.630  -0.555  -0.351  -0.932  -0.876  -0.660
114   A        -1.441  -1.392  -1.330  -1.543  -1.447  -1.437  -1.273  -1.216  -1.087
115   L         0.055   0.082   0.238  -0.465  -0.394  -0.142  -0.364  -0.320  -0.091
116   M        -0.331  -0.280  -0.380  -0.595  -0.544  -0.591  -0.477  -0.414  -0.538
117   S        -0.470  -0.451  -0.414  -0.538  -0.523  -0.419  -0.705  -0.689  -0.591
118   V        -0.655  -0.604  -0.848  -0.890  -0.825  -1.184  -0.591  -0.523  -0.801
119   F        -0.655  -0.604  -0.848  -0.720  -0.637  -1.076  -0.591  -0.523  -0.801
120   F        -0.024  -0.124  -0.316  -0.011  -0.150  -0.531  -0.023  -0.163  -0.440
121   H        -1.117  -1.078  -0.958  -0.861  -0.796  -0.622  -1.160  -1.116  -0.928
122   H        -0.916  -1.017  -0.927  -0.646  -0.787  -0.708  -0.932  -1.031  -0.896
123   K        -1.441  -1.488  -1.347  -1.156  -1.229  -1.014  -1.273  -1.311  -1.102
124   F         0.114   0.148   0.256  -0.199  -0.139   0.009  -0.250  -0.193  -0.057
125   T        -0.995  -0.968  -0.923  -0.928  -0.883  -0.760  -1.046  -1.008  -0.894
126   F         0.300   0.263   0.281   0.117   0.052   0.013   0.091   0.020  -0.009
127   L        -1.441  -1.451  -1.340  -1.598  -1.627  -1.407  -1.273  -1.269  -1.095
128   E        -1.239  -1.337  -1.314  -0.695  -0.822  -0.829  -1.046  -1.144  -1.069
129   L         0.300   0.337   0.316  -0.056   0.009  -0.101   0.091   0.151   0.058
130   A        -1.765  -1.681  -1.657  -1.645  -1.562  -1.396  -1.387  -1.302  -1.210
131   W         0.647   0.663   0.434   0.991   1.018   0.679   0.659   0.686   0.277
132   S        -0.024  -0.124  -0.316   0.137   0.003  -0.290  -0.023  -0.163  -0.440
133   F         1.350   1.373   1.467   1.279   1.316   1.466   1.455   1.489   1.638
134   S         1.350   1.373   1.467   1.341   1.376   1.524   1.455   1.489   1.638
135   V        -1.117  -1.130  -0.970  -1.518  -1.534  -1.210  -1.160  -1.169  -0.942
136   W         1.350   1.373   1.467   1.593   1.626   1.762   1.455   1.489   1.638
137   L         1.350   1.373   1.467   0.969   0.991   1.175   1.455   1.489   1.638
138   E         1.350   1.373   1.467   1.558   1.592   1.728   1.455   1.489   1.638
139   S        -0.024  -0.005  -0.297   0.189   0.222  -0.154  -0.023   0.004  -0.412
140   V         0.647   0.617   0.427   0.765   0.730   0.454   0.659   0.614   0.264
141   A         0.300   0.346   0.301   0.289   0.356   0.242   0.091   0.167   0.031
142   I         1.350   1.373   1.467   1.171   1.209   1.365   1.455   1.489   1.638
143   L         0.647   0.663   0.434   0.390   0.405   0.170   0.659   0.686   0.277
144   P         1.350   1.373   1.467   1.578   1.611   1.748   1.455   1.489   1.638
145   Q         1.350   1.373   1.467   1.534   1.569   1.706   1.455   1.489   1.638
146   L         1.350   1.373   1.467   0.969   0.991   1.175   1.455   1.489   1.638
147   Y         0.300   0.369   0.306   0.148   0.265   0.114   0.091   0.207   0.040
148   M         0.300   0.397   0.340   0.391   0.552   0.384   0.091   0.256   0.103
149   L         1.350   1.373   1.467   0.969   0.991   1.175   1.455   1.489   1.638
150   S        -0.331  -0.276  -0.378  -0.155  -0.068  -0.268  -0.477  -0.400  -0.532
151   K         0.055   0.075   0.235  -0.043  -0.014   0.229  -0.364  -0.334  -0.097
152   G        -0.331  -0.352  -0.396  -0.301  -0.360  -0.410  -0.477  -0.525  -0.562
153   G         1.350   1.373   1.467   1.468   1.501   1.645   1.455   1.489   1.638
