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| ||<style="text-align: center;">{{attachment:CIFAR.jpg||width=150}}||[[https://cifar.ca/|CIFAR]]||The Multiscale Human  <<BR>><<BR>>Funding acknowledgement: Gary Bader is a CIFAR Fellow in the MacMillan Multiscale Human Program.<<BR>> PI: Gary Bader||2023-2028|| ||<style="text-align: center;">{{attachment:nih.gif}}||[[http://www.nih.gov/|U.S. NIH]]||Cytoscape: An Ecosystem for Network Genomics <<BR>><<BR>> PI: Trey Ideker||2022-2027|| ||<style="text-align:center;">{{attachment:CIHR.jpg}}||[[ http://www.cihr-irsc.gc.ca/|Canadian Institutes of Health Research]] ||Cellular ecosystem modelling of liver cancer <<BR>><<BR>>PI: Gary Bader||2022-2027|| ||<style="text-align:center;">{{attachment:NSERC.png||width=200}}||[[http://www.nserc-crsng.gc.ca/|Natural Sciences and Engineering Research Council of Canada]]||Mathematical modelling of tissue development <<BR>><<BR>>Pl: Gary Bader||2022-2027|| ||<style="text-align: center;">{{attachment:CZI.png||width=150}}||[[ https://chanzuckerberg.com/ |Chan Zuckerberg Initiative]]||Deciphering the Cellular Ecosystem of Primary Sclerosing Cholangitis <<BR>><<BR>> PI: Sonya MacParland||2022-2025|| ||<style="text-align: center;">{{attachment:Brain.jpg||width=150}}||[[https://braincanada.ca/|Brain Canada Foundation]]||[[https://www.pmgenomics.ca/pmgenomics/bsci.html|The Brain Single Cell Initiative]] <<BR>><<BR>> PI: Trevor Pugh||2022-2025|| ||<style="text-align:center;">{{attachment:OICR.jpeg||width=150}}||[[ https://oicr.on.ca/ |Ontario Institute for Cancer Research]]||Probing the developmental origins of pediatric cerebellar brain cancers using single cell profiling <<BR>><<BR>>PI: Lincoln Stein||2021-2026|| ||<style="text-align:center;">{{attachment:MGH.jpg||width=200}}||[[https://www.massgeneral.org/research|Massachusetts General Hospital]]||Single Cell Atlas of Human Pediatric Livers Across Diverse Ancestry <<BR>><<BR>>PI: Alan Mullen||2021-2024|| ||<style="text-align:center;">{{attachment:NewTerryFox.jpg||width=250}}||[[http://www.tfri.ca/|The Terry Fox Research Institute]]|| The Terry Fox New Frontiers Program Project Grant in the Determinants of stemness that underlie high risk or relapse disease <<BR>><<BR>>Pl: John Dick||2020-2026||  | 
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| ||<style="text-align: center;">{{attachment:nih.gif}}||[[http://www.nih.gov/|U.S. NIH]] via [[http://www.nigms.nih.gov/|National Institute of General Medical Sciences (NIGMS)]]||[[http://www.cytoscape.org/|Cytoscape: A Modeling Platform for Biomolecular Networks]]<<BR>><<BR>>Funding for continued development and maintenance of Cytoscape is provided by the U.S. National Human Genome Research Institute (NHGRI) under award number HG009979.<<BR>><<BR>>Cytoscape user support, education and new initiatives are supported by the National Resource for Network Biology (NRNB) under award numbers P41 RR031228 and GM103504.<<BR>><<BR>>PIs: Trey Ideker, Gary Bader.||2004-2021|| | ||<style="text-align: center;">{{attachment:nih.gif}}||[[http://www.nih.gov/|U.S. NIH]] via [[http://www.nigms.nih.gov/|National Institute of General Medical Sciences (NIGMS)]]||[[http://www.cytoscape.org/|Cytoscape: A Modeling Platform for Biomolecular Networks]]<<BR>><<BR>>Funding for continued development and maintenance of Cytoscape is provided by the U.S. National Human Genome Research Institute (NHGRI) under award number HG009979.<<BR>><<BR>>Cytoscape user support, education and new initiatives are supported by the National Resource for Network Biology (NRNB) under award numbers P41 RR031228 and GM103504.<<BR>><<BR>>PIs: Trey Ideker, Gary Bader.||2004-2027|| | 
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| ||<style="text-align:center;">{{attachment:CZI.png||width=150}}||[[ https://chanzuckerberg.com/ |Chan Zuckerberg Initiative]]||A reference cell atlas of human liver diversity of a lifespan <<BR>><<BR>> Acknowledgement text "This project has been made possible in part by a grant from the Chan Zuckerberg Initiative DAF, an advised fund of Silicon Valley Community Foundation."<<BR>><<BR>> PI: Alan Mullen ||2019-2021|| | ||<style="text-align:center;">{{attachment:CZI.png||width=150}}||[[ https://chanzuckerberg.com/ |Chan Zuckerberg Initiative]]||A reference cell atlas of human liver diversity over a lifespan <<BR>><<BR>> Acknowledgement text "This project has been made possible in part by a grant from the Chan Zuckerberg Initiative DAF, an advised fund of Silicon Valley Community Foundation."<<BR>><<BR>> PI: Alan Mullen ||2019-2021|| | 
