Gene Set Collections
GO; KEGG, NCI, Reactome-Top Pathways; PFAM Domains
- GO, KEGG, PFAM from Bioconductor; NCI from web-site; Reactome top pathways from web-site
- filtered max 700 min 5
- used in CNV-Nature analysis (3,493 sets effectively tested)
- 6129 sets
GO; KEGG, NCI, Biocarta, Reactome-All Pathways, PFAM Domains
GO, KEGG, PFAM from Bioconductor; NCI from web-site; Reactome, Biocarta from WhichGenes
- not filtered
- 15640 sets