154   K        -0.470  -0.481  -0.417  -0.341  -0.336  -0.241  -0.705  -0.704  -0.592
155   T         0.300   0.256   0.280   0.294   0.208   0.207   0.091   0.007  -0.010
156   R        -0.655  -0.589  -0.852  -0.207  -0.116  -0.530  -0.591  -0.506  -0.806
157   S        -1.441  -1.429  -1.343  -1.138  -1.139  -1.030  -1.273  -1.260  -1.100
158   L         0.114   0.174   0.266  -0.532  -0.434  -0.280  -0.250  -0.145  -0.038
159   T         1.350   1.373   1.467   1.356   1.385   1.539   1.455   1.489   1.638
160   V        -1.239  -1.311  -1.309  -1.044  -1.163  -1.212  -1.046  -1.119  -1.064
161   H         1.350   1.373   1.467   1.587   1.619   1.756   1.455   1.489   1.638
162   Y         1.350   1.373   1.467   1.266   1.299   1.454   1.455   1.489   1.638
163   I         0.647   0.526   0.420   0.506   0.335   0.123   0.659   0.471   0.252
164   F         0.647   0.617   0.427   0.676   0.648   0.382   0.659   0.614   0.264
165   A         1.350   1.373   1.467   1.399   1.425   1.579   1.455   1.489   1.638
166   M         0.300   0.256   0.280  -0.053  -0.126  -0.032   0.091   0.007  -0.010
167   G         0.647   0.526   0.420   0.903   0.765   0.629   0.659   0.471   0.252
168   L        -0.331  -0.291  -0.365  -0.766  -0.689  -0.788  -0.477  -0.401  -0.512
169   Y         1.350   1.373   1.467   1.266   1.299   1.454   1.455   1.489   1.638
170   R         1.350   1.373   1.467   1.507   1.533   1.681   1.455   1.489   1.638
171   A        -0.024  -0.061  -0.301   0.210   0.153  -0.185  -0.023  -0.081  -0.418
172   L         1.350   1.373   1.467   0.969   0.991   1.175   1.455   1.489   1.638
173   Y         1.350   1.373   1.467   1.266   1.299   1.454   1.455   1.489   1.638
174   I         1.350   1.373   1.467   1.171   1.209   1.365   1.455   1.489   1.638
175   P         0.647   0.617   0.427   0.918   0.877   0.517   0.659   0.614   0.264
176   N         0.647   0.526   0.420   0.974   0.835   0.677   0.659   0.471   0.252
177   W         1.350   1.373   1.467   1.593   1.626   1.762   1.455   1.489   1.638
178   I         0.647   0.748   0.441   0.506   0.648   0.164   0.659   0.810   0.289
179   W         0.114   0.148   0.256  -0.028   0.021   0.194  -0.250  -0.193  -0.057
180   R         1.350   1.373   1.467   1.507   1.533   1.681   1.455   1.489   1.638
181   Y        -0.024  -0.178  -0.321   0.012  -0.208  -0.474  -0.023  -0.234  -0.447
182   S        -1.765  -1.812  -1.677  -1.549  -1.603  -1.431  -1.387  -1.422  -1.226
183   T        -1.239  -1.231  -1.292  -0.990  -0.996  -1.102  -1.046  -1.037  -1.049
184   E         0.647   0.526   0.420   0.980   0.840   0.682   0.659   0.471   0.252
185   D        -1.441  -1.451  -1.340  -1.010  -1.015  -0.865  -1.273  -1.269  -1.095
186   K        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
187   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
188   K        -0.331  -0.260  -0.373  -0.162  -0.070  -0.202  -0.477  -0.382  -0.526
189   L        -1.239  -1.323  -1.316  -1.223  -1.346  -1.456  -1.046  -1.130  -1.071
190   D        -0.024  -0.178  -0.321   0.340   0.126  -0.131  -0.023  -0.234  -0.447
191   K        -1.441  -1.481  -1.348  -1.446  -1.498  -1.372  -1.273  -1.299  -1.103
192   I        -0.671  -0.646  -0.473  -1.155  -1.094  -0.857  -0.932  -0.895  -0.661
193   A         0.300   0.364   0.310   0.289   0.386   0.260   0.091   0.200   0.048
194   F        -0.470  -0.552  -0.420  -0.646  -0.767  -0.584  -0.705  -0.789  -0.597
