Table of Contents

TableOfContents()

Goals

• Computationally predict specificity of peptide recognition domain from the primary amino acid sequences
• Analyze PDZ, WW and then SH3 domains

Background

• [wiki:/PDZ PDZ Domains]

• [wiki:/MachineLearning Machine Learning]

Strategy

• [wiki:/Strategy Strategy]

Ideas

• [wiki:/Ideas Ideas]

Data

• [wiki:/PDZData PDZ Data]

Experiments

• [wiki:/Experiments Experiments and Results]

Status

• [wiki:/Log Status]

Tools/Resources

• [wiki:/ToolsResources Tools and Resources]

Reading Notes

• [wiki:/../ShirleyHui/MBCReadings Molecular Biology of the Cell]
• [wiki:/../ShirleyHui/PPIReadings Protein-protein Interaction Detection]
• Support Vector Machines

Related Literature

• [http://www.connotea.org/rss/user/s2hui?download=view Literature List on Connotea]

• [http://www.baderlab.org/DomainSpecificityPredictionProject/Reading Molecular Biology of the Cell]

Team

• Shirley Hui
• Gary Bader

CategoryProject