Funding Agency  | 
  Title  | 
  Grant Period  | 
|
  | 
  The Multiscale Human    | 
  2023-2028  | 
|
  | 
  Cytoscape: An Ecosystem for Network Genomics    | 
  2022-2027  | 
|
  | 
  Cellular ecosystem modelling of liver cancer   | 
  2022-2027  | 
|
  | 
  Mathematical modelling of tissue development     | 
  2022-2027  | 
|
  | 
  Deciphering the Cellular Ecosystem of Primary Sclerosing Cholangitis     | 
  2022-2025  | 
|
  | 
  The Brain Single Cell Initiative     | 
  2022-2025  | 
|
  | 
  Probing the developmental origins of pediatric cerebellar brain cancers using single cell profiling   | 
  2021-2026  | 
|
  | 
  Single Cell Atlas of Human Pediatric Livers Across Diverse Ancestry     | 
  2021-2024  | 
|
  | 
   The Terry Fox New Frontiers Program Project Grant in the Determinants of stemness that underlie high risk or relapse disease   | 
  2020-2026  | 
|
Reimagining glioblastoma as a consequence of aberrant neural tissue repair    | 
  2020-2024  | 
||
  | 
  National Resource for Network Biology (NRNB), PIs: Trey Ideker, Chris Sander, Alex Pico, Gary Bader.  | 
  2010-2025  | 
|
  | 
  U.S. NIH via National Institute of General Medical Sciences (NIGMS)  | 
  Cytoscape: A Modeling Platform for Biomolecular Networks  | 
  2004-2027  | 
  | 
  Integrated multi-omic delineation of SARS-CoV-2-dysregulated cellular processes    | 
  2020-2021  | 
|
  | 
  AI for Precision Discovery on Associations in Biological Systems    | 
  2020-2021  | 
|
  | 
  A reference cell atlas of human liver diversity over a lifespan     | 
  2019-2021  | 
|
  | 
  Stem cell based approaches to endogenous repair of brain and skeletal muscle   | 
  2019-2020  | 
|
  | 
  Investigating how age-related clonal hematopoiesis drives HSC stemness properties ane how this leads to inflammatory disease of the heart   | 
  2019-2020  | 
|
  | 
  Development of novel cell and tissue therapies to treat liver failure   | 
  2019-2020  | 
|
  | 
  Cellular and Genetic Heterogeneity as a Therapeutic Hurdle and Opportunity for Ontarians with Brain Cancer (Operating Grant)   | 
  2017-2021  | 
|
  | 
  Acute Leukemia Translational Initiative (Operating Grant)   | 
  2017-2021  | 
|
  | 
  The Cancer Genome Collaboratory   | 
  2016-2022  | 
|
  | 
   Cell and tissue communication networks  | 
  2016-2021  | 
|
  | 
  Overcoming Blindness: Differentiation, Purification and Transplantation of Photoreceptors (Operational sub-grant).   | 
  2016-2019  | 
|
  | 
  Regulatory network control of neural stem cells for endogenous repair (Operating Grant: C1TPA-2016-01).   | 
  2016-2019  | 
|
  | 
  Pathways to enhance the clinical utility of hematopoietic stem cell transplantation (Operating Grant: C1TPA-2016-02).   | 
  2016-2019  | 
|
  | 
  From correlation to causation in genomics: identifying mechanisms underlying disease (Foundation Grant)  | 
  2015-2022  | 
|
  | 
   Development of Stemness-based Prognostic Biomarkers and Therapeutic Targets(Operating Grant: 1047)   | 
  2015-2020  | 
|
  | 
   A human binary interactome reference map by 2020 (Operational sub-grant:U41-HG001715-18).   | 
  2015-2018  | 
|
  | 
  Targeting brain tumour stem cell epigenetic and molecular networks (Operating Sub-Grant: SU2C-AACR-DT-19-15)   | 
  2015-2019  | 
|
  | 
  The Cancer Genome Collaboratory (Operating Grant: Discovery Frontiers)   | 
  2014-2018  | 
|
  | 
  Cancer stem cell program (Operating Grant)   | 
  2013-2017  | 
|
  | 
   Personalised Risk Stratification for Prevention and Early Detection of Breast Cancer (Operating Sub-Grant)   | 
  2013-2017  | 
|
  | 
  U.S. NIH via National Human Genome Research Institute (NHGRI)  | 
  Pathway Commons Research resource for biological pathways.   | 
  2008-2018  | 
  | 
   A computational and experimental approach to map and evolutionary analyze protein interactions mediated by peptide recognition domains (Operating Grant MOP-84324)  | 
  2007-2017  | 
|
  | 
  Knowledge-based Gene Expression Analysis for Biomedical and Cancer Research (Operating Sub-Grant: 69119295)   | 
  2006-2017  | 
|