195   F        -1.441  -1.439  -1.342  -1.779  -1.785  -1.590  -1.273  -1.258  -1.097
196   A        -0.331  -0.345  -0.383  -0.255  -0.270  -0.339  -0.477  -0.485  -0.539
197   G         1.350   1.373   1.467   1.468   1.501   1.645   1.455   1.489   1.638
198   L        -0.995  -0.957  -0.928  -1.468  -1.382  -1.301  -1.046  -0.996  -0.899
199   L        -0.331  -0.275  -0.372  -0.643  -0.532  -0.738  -0.477  -0.388  -0.526
200   Q         1.350   1.373   1.467   1.534   1.569   1.706   1.455   1.489   1.638
201   T         1.350   1.373   1.467   1.356   1.385   1.539   1.455   1.489   1.638
202   L        -0.916  -0.868  -0.917  -1.171  -1.136  -1.089  -0.932  -0.902  -0.886
203   L        -0.671  -0.654  -0.477  -1.205  -1.207  -0.912  -0.932  -0.907  -0.665
204   Y         1.350   1.373   1.467   1.266   1.299   1.454   1.455   1.489   1.638
205   S        -0.024  -0.124  -0.316   0.149   0.023  -0.265  -0.023  -0.163  -0.440
206   D         1.350   1.373   1.467   1.549   1.583   1.720   1.455   1.489   1.638
207   F         1.350   1.373   1.467   1.279   1.316   1.466   1.455   1.489   1.638
208   F         0.647   0.526   0.420   0.676   0.529   0.371   0.659   0.471   0.252
209   Y        -0.024  -0.124  -0.316   0.100  -0.033  -0.276  -0.023  -0.163  -0.440
210   I         0.114   0.091   0.239  -0.232  -0.270  -0.032  -0.250  -0.302  -0.090
211   Y         1.350   1.373   1.467   1.266   1.299   1.454   1.455   1.489   1.638
212   Y         0.647   0.526   0.420   0.679   0.534   0.398   0.659   0.471   0.252
213   T        -1.239  -1.337  -1.314  -0.913  -1.051  -1.017  -1.046  -1.144  -1.069
214   K        -0.331  -0.309  -0.388  -0.233  -0.239  -0.324  -0.477  -0.474  -0.548
215   V         0.647   0.663   0.434   0.739   0.764   0.406   0.659   0.686   0.277
216   I        -1.117  -1.121  -0.969  -1.299  -1.375  -1.139  -1.160  -1.159  -0.941
217   R        -0.916  -0.936  -0.911  -0.649  -0.676  -0.618  -0.932  -0.956  -0.880
218   -        -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000  -1.000     *
219   G         1.350   1.373   1.467   1.468   1.501   1.645   1.455   1.489   1.638
220   K        -1.239  -1.184  -1.286  -0.925  -0.849  -1.033  -1.046  -0.982  -1.042
221   G        -0.916  -0.809  -0.901  -0.669  -0.529  -0.619  -0.932  -0.808  -0.866
222   F         0.647   0.695   0.433   0.615   0.687   0.250   0.659   0.732   0.275
223   K        -0.592  -0.609  -0.474  -0.455  -0.487  -0.323  -0.819  -0.842  -0.660
224   L         1.350   1.373   1.467   0.969   0.991   1.175   1.455   1.489   1.638
225   P         1.350   1.373   1.467   1.578   1.611   1.748   1.455   1.489   1.638
226   K        -0.916  -0.967  -0.922  -0.765  -0.836  -0.758  -0.932  -0.980  -0.889
* gap fraction no less than  0.50; conservation set to M-S
  M: mean;  S: standard deviation

al2co - The parameters are:

Input alignment file - ../mafft-mac/clustal/P18414
Output conservation file - output/P18414
All 9 methods are used - true 
   1. unweighted entropy measure; 2. Henikoff entropy measure;
   3. independent count entropy measure;
   4. unweighted variance measure; 5. Henikoff variance measure;
   6. independent count variance measure;
   7. unweighted matrix-based sum-of-pairs measure;
   8. Henikoff matrix-based sum-of-pairs measure;
   9. independent count matrix-based sum-of-pairs measure;
Window size - 1
Conservation normalized to zero mean and unity variance
Gap fraction to suppress calculation -  0.50
